KEGG   Mus musculus (house mouse): 209387
Entry
209387            CDS       T01002                                 
Symbol
Trim30d, TRIM30-3, Trim79
Name
(RefSeq) tripartite motif-containing 30D
  KO
K10648  tripartite motif-containing protein 5 [EC:2.3.2.27]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03250  Viral life cycle - HIV-1
mmu05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    209387 (Trim30d)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    209387 (Trim30d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mmu04121]
    209387 (Trim30d)
Enzymes [BR:mmu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     209387 (Trim30d)
Ubiquitin system [BR:mmu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    209387 (Trim30d)
SSDB
Motif
Pfam: SPRY DUF6491 U3_assoc_6 Apolipoprotein DUF3584 DUF503 DUF4359 OmpH ATG16 Prominin DUF2120 ATPase_RavA_C
Other DBs
NCBI-GeneID: 209387
NCBI-ProteinID: NP_001161300
MGI: 3035181
Ensembl: ENSMUSG00000057596
UniProt: Q3TNW3
Position
7:complement(104119221..104157062)
AA seq 347 aa
MENEKRCDEWQDDLQQQRADWENQIHSDIEDIQIEFNGLRDLLDSKENEKLQELKKEKEE
VMEKLEESEHELREQRELVRDLISYVQHQLELSVMEMKQGVNYVLTSIQTMTLKQPQIVP
PKRRRGTSKAPHLKGMLQSFEGLMDVQQYWVHMTLHARNNAVIAINKEKRQIQYRSYNTV
PVSEIYHLGVLGYPALSSGKHYWEVDISRSDAWLLGLNDGKCAQPQLHSKEEMGIKKKYH
SHIKQNVTFQPKCGYWVIGMKNSSVYNAFDECSITHNSSVLALSLPDRPSRVGVFLDQEV
CTLSFYDVSNSGALIYRFYDPSFPVEVYPYFNPMECSEPMTVCGPPS
NT seq 1044 nt   +upstreamnt  +downstreamnt
atggaaaatgagaaaagatgtgatgaatggcaggatgaccttcagcaacagagagctgac
tgggagaaccaaatacacagtgatatagaagacattcagatagagtttaatggactaaga
gacctcctagactccaaggagaatgagaagctgcaggagctgaagaaagagaaggaagag
gttatggaaaagctggaagagtctgaacatgagctaagggagcagagggagttggtgaga
gacctcatctcatatgttcagcatcagttggagctgtcagtcatggaaatgaagcagggt
gtaaattatgtcctgacaagcattcagaccatgacactgaagcagccccaaatagttccc
ccaaaaagaagaagaggaacatccaaagctccacatttgaaaggcatgctacagtcattt
gaagggctcatggatgttcagcaatactgggttcatatgactctacatgcaaggaacaat
gcagtcattgccattaacaaagaaaaaagacaaatacagtatagaagttacaatacggtt
ccagtttctgagatctaccatttgggtgtcctgggatatccagctctttcctcagggaag
cattactgggaagtagacatatctagaagtgatgcctggctcctcggattaaatgacgga
aagtgtgctcaaccccaacttcactcaaaggaagaaatgggcatcaaaaaaaaatatcat
tctcatattaaacaaaatgtaacgtttcagcctaaatgtggctactgggttatagggatg
aagaattcatctgtatacaatgcctttgatgagtgttctatcacccacaattccagtgtc
ttggccctctctctgcctgatcgtcccagtcgtgtaggagttttcctggaccaggaagtt
tgcactctctcattttatgatgtttctaactctggagctctcatctatagattctatgac
ccttccttccctgttgaagtctatccatattttaatcctatggaatgttcagagccaatg
acagtatgcggaccaccatcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (14)   
   RefSeq(nuc) (6)   
   GenBank (4)   
   EMBL (4)   
Protein domain (12)   
   Pfam (12)   
All databases (53)   

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