KEGG   Mus musculus (house mouse): 218214
Entry
218214            CDS       T01002                                 
Symbol
Kdm1b, 4632428N09Rik, Aof1
Name
(RefSeq) lysine (K)-specific demethylase 1B
  KO
K19413  lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    218214 (Kdm1b)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    218214 (Kdm1b)
SSDB
Motif
Pfam: Amino_oxidase NAD_binding_8 zf-CW Pyr_redox Pyr_redox_2 SWIRM Thi4 DAO HI0933_like FAD_binding_3 Pyr_redox_3 FAD_oxidored FAD_binding_2 Lycopene_cycl NAD_binding_9 GIDA 2-Hacid_dh_C AlaDh_PNT_C NAD_binding_7 Attractin YjeF_N Shikimate_DH zf-RING_2
Other DBs
NCBI-GeneID: 218214
NCBI-ProteinID: NP_758466
MGI: 2145261
Ensembl: ENSMUSG00000038080
UniProt: Q8CIG3
Position
13:47196849..47238085
AA seq 826 aa
MAASRGRSKKRSNLELSPDNLPLRSSGRQAKKKAVEIPDEDEDGSSEKKYRKCEKAGCTA
AYPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYSAWKRVWTSN
GKTEPSPKAFMADQQLPYWVQCTKPECGKWRQLTKEIQLTPHMARTYRCGMKPNTITKPD
TPDHCSFPEDLRVLEVSNHWWYPMLIQPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTHRA
TVTAATTTTGSASPGEMEPSKAAPSSLVLGMNRYFQPFYQPNECGKALCVRPDVMELDEL
YEFPEYSRDPTMYLALRNLILALWYTNCKEALTPQKCIPHIIVRGLVRIRCVQEVERILY
FMTRKGLINTGVLTVAAGQHLLPKHYHNKSVLVVGAGPAGLAAARQLHNFGMKVTVLEAK
DRIGGRVWDDKSFKGVVVGRGPQIVNGCINNPVALMCEQLGISMRKLGERCDLIQEGGRI
TDPTVDKRMDFHFNALLDVVSEWRKDKTLLQDVPLGEKIEEIYRAFVKESGIQFSELEGQ
VLQFHLSNLEYACGSSLHQVSARSWDHNEFFAQFAGDHTLLTPGYSTIIEKLAEGLDIRL
KSPVQSIDYTGDEVQVTTTDGMGHSAQKVLVTVPLAILQRGAIQFNPPLSEKKMKAINSL
GAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASQRGLFAVFYDMDSQQSVLMSVITGE
AVASLRTMDDKQVLQQCMGILRELFKEQEIPEPTKYFVTRWSTEPWIQMAYSFVKTFGSG
EAYDIIAEEIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq 2481 nt   +upstreamnt  +downstreamnt
atggccgcatctcgagggaggtcaaagaagagaagcaatttggagctttctcctgataac
ctgcctttgaggagctctgggcggcaggcaaagaagaaagcagtagagatcccggatgag
gatgaagatggttcgtcggagaagaagtaccggaaatgtgaaaaggcaggctgtacggcg
gcgtaccctgtgtgctttgcaagcgcttctgaaagatgtgccaaaaatggttacacctcc
cgatggtatcacctttcctgtggggaacacttctgcaatgaatgctttgaccactactac
agaagccacaaagatgggtatgacaaatacagtgcatggaaaagagtgtggaccagcaac
ggcaagacggagccaagccccaaggcgttcatggcagaccagcagctgccctactgggtg
cagtgcacaaaacccgagtgtggaaagtggaggcagctgaccaaggagatccagcttact
ccacacatggcgaggacttaccgctgtggcatgaagccaaatactattaccaagcctgac
acccccgatcattgttctttccccgaggatctgagagtgctggaagtttccaaccactgg
tggtaccccatgctcatccagcctccgttgctgaaggacagtgtggcagcaccgctgctt
tctgcctactaccccgactgcgttggcatgagcccctcctgcaccagcacacatcgtgcc
accgtcacagctgctaccacaaccaccggcagtgccagcccgggggagatggagccctcc
aaggcagccccctcttcacttgtcctaggcatgaaccggtacttccagccgttctaccag
cccaacgagtgtgggaaagcgctgtgcgtgaggccagacgtgatggagctggatgagctc
tacgagttcccagagtattcgcgggaccccaccatgtacctggctttgagaaacctcatc
ctcgcactgtggtacacaaactgcaaagaagctctcacccctcagaagtgcattccccac
atcattgtccggggccttgtccgcatcagatgcgttcaggaagtggagaggattctttac
ttcatgacgaggaaaggcctcatcaacacaggcgttctcacggtggcagccggccagcat
cttcttcctaaacactaccacaataaatctgttctggttgttggggctggtccagcaggc
ttagcagctgctaggcaactgcataactttgggatgaaggtgactgtcctggaagccaaa
gaccggattggaggccgagtatgggatgacaagtcctttaaaggcgtggtagtaggaaga
ggaccccagattgtcaatggctgtattaataacccagtagcactaatgtgtgagcaactt
ggcatcagcatgcgtaagttgggagagagatgtgacttaattcaggaaggtggacggata
actgaccccactgttgacaaacgcatggactttcattttaatgctctcttggatgttgtc
tctgagtggaggaaggataagactctgctccaagatgtccctttaggagagaagatagag
gagatctaccgagcttttgtgaaggagtctggcatccagttcagcgagctggagggacag
gtgctgcagttccacctgagtaacctggagtatgcttgtggcagcagcctgcaccaggtg
tctgctcgctcctgggatcacaatgaattctttgcccagtttgctggtgaccataccctc
ctcacaccaggctactccactatcattgagaaactggctgaaggactagacattcgactc
aaatctccagtgcaaagtatagattatactggagatgaagtgcaggttaccacgacagat
ggtatggggcattctgcacaaaaggtgttagtcactgtgccattggccatactacagaga
ggtgccatccagtttaatccaccattgtcagaaaagaagatgaaagccatcaacagcttg
ggtgcaggcatcattgaaaagattgccttgcagtttccatatagattttgggacagtaaa
gttcaaggagctgacttttttggccatgttcctcccagtgccagccaacgaggcctcttc
gctgtattctatgacatggactctcagcagagtgtgctgatgtcggtgatcacaggggag
gcagtggcgtccctcaggaccatggatgacaagcaggtgctgcagcagtgcatgggcatc
cttcgggagctgttcaaggagcaggagatcccagaacccacaaagtattttgtcacacgg
tggagcacagagccatggatccagatggcatatagtttcgtgaagacctttggaagtggc
gaggcctatgatattattgctgaagaaatacaaggaactgtcttttttgctggtgaggca
acaaacaggcatttcccacaaactgttactggggcatatttaagtggtgtacgagaagca
agcaagattgcagccttttaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (10)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (30)   
   RefSeq(nuc) (10)   
   GenBank (10)   
   EMBL (10)   
Protein domain (23)   
   Pfam (23)   
All databases (87)   

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