KEGG   Mus musculus (house mouse): 20957
Entry
20957             CDS       T01002                                 
Symbol
Sycp1, SCP1
Name
(RefSeq) synaptonemal complex protein 1
  KO
K19533  synaptonemal complex protein 1
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    20957 (Sycp1)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Meiosis-specific proteins
   Synaptonemal complex
    20957 (Sycp1)
SSDB
Motif
Pfam: SCP-1 ERM_helical DUF6452
Other DBs
NCBI-GeneID: 20957
NCBI-ProteinID: NP_035646
MGI: 105931
Ensembl: ENSMUSG00000027855
UniProt: Q62209
Position
3:complement(102725815..102843416)
AA seq 993 aa
MEKQKPFTLFVPPRLSSSQVSAVKPQTAGGDSNYFKTANKCTEGDFGVPFTMSSRENIDK
DPAFQKLSILPMLEQVANSGSCHYQEGVNDSDFENSEPMSRLYSKLYKEAEKIKKWKVSI
ESELKQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNATIHWC
NLLKETCARSAEKTNKYEYEREETRQVYVDLNSNIEKMILAFEELRVQAENARLEMHFKL
KEDHEKIQHLEEEYQKEVNNKENQVSELLIQSAEKENKMKDLTFLLEESRDKANQLEEKT
KLQDENLKELSEKKDHLTSELEDIKMSMQRSMSTQKALEEDLQIATKTISQLTEVKEAQM
EELNKAKTTHSFVVTELKATTCTLEELLRTEQQRLEKNEDQLKLITVELQKKSNELEEMT
KFKNNKEVELEELKNILAEDQKLLDEKKQVEKLAEELQEKEQELTFLLETREKEVHDLQE
QVTVTKTSEQHYLKQVEEMKTELEKEKLKNTELTASCDMLLLENKKFVQEASDMALELKK
HQEDIINCKKQEERLLKQIENLEEKEMHLRDELESVRKEFIQQGDEVKCKLDKSEENARS
IECEVLKKEKQMKILESKCNNLKKQVENKSKNIEELHQENKTLKKKSSAEIKQLNAYEIK
VSKLELELESTKQRFEEMTNNYQKEIENKKISEGKLLGEVEKAKATVDEAVKLQKEIDLR
CQHKIAEMVALMEKHKHQYDKIVEERDSELGLYKNREQEQSSAKIALETELSNIRNELVS
LKKQLEIEKEEKEKLKMAKENTAILKDKKDKKIQASLLESPEATSWKFDSKTTPSQNISR
LSSSMDSGKSKDNRDNLRASAKSILPTTVTKEYTVKTPTKKSIYQRENKYIPTGGSNKKR
KTAFEFDVNSDSSETADLLSLVSEEDVSNRLYDNNPPDSHLLVKTPKQTPLSLSTPASFM
KFGSLKKMREDRWTTIAKIDRKRRLKEAEKLFS
NT seq 2982 nt   +upstreamnt  +downstreamnt
atggagaagcaaaagcccttcacactgttcgtcccgccgaggctgagcagcagtcaagtg
tccgccgtgaaaccgcagacggcgggaggagactccaactacttcaagactgccaacaaa
tgtacagaaggtgattttggtgttccatttacaatgtccagtcgggaaaacattgataaa
gatcctgcttttcaaaaacttagtattttgcccatgctcgaacaggttgctaattctggc
agttgtcactatcaggaaggagtaaatgactctgattttgagaattcagagccaatgagc
agactgtattcaaagctgtataaagaggctgaaaagataaaaaagtggaaagtgagcata
gaatctgaactgaagcagaaagaaaataagttgcaagaaaacagaaagataattgaagcc
cagcgaaaagccattcaggaacttcagtttgaaaatgaaaaagtaagcttgaaattagaa
gaagaaattcaagaaaataaagatttaataaaggagaataatgctacaatacattggtgt
aatctactcaaggaaacctgtgctagatctgcagaaaagacaaataaatatgaatatgag
cgggaagaaaccagacaagtttatgtggatctaaatagcaacattgagaaaatgatacta
gcttttgaggaacttcgtgtgcaagctgagaatgccagactggaaatgcattttaagtta
aaggaagatcatgaaaaaatccaacatcttgaagaagaatatcagaaggaagtaaacaac
aaggaaaatcaggtatcagaactgttgatccaaagtgctgagaaagaaaataaaatgaaa
gatttaacatttctgttagaggaatccagagataaagctaatcaattagaggaaaaaaca
aaattacaagatgaaaacttaaaagaattaagtgaaaagaaggatcatttaacatcagaa
cttgaagatattaaaatgtctatgcaaagaagtatgagcactcagaaagctttagaggaa
gatttgcagatagcaacaaaaacgatttctcagctcactgaagtaaaagaagctcaaatg
gaagaactcaacaaagctaaaactactcactcatttgtggtgactgaacttaaagctact
acatgtaccttggaggaattactgagaacagaacagcaaaggttggaaaaaaatgaagac
caactgaaactgattactgtggaactccagaagaaatcaaatgaactagaagagatgact
aaatttaaaaataacaaagaagtggaacttgaagaattgaaaaacatattggcagaagat
caaaaacttttagatgaaaagaaacaagttgagaagcttgctgaagaattacaagagaaa
gaacaagaactaactttccttttggaaaccagagagaaagaagtccatgatttgcaagaa
caagtaactgtcactaaaacaagtgaacagcattatttaaaacaggttgaagaaatgaaa
actgagcttgaaaaagagaaacttaagaatactgaattaactgcaagttgtgacatgctt
ttgcttgagaacaaaaaatttgtacaagaagcaagtgatatggccctagaactcaagaaa
catcaagaagatatcattaattgcaaaaagcaagaagaaaggctgttgaaacaaatagaa
aatttggaagaaaaagaaatgcatttaagggatgaactggaatcagtaagaaaagagttc
atacagcaaggagatgaagttaagtgtaaattggacaagagtgaagaaaatgctcgaagc
attgaatgtgaagttttaaagaaagaaaagcagatgaagatattagaaagcaagtgtaat
aatttaaagaaacaagttgaaaataaaagcaagaatattgaagagcttcaccaggagaat
aaaaccttgaaaaaaaagagttcagcagaaatcaaacaactgaatgcatatgagataaag
gtcagtaaattagagttggaattagaaagtaccaagcaaagatttgaagaaatgactaac
aattaccagaaggaaattgagaacaaaaagatatcagaaggaaagcttttgggagaggtt
gagaaagccaaagcaacagttgatgaagctgtaaagttacagaaagaaattgatttacga
tgccaacataaaatagctgaaatggtagcacttatggaaaaacataagcaccaatatgat
aagattgttgaagaaagagactcagaattaggactttataaaaacagagagcaagaacag
tcatcagcgaagattgctttggagactgaactatctaatatcagaaatgaacttgtatcc
cttaagaagcaacttgaaatagaaaaagaagaaaaagagaaactaaaaatggcaaaagaa
aacacagctattctcaaagataaaaaagacaagaaaatacaggcatctttactggaatca
cctgaagccactagttggaagtttgattctaaaacaactccttcacaaaatatatctcgg
ctttcctcatcaatggatagtggcaaatccaaagataacagagataatctgcgggcatct
gccaaaagcattttacctacaacagttacaaaggaatatacagtgaagacaccaactaaa
aagagtatatatcaaagagaaaacaagtatatacctactggaggaagtaataaaaagaga
aaaacagcctttgaatttgatgttaattcagatagttcagaaactgctgatctcttgagc
ctggtttcagaggaagatgtatcaaacagactttatgataataatccaccagattctcat
ctattagttaaaacccccaaacagactcctttatcgctatcaactcctgcatcttttatg
aagtttggaagtctgaaaaaaatgagagaggaccgttggacaacgattgctaaaattgat
aggaaaagaagactaaaggaagcagaaaagttattttcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (64)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (55)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (18)   
   RefSeq(nuc) (2)   
   GenBank (8)   
   EMBL (8)   
Protein domain (3)   
   Pfam (3)   
All databases (92)   

Download RDF
DBGET integrated database retrieval system