KEGG   Mus musculus (house mouse): 21341
Entry
21341             CDS       T01002                                 
Symbol
Taf1c, Tafi95, mTAFI95
Name
(RefSeq) TATA-box binding protein associated factor, RNA polymerase I, C
  KO
K15214  TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    21341 (Taf1c)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase I system
   Basal transcription factors
    SL1/TIF-1B
     21341 (Taf1c)
SSDB
Motif
Pfam: TAF1C_HB TAF1C_beta-prop TAF1C_C
Other DBs
NCBI-GeneID: 21341
NCBI-ProteinID: NP_067416
MGI: 109576
Ensembl: ENSMUSG00000031832
UniProt: Q6PDZ2
Position
8:complement(120324713..120331945)
AA seq 836 aa
MDFPGTLRPSLFKAGPLGMTDGPDLSFMCSWRDALTLPGSQPQNCKDPTLSFAKNLLWEP
STPGPLPLLMPPDPDPWDPGVTAQDFLFRGGHCYQYQSQAVLDVTEQLSRFLWDHGDIAF
APLGRLMLENFRLEGNRGYSKKMTIVSAKKLLQDLGGHQPWGCPWASLSRRLRRFSIVGG
PVLSRSVSLLMGKLLHEELAMRWEQLLMDEAFTGGALAWLPGRTARAGQLVYPSGGALDK
LYFQEVSVTSGGNPRILENPGHVQLRGPVRQVVTSTVQGETLLAVRSDYHCATWKIDKQG
PPALLQVMQVEKGATGISLSPHLSGELAICSRSGAVCLWTPQAGLQTIYKDTETLAFRDP
SPWRWADFTAHPRVLTVGDRTGVKMVDIQGPPGCGLLLFRAGAEAACQKGERVLLAQYLG
QPGQTPPSLHLICTQFSIYLMDERLPLVPMLKWDHGLPSAPLLARLLPPASPGHPRPLLL
GGQGGQLQLLHITGEGTSMPQLAGPPQSLPSITESLSAFPLLEPKKQQLLQERLEAPVIG
LAAVPLCASAPGLLLFQLSAAGDVFYQHLRLLQASSPRKVPEQATAPSVDQVSTPSWTPQ
ASARCSRWLEDLMELSPTRPLWVAPTFSHRRFLGHMERQKSQETMPQKLRAAMAKGQLLR
PGDLSTLPRAEPPPAPQCSQQDELTERLTEAWEGRVTAWWRRHRGETSETQTQSKRPKRR
TQLSSTFSSFTSYLDSPDASSAPRSQDLSTSEARLQSPRVPPSQELTQEVWGQGVKRERR
QTLRDHTDKLPLKRDTPGPVATPPSQASSLQTMSFRQQTPVHSGSQPPQKKPRMGF
NT seq 2511 nt   +upstreamnt  +downstreamnt
atggacttccctggcaccctgcgcccttcattgtttaaggccggtccacttggcatgact
gatggccctgacctgtccttcatgtgcagctggagagatgcactgaccctgccagggtcc
cagccacagaactgcaaggatccgaccttgtcctttgccaagaacctactgtgggagcca
tcgacgccaggacccctccccctcctgatgcctcctgatcctgatccctgggaccctggt
gtgacagctcaggacttccttttccggggaggtcactgctaccagtaccagtctcaggct
gtgctggatgtcactgagcagctcagccgcttcctgtgggaccatggggacatagccttc
gcacccctggggagactcatgctggagaacttcagattggaggggaaccggggctactcg
aaaaagatgactatagtcagcgcgaagaagctgcttcaggacctcggcggacaccaaccc
tgggggtgtccctgggcttccctcagccgccggctgcgtcgcttctccatcgttgggggt
cctgtcctgagcaggtcagtgtcactactcatggggaagctactgcatgaagagctggcc
atgcgctgggagcagctgctgatggatgaggccttcaccgggggcgcgttggcctggctg
cccggaaggacagcgcgggccggacagctggtctaccctagtggaggtgccttggacaag
ctgtatttccaggaggtcagtgtgacttcaggtggcaacccccggatccttgagaaccct
gggcacgtccagctgcggggacctgtacggcaggtggtgaccagcaccgtccagggagaa
acgcttctggccgtccgctctgactatcactgtgccacgtggaagattgataagcagggg
ccaccagcactcctgcaggtgatgcaggtggagaaaggggccactggtattagcctcagc
cctcacctgtcaggagagctggccatctgcagccgttccggagctgtttgtctgtggacc
ccacaagctgggctgcagacgatctacaaggacaccgagacgcttgccttccgtgatccg
tctccctggcgctgggcagacttcactgcccacccccgggtgctgactgtgggggaccgc
acgggtgtgaaaatggttgacattcagggcccaccgggctgtgggctgctgctgttccgc
gctggagcagaggctgcctgccagaaaggagagcgggtgctgcttgcccagtacctaggg
cagccaggtcagacccctccatctctgcatctcatctgcacccagttctcgatctacctg
atggatgagcgcctccccctggtgcccatgcttaagtgggaccatggcttgccatctgct
cccctgcttgcccgcctgctacccccagctagccctggccatccacggcccctgctactg
gggggccagggtgggcagctgcagctgcttcatataacaggagagggaacttccatgcca
cagctggcggggcctcctcagtctctgccctccatcaccgaatccctctctgcctttccc
ctgctggaacctaagaagcagcagctgctgcaggaacgtctggaggcaccagtcataggt
ctggctgctgtccccctctgtgcctctgccccggggctgttgctcttccagctctcagca
gccggggatgtcttctaccagcacctacggctcctgcaagcctccagtcctagaaaggtg
ccagagcaagcaacagcaccctcagtggaccaggtgtccacgccctcttggacccctcag
gccagtgcccgttgcagccgctggttggaggacctgatggagttgtcccccactcgtcca
ttgtgggtcgccccgaccttctcccatcgccgttttctgggccacatggagcggcagaag
agccaagagaccatgccacagaagctccgagcagccatggccaagggccagctcctgcgg
cctggggacctgagtacactccccagggcagagccaccccctgcacctcagtgcagccaa
caggatgagctcactgagcgcttgacagaagcctgggaaggccgggtgactgcctggtgg
aggagacatcgaggtgagacctccgagacccagacccagtccaagcggcctaagcggcgg
actcagttgtctagcaccttctcctcattcacaagctacctggactccccagatgccagc
agtgcccctcgtagccaagacctctctacctcagaggcccgtcttcagtcacccagggtt
ccaccctcccaggagttgacacaggaggtgtggggccaaggtgtgaagcgtgaacgccgg
cagaccctccgggatcacacggacaagctgccacttaagagggacactccaggacctgtg
gctacaccaccctcccaggcctctagcctccagaccatgtctttcaggcagcagacgcct
gtccactctggctcccagcctccccagaagaagccacgaatgggcttctga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (29)   
   RefSeq(nuc) (3)   
   GenBank (13)   
   EMBL (13)   
Protein domain (3)   
   Pfam (3)   
All databases (66)   

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