KEGG   Mus musculus (house mouse): 21429
Entry
21429             CDS       T01002                                 
Symbol
Ubtf, A930005G04Rik, NOR-90, Tcfubf, UBF, UBF-1, UBF1
Name
(RefSeq) upstream binding transcription factor, RNA polymerase I
  KO
K09273  upstream-binding transcription factor
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    21429 (Ubtf)
   03021 Transcription machinery [BR:mmu03021]
    21429 (Ubtf)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   UBF
    21429 (Ubtf)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    UBF
     21429 (Ubtf)
SSDB
Motif
Pfam: HMG_box_5 HMG_box HMG_box_2 DUF4473 NDUF_C2
Other DBs
NCBI-GeneID: 21429
NCBI-ProteinID: NP_001037848
MGI: 98512
Ensembl: ENSMUSG00000020923
UniProt: A2AWT6
Position
11:complement(102195393..102214738)
AA seq 727 aa
MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAF
KDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYF
RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR
EDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDEIMRDYIQKHPELNISEEGI
TKSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQ
KEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQ
EGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK
AREAALKAQSERKPGGEREDRGKLPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEM
TWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQK
FSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKSL
SPQDRAAYKEYISNKRKNMTKLRGPNPKSSRTTLQSKSESEEDDDEEEEDDEEEEEEEDD
ENGDSSEDGGDSSESSSEDESEDGDENDDDDDDEDDEDDDDEDEDNESEGSSSSSSSSGD
SSDSDSN
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgaacggagaagcggactgtcccacagacctggaaatggccgcccccaaaggccaagac
cgctggtcccaggaagatatgctgactctgctggaatgcatgaagaacaacctcccatcc
aacgacagctccaagttcaaaaccacagagtcgcacatggattgggaaaaagttgcgttt
aaggatttttcaggagatatgtgcaagctcaaatgggtggagatttctaacgaggtaagg
aagttccgtacattgacagaattgatccttgatgctcaggaacatgttaaaaacccttac
aaaggcaaaaagctcaagaaacacccggattttccaaagaaacctctcaccccttacttc
cgcttcttcatggagaagcgggccaagtacgcgaagctccacccggagatgagcaacctg
gacctgactaagatcctgtctaagaaatacaaggaacttccagagaagaagaagatgaaa
tatattcaggacttccagagggagaaacaggagttcgagcgaaacctggcccgattcagg
gaggatcaccctgaccttatccagaatgccaagaagtcggacatccccgagaaacccaaa
actccccagcaactgtggtacacccacgagaagaaggtgtatctcaaagtgcggccggat
gagattatgcgggactatatccagaagcaccctgagctgaacatcagtgaggaaggcatc
accaagtccaccctcaccaaggccgagcgccagctcaaggacaagttcgatgggcgacct
accaagccgcctccgaacagctactccctgtactgtgcggagctcatggccaacatgaag
gatgtgcccagcacagagcgcatggtgctatgcagccagcaatggaagctgctctctcag
aaggagaaggatgcctatcacaagaaatgtgaccagaaaaagaaagattatgaggtagag
ctgctgcggttccttgagagcttgccggaggaagagcagcagcgggttctgggggaggag
aagatgctgaacatcaataagaagcaaaccaccagtccggcctccaagaagccttcacag
gaaggtggcaagggtggctccgagaagcccaagcggcctgtgtctgctatgttcatcttc
tctgaggagaagcgaaggcagctacaggaggaacgacctgagctctccgaaagcgaactg
acccgccttctggcccgcatgtggaacgacttgtccgagaagaagaaggctaaatacaag
gcccgggaggctgcgctgaaggcgcagtctgagaggaagccgggcggggagcgtgaagat
aggggcaagctgccggagtcgcccaagagggctgaggagatctggcagcagagtgtcatc
ggagactatctggcccgcttcaagaatgaccgggtgaaagccttgaaagccatggagatg
acttggaacaacatggagaagaaggagaagctgatgtggattaagaaggcagcagaagac
caaaaacgatatgagagagagttaagtgagatgcgggcccctccagctgctacaaactct
tccaagaagatgaagttccagggagaacccaagaaacctcctatgaacggttaccagaag
ttctcccaggagctgctgtccaatggggagctaaatcacctgccgctgaaggagcgcatg
gtggagattggcagccgctggcagcgcatctcccagagccagaaggagcactataagaag
ctggcggaggagcaacagaggcagtacaaggtgcacttggacctctgggtcaagagcctg
tctccccaggaccgcgcagcatacaaagaatacatctccaataaacgtaagaacatgacc
aagctccgaggcccaaaccccaagtctagccggaccaccctgcagtccaagtcggagtcc
gaggaggatgacgatgaggaggaggaggacgacgaggaggaggaggaagaggaagatgat
gagaacggtgactcttctgaggatggcggggactcttctgagtccagcagtgaagatgaa
agcgaggatggggatgagaatgatgatgacgacgacgatgaagatgacgaagatgacgac
gatgaggatgaagacaacgagtctgagggcagtagctccagctcttcatcctcaggggac
tcttcggattctgactccaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (25)   
   UniProt (1)   
   RefSeq(pep) (24)   
DNA sequence (64)   
   RefSeq(nuc) (26)   
   GenBank (19)   
   EMBL (19)   
Protein domain (5)   
   Pfam (5)   
All databases (124)   

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