KEGG   Mus musculus (house mouse): 21405
Entry
21405             CDS       T01002                                 
Symbol
Hnf1a, HNF1, HNF1-alpha, HNF1[a], Hnf-1, Hnf1alpha, LFB1, Tcf-1, Tcf1
Name
(RefSeq) HNF1 homeobox A
  KO
K08036  transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04950  Maturity onset diabetes of the young
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09160 Human Diseases
  09167 Endocrine and metabolic disease
   04950 Maturity onset diabetes of the young
    21405 (Hnf1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    21405 (Hnf1a)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain POU
    21405 (Hnf1a)
SSDB
Motif
Pfam: HNF-1B_C HNF-1_N HNF-1A_C Homeodomain Telethonin Homeobox_KN
Other DBs
NCBI-GeneID: 21405
NCBI-ProteinID: NP_033353
MGI: 98504
Ensembl: ENSMUSG00000029556
UniProt: P22361 Q66JY7
Structure
Position
5:complement(115087039..115109121)
AA seq 628 aa
MVSKLSQLQTELLAALLESGLSKEALIQALGEPGPYLMVGEGPLDKGESCGGSRGDLTEL
PNGLGETRGSEDDTDDDGEDFAPPILKELENLSPEEAAHQKAVVESLLQEDPWRVAKMVK
SYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQQFTHA
GQGGLIEEPTGDELPTKKGRRNRFKWGPASQQILFQAYERQKNPSKEERETLVEECNRAE
CIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDTYNGPPPGPGPGPALP
AHSSPGLPTTTLSPSKVHGVRYGQSATSEAAEVPSSSGGPLVTVSAALHQVSPTGLEPSS
LLSTEAKLVSATGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPAS
LGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQ
SHVAQSPFMATMAQLQSPHALYSHKPEVAQYTHTSLLPQTMLITDTNLSTLASLTPTKQV
FTSDTEASSEPGLHEPPSPATTIHIPSQDPSNIQHLQPAHRLSTSPTVSSSSLVLYQSSD
SNGHSHLLPSNHSVIETFISTQMASSSQ
NT seq 1887 nt   +upstreamnt  +downstreamnt
atggtttctaagctgagccagctgcagacggagctcctggctgccctgctcgagtctggc
ctgagcaaagaggccctgatccaggccttgggggagccagggccctacctgatggttgga
gagggtcccctggacaagggggagtcctgcggtgggagtcgaggggacctgaccgagttg
cctaatggccttggagaaacgcgtggctctgaagatgacacggatgacgatggggaagac
ttcgcgccacccattctgaaagagctggagaacctcagcccagaggaggcagcccaccag
aaagccgtggtggagtcacttcttcaggaggacccatggcgcgtggcgaagatggtcaag
tcgtacttgcagcagcacaacatcccccagcgggaggtggtggacaccacgggtctcaac
cagtcccacctgtcacagcacctcaacaagggcacacccatgaagacacagaagcgggcc
gctctgtacacctggtacgtccgcaagcagcgagaggtggctcagcaattcacccacgca
gggcagggcggactgattgaagagcccacaggcgatgagctgccaactaagaaggggcgt
aggaaccggttcaagtggggccccgcatcccagcagatcctgttccaggcctacgagagg
caaaaaaaccccagcaaggaagagcgagagaccttggtggaggagtgtaatagggcggag
tgcatccagaggggggtgtcaccatcgcaggcccaggggctaggctccaaccttgtcacg
gaggtgcgtgtctacaactggtttgccaaccggcgcaaggaggaagccttccggcacaag
ttggccatggacacctataacggacctccaccggggccaggcccgggccctgcgctgcct
gctcacagttcccccggcctgcccacaaccaccctctctcccagtaaggtccacggtgta
cggtacggacagtctgcaaccagtgaggcagccgaggtgccctccagcagcggaggtccc
ttagtcacagtgtctgcggccttacaccaagtatcccccacaggcctggagcccagcagc
ctgctgagcacagaggccaagctggtctcagccacggggggtcccctgcctcccgtcagc
accctgacagcactgcacagcttggagcagacatctccgggtctcaaccagcagccgcag
aaccttatcatggcctcgctacctggggtcatgaccatcgggcccggggagcctgcctcc
ctgggacccacgttcacgaacacgggcgcctccaccctggttatcggtctggcctccact
caggcacagagcgtgcctgtcatcaacagcatggggagtagcctgaccacgctgcagccg
gtccagttttcccaaccactgcatccctcctatcagcagcctctcatgccccccgtacag
agccacgtggcccagagccccttcatggcaaccatggcccagctgcagagcccccacgcc
ttatacagccacaagcctgaggtggcccagtacacgcacaccagcctgctcccgcagacc
atgttgatcacagacaccaacctcagcacccttgccagcctcacacccaccaagcaggtc
ttcacctcagacacagaggcctccagtgagcccgggcttcacgagccaccctctccagcc
accaccatccacatccccagccaggacccgtcgaacatccagcacctgcagcctgctcac
cggctcagcaccagtcccacagtgtcctccagcagcctggtgttgtatcagagttccgac
tccaacgggcacagccacctgctgccatccaaccatagtgtcatcgagacttttatctcc
acccagatggcctcctcttcccagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (16)   
   RefSeq(nuc) (2)   
   GenBank (7)   
   EMBL (7)   
3D Structure (5)   
   PDB (5)   
Protein domain (6)   
   Pfam (6)   
All databases (53)   

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