KEGG   Mus musculus (house mouse): 214968
Entry
214968            CDS       T01002                                 
Symbol
Sema6d, 1110067B02Rik, D330011G23, mKIAA1479
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
  KO
K06842  semaphorin 6
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    214968 (Sema6d)
SSDB
Motif
Pfam: Sema PSI
Other DBs
NCBI-GeneID: 214968
NCBI-ProteinID: NP_954711
MGI: 2387661
Ensembl: ENSMUSG00000027200
UniProt: Q76KF0
Position
2:123931089..124509711
AA seq 1073 aa
MGFLLLWFCVLFLLVSRLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEIPQTEVIPSKKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLRTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDDTLAFIKSHPLMDSAVPPIADEPWFTKTRVRYR
LTAIEVDRSAGPYQNYTVIFVGSEAGVVLKVLAKTSPFSLNDSVLLEEIEAYNPAKCSAE
SEEDRKVVSLQLDKDHHALYVAFSSCVVRIPLSRCERYGSCKKSCIASRDPYCGWLSQGV
CERVTLGMLPGGYEQDTEYGNTAHLGDCHESLPPSTTPDYKIFGGPTSDMEVSSSSVTTV
ASSPEITSKVIDTWRPKLTSSRKFVVQDDPNTSDFTDTISGIPKGVRWEVQSGESNQMVH
MNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSCTDSSGSFAKLNGL
FDSPVKEYQQNIDSPKLYSNLLTSRKELPPNTDTKSMAVDHRGQPPELAALPTPESTPVL
HQKTLQAMKSHSEKAHSHGASRKEHPQFFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTS
FSNSNAHKAEKKLQSMDHPLTKSSSKREHRRSVDSRNTLNDLLKHLNDPNSNPKAILGEI
HMAHQTLMLDPVGPMAEVPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLER
QRGYHKNSSQRHSISAVPKNLNSPNGVLLSRQPSMNRGGYMPTPTGAKVDYIQGTPVSVH
LQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTTSVRPLNKYTY
NT seq 3222 nt   +upstreamnt  +downstreamnt
atggggttccttctgctttggttctgcgtgctgttccttctggtctccaggttacgggcg
gtcagcttcccagaagacgatgagcccctcaacacggttgactatcactattcaaggcaa
tatccggtttttagaggacgcccttcaggcaacgaatcgcagcacaggctggactttcag
ctgatgttgaaaattcgagacacactttatattgctggcagggatcaagtctatacagtg
aacttaaatgaaatcccccaaacagaggtgataccaagcaagaagctgacgtggaggtcc
agacagcaggatcgagaaaattgtgctatgaaaggcaagcataaagatgaatgccacaac
ttcatcaaagtctttgtcccaagaaatgatgagatggtttttgtctgtggtaccaatgct
ttcaacccgatgtgcagatactataggttgagaacgttagagtatgatggggaagaaatt
agtggcctggcacgatgcccgtttgatgcccgacaaaccaatgtcgccctctttgctgat
ggaaaactctattctgccacagtggctgatttcctggccagtgatgctgtcatttacaga
agcatgggagatggatctgcccttcgcacaataaaatacgattccaagtggatcaaagaa
ccacacttccttcatgccatagaatatggaaactatgtctatttcttcttcagagaaatc
gccgtggaacataataacttaggcaaggctgtgtattcccgcgtggctcgcatttgtaaa
aacgacatgggtggctcacagcgggtcctggagaaacactggacttccttccttaaggct
cggctgaactgctccgttcctggagattcctttttctacttcgacgtcctgcagtctata
acagacataatccaaatcaatggcatccccactgtggttggggtcttcaccacacagctc
aacagcattcctggttctgcagtctgtgcctttagcatggacgacattgagaaagtgttc
aaagggcggttcaaagagcagaaaaccccagactctgtttggacagcagttcccgaagac
aaagtaccaaaaccaaggcctggctgttgtgccaaacacggcctcgcagaagcttacaag
acctccatcgactttccagatgacaccctggctttcatcaagtcccacccgctgatggac
tctgccgtcccacccattgccgatgagccctggttcacaaagacacgggtcaggtacagg
ttgacagccatcgaagtggaccgttcagcagggccataccaaaactacacagtcatcttt
gttggctctgaagctggcgtggtacttaaagttttggcaaagaccagtcctttctctctg
aatgacagtgtattactcgaagagattgaagcttataacccagccaagtgcagcgccgag
agtgaggaggacagaaaggtggtctcattacagctggacaaggatcaccatgctttatac
gtggccttctctagctgcgtggtccgcatccccctcagccgctgtgagcgctacggatcg
tgtaaaaagtcttgcattgcatcacgtgacccgtactgtggttggttaagccagggagtt
tgtgagagagtgaccctagggatgctccctggaggatatgagcaggacacggagtacggc
aacacagcccacctaggggactgccacgaaagtttgcctccttcaactacaccagattac
aaaatatttggcggtccaacatctgacatggaggtatcctcatcttctgttaccactgtg
gcaagtagcccagaaattacatctaaagtgattgatacctggagacctaaactgacgagc
tcccggaaatttgtagttcaagatgacccaaatacttctgattttactgatactatatca
ggtatcccaaagggtgtacggtgggaagtccagtctggagaatccaatcagatggtccac
atgaatgtcctcatcacctgcgtgtttgccgcttttgtcttgggcgcgttcatcgcagga
gtggccgtgtactgctaccgtgacatgttcgttcggaagaacagaaagatccataaagac
gcagaatccgcccagtcgtgcacagactccagcggaagcttcgccaagctgaacggcctc
tttgacagccccgtcaaggaataccagcagaacattgattctcccaaactctacagcaac
ctgctgaccagtcggaaggaactgccaccaaacacggatacaaagtccatggccgtggac
cacagaggccagcctcccgagctggctgctctccccacgccggaatccacacctgtcctc
caccagaagaccctgcaggccatgaagagccactctgagaaggcccacagccacggtgct
tcaaggaaagaacacccccagttttttccttctagtcctccaccccattccccattgagt
cacgggcatatccccagtgccatcgttcttccaaacgccactcacgactacaatacatcc
ttctccaactcgaatgcccacaaagccgaaaagaagcttcagagcatggatcaccctctt
acgaagtcatccagtaagcgggagcaccggcggtctgtggattccaggaatactctcaat
gatctcctgaagcatctaaatgacccaaacagtaaccccaaagccatcctgggagagatc
catatggctcatcaaaccctcatgctggacccggtgggaccaatggctgaggtcccaccc
aaggtccctaaccgggaggcatctctatactcccctccctccacactccccagaaatagt
ccaaccaagagagtagatgtccccaccactcctggggtgccaatgacttctctggaaaga
caaaggggttatcacaaaaattcctcccagaggcactctatatctgccgtgcctaaaaac
ttaaactcaccaaatggtgttttgttatctagacagccgagtatgaaccgtggaggctat
atgcccaccccaacaggggcgaaggtggactatattcaggggacaccggtgagtgttcat
ctgcagccctccctctccagacagagcagctataccagtaatggcaccctccccaggacg
ggactaaagaggacaccatccttaaaacctgatgtgccaccaaagccttcctttgttccg
caaaccacatctgtcagaccactgaacaagtacacgtactag

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (50)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (48)   
DNA sequence (74)   
   RefSeq(nuc) (48)   
   GenBank (13)   
   EMBL (13)   
Protein domain (2)   
   Pfam (2)   
All databases (154)   

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