KEGG   Mus musculus (house mouse): 21401
Entry
21401             CDS       T01002                                 
Symbol
Tcea3, S-II, SII-K1
Name
(RefSeq) transcription elongation factor A (SII), 3
  KO
K03145  transcription elongation factor S-II
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    21401 (Tcea3)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     21401 (Tcea3)
SSDB
Motif
Pfam: TFIIS_M TFIIS_C Med26 DBD_Tnp_Mut BAR_4 Auxin_repressed
Other DBs
NCBI-GeneID: 21401
NCBI-ProteinID: NP_035672
MGI: 1196908
Ensembl: ENSMUSG00000001604
UniProt: P23881
Structure
Position
4:135975253..136002214
AA seq 347 aa
MGLEEELLRIAKKLEKMVSRKKTEGALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCS
DKEVVSLAKVLIKNWKRLLDSPRTTKGEREEREKAKKEKGLGCSDWKPEAGLSPPRKKGG
GEPKTRRDSVDSRSSTTSSPKRPSLERSNSSKSKVETPTTPSSPSTPTFAPAVCLLAPCY
LTGDSVRDKCVEMLSAALKAEDNFKDYGVNCDKLASEIEDHIYQELKSTDMKYRNRVRSR
ISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTG
GTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgggcctggaagaggagctgttgaggatcgccaaaaagctggagaagatggtgtcccgg
aagaagacggaaggggccctggaccttctgaagaagctgaacagttgccagatgtccatc
cagctgctacagaccaccaggatcggagtggcagtcaacggagtccgcaagcactgctca
gacaaggaagtggtgtccttggccaaagtcctcattaaaaactggaagcggctgctggac
tcccccagaaccaccaaaggagaaagagaagaaagagaaaaagcgaagaaggagaaagga
cttggctgttcagactggaaaccagaagcaggcctttctccaccaaggaagaaaggaggg
ggagagcccaaaactaggagagactctgtagactccaggtcatccaccacctcctctcca
aaaaggccttcgctggaaagatccaacagcagcaaatctaaagtggaaactcccacgacc
cccagcagcccctcaactcccacctttgcccccgctgtctgtctcctggccccctgctac
ctcaccggggactctgtccgggacaaatgtgtggagatgctgtcagcagctctgaaggca
gaagacaatttcaaggactatggagtcaactgtgacaagctggcctcagaaatagaagac
catatctatcaagaactcaagagcacagacatgaagtaccggaaccgtgtgcgcagccgc
atcagcaacctgaaggaccccaggaacccaggcctgaggcggaatgtgctcagtggggcc
atttccccagagctcattgccaagatgacagcggaggaaatggccagtgatgagctgagg
gagctgaggaacgccatgactcaagaggccatccgtgagcaccagatggcgaagacaggc
ggcaccaccactgacctcttgcggtgtagcaagtgcaagaagaagaattgtacctataac
caggtgcagacacgcagtgctgatgagcccatgaccacttttgtcttatgcaatgaatgt
gggaatcgctggaagttctgctga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (16)   
   RefSeq(nuc) (4)   
   GenBank (6)   
   EMBL (6)   
3D Structure (1)   
   PDB (1)   
Protein domain (6)   
   Pfam (6)   
All databases (70)   

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