KEGG   Mus musculus (house mouse): 217827
Entry
217827            CDS       T01002                                 
Symbol
Nrde2, 6720454P05Rik
Name
(RefSeq) nrde-2 necessary for RNA interference, domain containing
  KO
K26109  nuclear exosome regulator NRDE2
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    217827 (Nrde2)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     217827 (Nrde2)
SSDB
Motif
Pfam: NRDE-2 TPR_14 TAF4 TPR_12
Other DBs
NCBI-GeneID: 217827
NCBI-ProteinID: NP_001277232
MGI: 2670969
Ensembl: ENSMUSG00000021179
UniProt: Q80XC6
Position
12:complement(100091709..100126981)
AA seq 1172 aa
MALFPAFADVSEASGDGAFRKELDWLSNPSFRVGNLTSLSRQTEEVTALASEGSPPPRYS
FIRSPLKSELSGESNTSEKLAQTSRKKKKEKKKRRKHQHHRKTKRRHEQLSSSGSESDTE
AGKDRASRSIRDDQKEAEKPCQGSNAAAAVAAAAGHRSIWLEDIHDLTDVFRTDKKPDPA
NWEYKSLYRGDIARYKRKGDSCLGINPKKQCISWEGASAAKKHSHRHLERYFTKKNVGLM
RTEGIAVCSNPEPASSEPVTFIPVKDSAEAATPVTSWLNPLGIYDQSTTQWLQGQGPAEQ
ESKQPDSQQDRENAALKARVEEFNRRVRENPWDTQLWMAFVAFQDEVMRSPGIYALGEGE
QEKHRKSLKLLLEKKLAVLERAIESNPGSVELKLAKLQLCSEFWEPSALAKEWQKLLFLH
PNNTSLWQRYLSFCQSQFGTFSVSKLHSLYGKCLSTLSAVKDGSMLSHPVLPGTEEAMFG
LFLQQCHFLRQAGHSEKVISLFQAMVDFTFFKPDSVKELPTKVQVEFFEPFWDSGEPRVG
EKGARGWRAWMHQQERGGWVLITPDEDDEEPEEEDQEIKDKTLPRWQIWLAVERSRDQRH
WRPWRPDKTKKQTEEDCEDPERQVLFDDIGQSLIRLSSPDLQFQLIQAFLQFLGVPSGFL
PPASCLYLAMDESSIFESELYDEKPLTYFNPSFSGISCVGSMEQLGRPRWTKGHNREGEE
FVRNVFHLVLPLLAGKQKSQLSLSWLRYEIAKVIWCLHTKKKRLKSQGKSCKKLAKNLLK
EPENRNNFCLWKQYAHLEWLLGNTEDARKVFDTALSMAGSSELKDRELCELSLLYAELEM
ELSPDSRGATTGRAVHILTRLTESSPYGPYTGQVSSTQVLKARKAYELALQDCLGQSCAS
SPAPAEALDCLGSLVRCFMLFQYLTVGIDAAVQIYGRVFAKLKGSARLEDPGPEDSTSSQ
SLTNVLEAVSMMHTSLLRFHMNVCVYPLAPLRETLSDALKLYPGNQVLWRAYVQIQNKSH
SANKTRRFFDTVTRSAKHLEPWLFAIEAEKLRKKLVESVQRVGGREVHATIPETGLTHRI
RALFENAIRSDKGNQCPLLWRMYLNFLVSLGNKERSKGVFYKALQSCPWAKVLYMDAMEY
FPDELQEILDVMTEKELRVRLPLEELELLLED
NT seq 3519 nt   +upstreamnt  +downstreamnt
atggcgctgttcccggcttttgcggacgtaagtgaggcctccggtgatggggcattcagg
aaagagttagattggctgagcaacccaagctttcgtgttggaaatctaacttctctgagc
cgacaaactgaagaggtcacagcccttgcttctgaagggtcaccaccgccaaggtactct
tttatcaggagtcctctgaagtcagagctctcaggtgagagcaacactagcgagaagctc
gcacagacaagcaggaagaagaagaaggagaaaaagaagagacggaagcatcagcaccac
aggaaaaccaagaggaggcacgagcagttgagcagcagcggctctgagtcagacacagag
gctgggaaggacagggcttcccggagcatcagggacgaccagaaggaagccgagaaaccc
tgtcagggaagcaatgcggctgctgctgttgctgctgctgctggacatcggtccatttgg
ctggaagatattcacgatctgaccgacgtcttcaggactgataagaagccagatcctgcc
aactgggagtataaatctctgtatcgtggggatatagcaaggtacaagaggaagggagac
tcctgcctgggtatcaatcctaagaaacagtgtatatcttgggaaggggcttctgcagca
aagaagcactcacacaggcacctggagcgctattttaccaagaagaatgtggggttaatg
agaacagagggcattgctgtgtgcagtaaccccgagcctgcctcctccgagcccgtcaca
ttcatcccagtgaaggactctgctgaggcagctactcctgttacatcatggctgaatcct
ctggggatttatgatcagtctaccacacagtggttacaaggacagggtccagcagagcaa
gagtcaaagcagccggactcgcaacaggacagggagaatgctgctctcaaggccagagtg
gaagagtttaacagaagggttcgggagaatccttgggacacgcaactatggatggcgttt
gtggctttccaggacgaggtcatgaggagtcctggcatctatgcccttggggaaggagaa
caggagaagcacaggaagtccctgaagctcctcctggagaagaagctggctgtgctggag
cgggccatcgagagcaacccaggcagcgtggagctgaagcttgccaagctgcagctgtgc
tcagagttctgggagcccagtgcgctggccaaggagtggcagaagctcctcttcctgcac
cccaacaacacaagcctgtggcagcgctatctctccttttgccagagccagtttggtacc
ttttctgtgtccaaactccacagtctgtatggcaagtgcttgagtaccttgtctgctgtt
aaagatggcagcatgctatcccaccctgtgttgccgggcaccgaggaggccatgtttggg
ctctttcttcagcagtgccactttctacggcaggctggccactcagagaaggtcatctct
ttgttccaggccatggttgacttcaccttcttcaagcctgacagtgtgaaagagctgcct
actaaagtacaggtggaattctttgagcccttctgggacagcggagaaccacgcgttggg
gagaagggagcccgaggctggcgggcgtggatgcaccaacaggagcgaggtggctgggtg
ctcatcaccccagatgaggatgacgaggagcccgaagaggaggaccaggagataaaagac
aagaccctgccccggtggcagatctggcttgctgttgagcgttctcgagaccagaggcac
tggcgtccctggcgccctgataagaccaagaagcaaacggaggaagactgtgaggaccct
gagagacaggtgctgtttgatgacattgggcaatctttgatcagactttccagcccagac
cttcagttccagctcatccaggcctttctgcagttcctgggcgtgccttccggcttcctg
cccccagcctcctgcctttacctggccatggacgagagcagcatctttgagagtgaactt
tatgatgaaaagcccctgacttacttcaacccttccttttcgggcattagctgtgtcggc
tccatggaacagttgggtcgccctcgctggaccaaaggtcacaaccgagagggcgaggag
tttgtccgcaatgtcttccacctggtgctgcctttgctcgcaggcaagcagaagtcccag
ctcagcctctcctggttacggtacgagattgcaaaggtcatttggtgtctacacactaaa
aagaagcgattgaagtctcagggaaagagctgcaaaaaactagccaagaatctcctcaag
gagccagaaaaccgcaacaacttctgcctctggaagcagtatgcacacctggagtggttg
ctcggtaacacagaggatgccagaaaagtgttcgacacagcactcagcatggcaggcagc
agcgagctgaaggaccgtgaactctgcgagctcagtctgctctatgccgagctggagatg
gaactgtcgccggactcgagaggagccaccacaggccgagcggtccacatattaacacgg
ctgacggagagcagtccctacgggccctacacggggcaggtctcgtccacccaggtgctg
aaagctcggaaggcttacgagctcgcgctgcaggactgcctgggccagagctgtgcctcc
agcccagctcctgcagaggccttggactgcctgggtagcttggtccgatgctttatgctc
ttccagtatttgactgtgggcattgatgctgctgtgcagatatacggaagggtgtttgcc
aagctgaagggctctgctcgcttagaagacccagggccagaggacagcaccagctcccag
agtttgaccaatgtgctcgaggctgtcagcatgatgcacacaagcctgctgcgattccac
atgaacgtttgtgtttaccctctggctccactccgagagaccctctccgatgctttaaag
ctgtatccgggcaaccaggttctttggagggcttatgtacagattcagaataagtcccac
agtgctaacaagaccagaaggttctttgacacagttactaggtctgccaaacatttggag
ccttggctatttgcaatcgaagctgagaagctgaggaaaaagctagtggaatctgttcag
agggtaggaggcagagaggtccatgcaacaatccccgagactggccttacgcatcgcatc
agagctttgtttgaaaatgcgattcggagcgacaagggcaaccagtgtcccctactgtgg
aggatgtatttgaattttttggtttccttaggaaacaaagaaagaagcaaaggcgtgttc
tacaaggccctccagagctgtccttgggcaaaggtgctatacatggacgccatggagtat
ttcccagacgagctgcaggagatcctggacgtgatgaccgagaaggagctccgtgtgcgc
ctgccccttgaggagctggagctgctgctggaggattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (39)   
   RefSeq(nuc) (7)   
   GenBank (16)   
   EMBL (16)   
Protein domain (4)   
   Pfam (4)   
All databases (80)   

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