KEGG   Mus musculus (house mouse): 22187
Entry
22187             CDS       T01002                                 
Symbol
Ubb, Rps27a, Uba52, Ubb2, Ubc
Name
(RefSeq) ubiquitin B
  KO
K04551  ubiquitin B
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04120  Ubiquitin mediated proteolysis
mmu04137  Mitophagy - animal
mmu04140  Autophagy - animal
mmu05012  Parkinson disease
mmu05022  Pathways of neurodegeneration - multiple diseases
mmu05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    22187 (Ubb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    22187 (Ubb)
   04137 Mitophagy - animal
    22187 (Ubb)
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    22187 (Ubb)
  09164 Neurodegenerative disease
   05012 Parkinson disease
    22187 (Ubb)
   05022 Pathways of neurodegeneration - multiple diseases
    22187 (Ubb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mmu04121]
    22187 (Ubb)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmu04147]
    22187 (Ubb)
Ubiquitin system [BR:mmu04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   22187 (Ubb)
Exosome [BR:mmu04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   22187 (Ubb)
  Exosomal proteins of other body fluids (saliva and urine)
   22187 (Ubb)
  Exosomal proteins of colorectal cancer cells
   22187 (Ubb)
  Exosomal proteins of bladder cancer cells
   22187 (Ubb)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 Dsc3_N OTU1_UBXL
Other DBs
NCBI-GeneID: 22187
NCBI-ProteinID: NP_001300913
MGI: 98888
Ensembl: ENSMUSG00000019505
UniProt: P0CG49 Q78XY9
Position
11:62442329..62444037
AA seq 305 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGY
NT seq 918 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt
gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag
cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac
atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc
gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag
aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatc
tttgccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaagag
tcaaccctgcacctggtcctccgtctgaggggtggcatgcagatcttcgtgaagaccctg
actggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggcc
aagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggcaag
cagctggaagatggccgcaccctctctgattacaacatccagaaggagtcaaccctgcac
ctggtccttcgcctgagaggtggcatgcagatcttcgtgaagaccctgaccggcaagacc
atcaccttggaggtggagcccagtgacaccatcgagaatgtgaaggccaagatccaggat
aaagagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctagaagat
ggccgcactctctctgattacaacatccagaaagagtcgaccctgcacctggtcctccgt
ctgaggggtggctattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3449)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (3442)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (36)   
   RefSeq(nuc) (2)   
   GenBank (17)   
   EMBL (17)   
Protein domain (9)   
   Pfam (9)   
All databases (3509)   

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