KEGG   Mus musculus (house mouse): 216848
Entry
216848            CDS       T01002                                 
Symbol
Chd3, 2600010P09Rik, Chd7, Prp7, Prp9-1
Name
(RefSeq) chromodomain helicase DNA binding protein 3
  KO
K11642  chromodomain-helicase-DNA-binding protein 3 [EC:5.6.2.-]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    216848 (Chd3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    216848 (Chd3)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    216848 (Chd3)
  Chromatin remodeling factors
   NuRD complex
    216848 (Chd3)
SSDB
Motif
Pfam: SNF2-rel_dom CHDCT2 CHDII_SANT-like Helicase_C CHDNT DUF1087 PHD Chromo HDA2-3 ResIII DEAD HMG_box PHD_2 AAA_22 LPD11 DIX
Other DBs
NCBI-GeneID: 216848
NCBI-ProteinID: NP_666131
MGI: 1344395
Ensembl: ENSMUSG00000018474
UniProt: B1AR17 Q8BR71 Q8K0T3
Position
11:complement(69234099..69260325)
AA seq 2055 aa
MASPLRDEEEEEEEMVVSEEEEEEEEEGDEEEEEVEAADEDDEEEDEEGVLGRGPGHDRS
RDRHSPPSCHLFPPPPPPLPPPPPPDKDDIRLLPSALGVKKRKRGPKKQKENKPGKPRKR
KKLDSEEEFGSERDEYREKSESGGSEYGTGPGRKRRRKHREKKEKKTKRRKRGEGDGGHK
QVEQKSSATLLLTWGLEDVEHVFSEEDYHTLTNYKAFSQFMRPLIAKKNPKIPMSKMMTI
LGAKWREFSANNPFKGSAAAVAAAAAAAAAAVAEQVSAAVSSATPIAPSGPPPALPPPPA
PEIQPPPIRRAKTKEGKGPGHKRRNKSPRVPDGRKKLRGKKMAPLKIKLGLLGGKRKKAG
SCAFQSEEGHEPEAEESDLDSGSVHSASGWPDGPVRAKKLKRGRPGRKKKKVLGCPAVTG
EEEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEG
VQWEAKEEEEEYEEEGEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLP
DIPNGEWLCPRCTCPVLKGRVQKILHWRWGEPPVAVPAPQQADGNPDVPPPRPLQGRSER
EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK
VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSMDKKGNYHYLVKWKDLPYDQSTWEEDEM
NIPEYDDHKQSYWRHRELIMGEDPAQPRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRF
ITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPF
LVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMK
REAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKL
LLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRL
KADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKC
CNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKM
LDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATA
DTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLV
VRPGLGSKAGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQ
DATEDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYWEKLLRHHYEQ
QQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQL
RNEKDKPLPPLLARVGGNIEVLGFNTRQRKAFLNAVMRWGMPPQDAFTTQWLVRDLRGKT
EKEFKAYVSLFMRHLCEPGADGSETFADGVPREGLSRQQVLTRIGVMSLVKKKVQEFEHI
NGRWSMPELMPDPSAESKRSSRASSPTKTSPTTPEASTTNSPCTSKPATPAPSEKGDGVR
TPLDKDDTENQEEKPEKNSKVGEKMEAEVDSPSPAPSLGERLEHRKILLEDEAPGVPGET
EPEPGYRGDREKSASEPTPGERGEEKPLDVQEHRERTEGETGDLGKREDVKADRELRLGP
PRDEPRPNGRREEKVEKPRFMFNIADGGFTELHTLWQNEERAAISSGKLNEIWHRRHDYW
LLAGIVLHGYARWQDIQNDAQFAIINEPFKTEANKGNFLEMKNKFLARRFKLLEQALVIE
EQLRRAAYLNLSQEPAHPAMALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQ
LEELLSDMKADVTRLPATLSRIPPIAARLQMSERSILSRLASKGTEPHPTPAFPPGPYAT
PPGYGAAFSAAPVGALAAAGANYSQMPAGSFITATTNGPPVLVKKEKEMVGALVSDGLGL
DRKEPRAGEVICIDD
NT seq 6168 nt   +upstreamnt  +downstreamnt
atggcttcccctctgagggacgaggaggaggaggaggaggagatggtggtgtcggaggag
gaagaagaggaggaagaagagggcgacgaggaggaggaggaggtggaggcggccgacgag
gacgatgaggaggaggacgaagagggagtactcgggcgcgggccgggccacgaccggagc
cgcgaccgccacagcccccccagctgccacctcttcccgccgccgccgccgccgctgccg
ccgcccccgccaccagataaagatgatattcggctgctgccttcagcgttgggtgtgaag
aagcgaaaacgaggccctaagaagcagaaggaaaacaagccaggcaaacctaggaaacgg
aagaagctcgacagtgaagaggaatttggctcagagcgagatgagtaccgggagaagtca
gagagtggaggcagcgagtatggaactggaccaggtcggaaacgaagaaggaagcaccga
gaaaaaaaagagaaaaaaacaaaaaggaggaaaaggggagaaggggatgggggacacaag
caggtggagcagaagtcatccgcaaccttgcttctgacctggggcttagaggatgtggaa
cacgtgttctccgaggaggactaccacacacttaccaattacaaagctttcagtcagttc
atgaggcccctaattgctaagaagaatcctaagatcccgatgtcaaagatgatgaccatc
ctgggggccaagtggagagagttcagtgccaataaccccttcaaagggtcggcagctgcc
gtggcggcggcagcggcagcagcagcagcagctgtggctgagcaggtgtcagctgctgtc
tcctcagccacccccatagcaccatctggacccccccctgcccttccaccaccccctgct
cctgaaatccagcccccacccatcagaagagccaaaaccaaagagggcaaaggtccaggc
cacaagaggcggaataagagcccccgagtgcctgatggacgcaagaagcttcgagggaag
aagatggcgccactgaaaatcaagctagggctgctgggtggcaagaggaagaaggcgggc
tcgtgtgcttttcagagtgaggagggccatgaaccagaggcagaggagtcagacctggac
agtggtagtgtccatagtgcctcaggctggcctgatggccctgtccgtgccaagaagctg
aagcgaggtcggccaggaaggaagaagaagaaggtcctgggctgtcctgcagtgaccgga
gaggaggaagttgacggctacgagacggatcaccaggattactgtgaggtgtgccagcag
ggcggggaaattattctgtgcgacacctgcccccgtgcctaccacctcgtctgccttgac
cccgagcttgaccgggctcctgagggcaagtggagctgcccccactgtgagaaggagggg
gtgcagtgggaggccaaggaggaggaggaagagtatgaggaggaaggggaggagggagag
aaggaggaagaggatgaccacatggagtactgccgagtgtgcaaggacggcggggagctc
ctgtgctgtgacgcttgcatctcctcctaccacatccattgtctgaaccccccactgcct
gacattcccaatggcgaatggctgtgcccacgatgcacatgtcctgtgctgaagggccgt
gttcagaagatcttgcattggcgatggggggagccacctgtggcagtgccagcaccgcag
caggcagacgggaacccagacgtcccaccccctcgtcctcttcaaggcagatcagagcga
gagttctttgtcaagtgggtgggactgtcctactggcactgttcctgggccaaggagctt
cagctggaaatcttccacttggtaatgtaccgaaactatcaacggaaaaatgacatggac
gagcccccgccgctggactatggctctggtgaggatgatgggaagagtgacaagcgcaag
gtgaaggacccgcactatgcggagatggaggagaagtactaccgtttcggcatcaagccg
gagtggatgactgtccaccgcatcattaaccatagtatggataaaaaggggaactaccac
taccttgtgaaatggaaggatctgccttacgaccagtccacgtgggaggaggatgagatg
aacatcccagagtacgacgaccataagcagagctactggagacaccgtgagctaattatg
ggcgaggaccccgcacagcctcgaaagtataagaagaagaagaaggagttacagggtgat
gggcctcccagttcacctactaacgatccaacagtgaaatatgagactcagccaaggttc
atcacagccacgggcggcacactgcacatgtatcagctggaagggctgaactggctgcgc
ttctcgtgggcccaaggcactgacacgatcctggcggatgagatggggctgggcaagacc
atccaaaccatcgtctttctctactcactgtataaggagggccacacaaaaggtcccttc
ctggtgagtgctccactctccaccatcatcaactgggaacgggagttccagatgtgggca
cccaagttctatgtggtcacatatacgggcgacaaggacagccgggccatcataagagaa
aacgagttttcgtttgaggataatgccataaaaggcgggaagaaagctttcaagatgaag
agagaggcacaggtgaagttccatgtccttctgacatcatacgagctgatcaccatcgat
caggcggcgcttggctccatccgctgggcctgtcttgtggtggatgaggctcatcgactc
aagaacaaccagtccaagtttttcagggtcctcaatggctacaagatagatcataagttg
ttgctgacggggaccccgctgcagaacaacctggaggagctcttccaccttctcaacttc
ctcaccccagagaggttcaacaacttggagggcttcttggaggagtttgccgacatatcc
aaagaggaccagattaagaaactgcatgatttactggggccacatatgcttcggagactc
aaggcggatgtctttaagaacatgccagccaagaccgagctcattgttcgagtggagcta
agccccatgcagaagaaatactacaagtacatcctaactcgaaattttgaggccttgaat
tctcgaggtggtgggaaccaagtgtccctgcttaacatcatgatggaccttaagaagtgc
tgcaaccacccgtacctcttccccgtggctgctatggagtctcctaaactccccagtggg
gcttatgagggtggggcgcttattaagtcatcagggaagctgctgctgctgcagaagatg
ctgcgcaagctgaaggagcaaggacacagagtgctcatcttctcccagatgaccaaaatg
ttagaccttctggaggacttcctagactatgaaggctataagtatgagcgcatcgatggt
ggtatcacgggcgccctcaggcaggaggccattgatcgcttcaatgcccctggtgcccaa
cagttctgcttcctcctgtccacccgagctggtggcctgggcatcaacttggccactgct
gacactgtcatcatcttcgattctgactggaacccccataatgacatccaggccttcagc
agagcccatcggattggccaggccaacaaagtgatgatttaccggtttgtgacccgagcc
tctgtggaagaacgaatcacacaggtggctaagagaaagatgatgctgacacacctagtg
gtgcggccaggcctgggctccaaggctggctccatgtccaagcaggagctggacgacatc
ctcaaatttggcaccgaggagctattcaaagatgaaaatgagggagagaataaggaggag
gatagcagtgtgatccactatgacaatgaagccatcgctcgactgctggaccgtaaccag
gatgcgactgaggacacggatgtgcagaacatgaacgaatacctcagctccttcaaggtg
gcacagtatgtcgtgcgtgaagaagacaagattgaggagatcgagcgagagatcatcaag
caggaggagaatgtggatcctgactactgggagaagctactgagacatcactatgagcag
cagcaagaagacctggcccgcaacctaggcaagggcaagcgggttagaaagcaggttaac
tacaacgatgccgcccaggaggatcaagacaaccagtcagagtactcagtggggtccgag
gaagaggatgaagactttgatgagcgtcctgaaggccgtcgacagtcaaagaggcagctt
cgaaatgagaaggacaagccactgcctccattgctggctcgggttgggggcaacattgaa
gtactgggattcaatactcgacaacggaaggccttccttaacgctgtgatgcgctggggg
atgccaccccaggacgcgttcaccacacagtggctagtgagagacctgaggggcaaaacg
gagaaggagtttaaggcctatgtgtctttgttcatgcgccatctgtgtgagcctggggca
gatggctccgaaacgtttgcggatggggtccctcgggaggggctgagtcgccagcaggtg
ttgacccgcattggagtcatgtctctcgtcaagaagaaggtccaagagtttgagcatatc
aatggacgctggtcaatgccagagctgatgcctgaccccagtgctgagtccaagcgctct
tccagagcctcctctccaaccaaaacatctcccaccactcctgaggcttctacaaccaac
agtccttgtacctctaagcctgctactccagctccaagtgagaagggagatggtgtgagg
acaccgctggacaaggatgacactgagaaccaggaagagaagccagagaagaacagcaaa
gtgggggaaaagatggaggcagaggtcgattctcccagcccagccccatcactgggagaa
cggctagaacacaggaaaattctcttagaggatgaagcaccaggggtacctggagagaca
gagcctgaacctggatacagaggagacagggagaagtctgcctcagagccaacaccagga
gaaaggggggaggagaagccattggatgtacaggaacacagggagaggacggagggggaa
acaggggatttgggcaagagagaagatgtaaaagccgatcgggagcttcgacttgggcct
cctcgagatgagccacggcccaatgggcgccgtgaggagaaggtggagaagccgagattc
atgttcaacattgccgatggtggtttcacagagctgcacacattgtggcagaatgaggaa
cgagcagctatttcctcggggaaactcaatgagatctggcaccggaggcatgactactgg
cttctggctggcattgtcctccatggctatgcccggtggcaagacatccagaatgacgct
cagtttgccattatcaatgaaccatttaaaacggaagccaataaggggaacttcctggag
atgaaaaataaattcctggcccggaggttcaagctcctggagcaggcgctggtgatcgag
gagcagctgcggcgggcggcctacctgaacctgtcacaggagccggcgcaccccgccatg
gccctccacgcccgctttgccgaggccgagtgcctagccgagagccaccagcacctctcc
aaggagtcgctggcagggaacaagccagccaacgctgtcctgcacaaggttctgaaccag
ctggaggaattgctgagcgacatgaaggcagatgtgacccgcctgccagccacgctgtcc
cgaataccccccatcgcagcccgccttcagatgtccgagcgcagcatcctcagccggctg
gccagcaagggcacggagcctcaccccacaccggcctttcccccgggtccttacgccaca
cctccggggtacggggcagccttcagcgccgcacccgtaggggccctggccgccgcaggc
gccaattacagccagatgcctgcagggtccttcatcacagccaccaccaacggccctcca
gtgctggtgaagaaagagaaggaaatggtgggggcgttggtatcagacgggctggggctg
gatcggaaggagccccgagcaggggaggtgatttgtatagacgactga

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