KEGG   Mus musculus (house mouse): 214616
Entry
214616            CDS       T01002                                 
Symbol
Afg2b, C130039A10Rik, Spata5l1
Name
(RefSeq) AFG2 AAA ATPase homolog B
  KO
K26051  ribosome biogenesis protein SPATA5L1 [EC:3.6.4.10]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mmu03009]
    214616 (Afg2b)
Enzymes [BR:mmu01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.10  non-chaperonin molecular chaperone ATPase
     214616 (Afg2b)
Ribosome biogenesis [BR:mmu03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    214616 (Afg2b)
SSDB
Motif
Pfam: AAA AAA_lid_3 AAA_5 AAA_16 RuvB_N AAA_22 AAA_14 AAA_33 Rad17 TIP49 AAA_18 bpMoxR AAA_28 TsaE AAA_3 nSTAND3 NTPase_1 Viral_helicase1 AAA_7 NACHT Zeta_toxin AAA_17 AAA_19 IstB_IS21 Vps4_C
Other DBs
NCBI-GeneID: 214616
NCBI-ProteinID: NP_001028428
MGI: 3036261
Ensembl: ENSMUSG00000118663
UniProt: A0A7N9VSG0 Q3TER3
Position
2:122461112..122474933
AA seq 747 aa
MAPDSGPFPDGQLLKLLPVDPRDRDTQRCRLGPAAFRSLGARLGSPLRISLPAGGCCLCT
AWPRRDRVDGFVQLDPQCASPGARVATGRIGMDCLQPVPCPPLRRLEVWPVLRPQAGAPS
SAAVLEVVHELLRNRPVSRGHVVTTPPGVPGPVAALHVMGGTPDPEPGGWVTPHTRITLS
DKPPPQVEPPGEVTLGGLSETADSLRELLRLPLRYPLALAALGLAVPRGVLLAGPPGVGK
TQLVRAVARETGAELLAVSAPALQGSRPGETEENVRRIFQRAQELASRGPSLLFLDEVDA
LCPRRGGPHRAPESRVVAQVLTLLDGIHRDREFVVVGATNRPDELDPALRRPGRFDREVV
IGTPTLKQREAILQVITSKMPISSHIDLGLLAEMTVGYVGADLTALCREAAMCALLKNEK
NQDSPKIEETDFLEAFKKIQPSSFRSSTGLMDIKPVGWEQIGGLEDVKLKLKQCVEWPLK
FPQEFARMGLTQPKGLLLYGPPGCAKTTLVRALATGCHCSFVSVCGADLFSPFVGDSEKV
LSQVFRQARANTPALVFLDEIDSVLGSRSVGTSGCDARERVLSVLLNELDGVGVRTVERR
GSKASQQECQEILSRSVMIVVATNRPDVLDDALLRPGRLDKIIYVPPPDQEGRLSILKVC
TNNMPVGPDVSLENLAAETCFFSGADLRNLCKEAALFALQENGLEATTVRQEHFTEALKT
VKPSLTLKELTFYENLFKKGLSNLEDD
NT seq 2244 nt   +upstreamnt  +downstreamnt
atggctccggactcggggcccttccccgacggacaacttttgaagctgctgccggtggat
ccccgggaccgggacacccagcgctgccgcctggggccggccgccttccgcagcttgggt
gcgcgcctgggctcgccgctgaggatctcgttgcccgccggcggctgctgcctctgcacg
gcctggccgcggcgcgacagggtggatggctttgtgcagctggacccgcagtgcgctagc
cccggggcccgggtggccacggggaggataggtatggactgcttgcaacccgtgccctgt
ccgcccctgcggcgcctagaggtgtggccggtgctgcggccccaggcgggagccccgagt
tccgccgcggtgctggaggtagtgcacgagctgctgcgcaaccggcctgtgtctcgggga
cacgtggtgaccaccccgccgggtgtccccggccctgtcgcagctctgcacgtgatgggc
gggacaccggacccagagcccggcgggtgggtcacaccgcatacccgcatcacgctcagt
gacaagcctccgccacaggtcgagcctcccggggaggtgacccttgggggtctgtcggag
accgccgactccctacgggagctgctccgcctgccgctgcgctacccgctcgccctagcc
gcgctggggctggctgtgccccgcggggtgctcctggcgggccccccgggagtgggcaag
acccagttagtgcgggccgtggcgcgcgagactggcgccgagctgctggcggtgagcgcc
ccggcgttgcagggctcccggcccggggagaccgaggagaacgtgcggcgcatcttccaa
cgagcccaggagctggccagccgcggacccagcctcctcttcctggacgaagtggatgcc
ctgtgtccccggagaggcggcccgcaccgagctcccgagagccgagtggtggcccaggtg
ttgacgctgctggacggcatccacagggacagggagtttgtggttgtgggagccaccaac
cggccagacgagttagacccagcgcttcgcaggccgggcaggtttgacagagaggttgtc
attggaactcccacccttaaacaaagagaagcaattctgcaagtgattacttcaaagatg
cccatctccagtcatattgatttaggtctcctggcagaaatgacggttggctatgttggt
gctgacctgacagcactctgtagggaggctgccatgtgtgcccttctcaagaatgagaag
aaccaagacagtcctaaaattgaggaaacagattttcttgaagcttttaaaaagattcag
ccctcatcatttcgaagttccactggactgatggacatcaagcctgttggctgggagcag
ataggtggccttgaagacgtaaagctgaagttaaagcagtgtgttgagtggcctctgaag
ttccctcaggagtttgctaggatgggtctgacacagccaaagggccttctcctgtatggt
ccccctggatgtgctaaaaccactctggtgagggccctggccacaggctgccactgctcc
ttcgtgtcagtgtgcggagctgatctcttctctccttttgttggagactcagaaaaagtc
ttgtctcaggtatttcgacaagcaagagccaatactccagcgcttgtgtttctggatgaa
attgactcagtcttggggtctcgctcagtcggcacctcgggatgtgacgctcgggagcga
gttctttcagttctgctgaacgaactcgatggtgtgggagttaggacggtagagagaaga
gggagtaaagcaagccaacaggagtgtcaagaaattcttagtcggagtgtcatgattgtc
gtggcaacaaataggcctgatgtgttagacgatgccttgctacggcctggaagattagat
aagatcatctacgtcccccctcctgatcaagagggcaggctttctattttaaaagtctgt
acaaacaacatgccagtagggcctgatgtttcactagaaaacctagcagcagaaacctgc
tttttctcaggagctgatcttagaaacctctgcaaagaagctgccttgtttgctctgcaa
gaaaacggactggaagcaaccacagtgagacaggagcacttcacagaagcactcaagact
gtgaagccatccttaactctgaaagagttgaccttctatgaaaacttatttaagaaagga
ctttctaacttggaagatgattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (14)   
   RefSeq(nuc) (2)   
   GenBank (6)   
   EMBL (6)   
Protein domain (25)   
   Pfam (25)   
All databases (72)   

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