KEGG   Mus musculus (house mouse): 22352
Entry
22352             CDS       T01002                                 
Symbol
Vim
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04820  Cytoskeleton in muscle cells
mmu05169  Epstein-Barr virus infection
mmu05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    22352 (Vim)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    22352 (Vim)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    22352 (Vim)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    22352 (Vim)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mmu04812]
    22352 (Vim)
   04147 Exosome [BR:mmu04147]
    22352 (Vim)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     22352 (Vim)
Cytoskeleton proteins [BR:mmu04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     22352 (Vim)
Exosome [BR:mmu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   22352 (Vim)
  Exosomal proteins of other cancer cells
   22352 (Vim)
SSDB
Motif
Pfam: Filament Filament_head DUF1664 TolA_bind_tri DUF573 RBD-FIP TPR_MLP1_2 DUF4515 Sec10_N CENP-F_leu_zip
Other DBs
NCBI-GeneID: 22352
NCBI-ProteinID: NP_035831
MGI: 98932
Ensembl: ENSMUSG00000026728
UniProt: P20152 Q5FWJ3
Position
2:13579122..13587637
AA seq 466 aa
MSTRSVSSSSYRRMFGGSGTSSRPSSNRSYVTTSTRTYSLGSALRPSTSRSLYSSSPGGA
YVTRSSAVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAE
DIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDE
EIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFALEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPTFSS
LNLRETNLESLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgtctaccaggtctgtgtcctcgtcctcctaccgcaggatgttcggtggctccggcaca
tcgagccggcccagctccaaccggagctatgtgaccacgtccacacgcacctacagtctg
ggcagcgcactgcgccccagcactagccgcagcctctattcctcatcccccggtggcgcc
tatgtgacccggtcctcggcagtgcgcctgcggagcagcgtgccgggcgtgcggctgctt
caagactcggtggacttctcgctggccgacgccatcaacactgagttcaagaacacccgc
accaacgagaaggtagaactgcaggagctgaatgaccgctttgccaactacatcgacaag
gtgcgcttcctcgagcagcagaacaaaatcctgctggctgagctcgagcagctcaagggc
cagggcaagtcgcgcctgggcgacctgtacgaggaggagatgcgggagctgcgccggcag
gtggatcagctcaccaacgacaaggcccgtgtcgaggtggagcgggacaacctggccgag
gacatcatgcggctgcgagagaaattgcaggaggagatgctccagagagaggaagccgaa
agcaccctgcagtcattcagacaggatgttgacaatgcttctctggcacgtcttgacctt
gaacggaaagtggaatccttgcaggaagaaattgcctttttgaagaaactgcacgatgaa
gagatccaggagctgcaggcccagattcaggaacagcatgtccagatcgatgtggacgtt
tccaagcctgacctcactgctgccctgcgtgatgtgcgccagcagtatgaaagcgtggct
gccaagaacctccaggaggccgaggaatggtacaagtccaagtttgctgacctctctgag
gctgccaaccggaacaacgatgccctgcgccaggccaagcaggagtcaaacgagtaccgg
agacaggtgcagtcactcacctgtgaagtggatgcccttaaaggcactaacgagtccctg
gagcgccagatgcgtgagatggaagagaattttgcccttgaagctgctaactaccaggac
actattggccgcctgcaggatgagatccaaaacatgaaggaagagatggctcgtcacctt
cgtgaataccaagatctgctcaatgttaagatggccctggacattgagatcgccacctac
aggaagctgctggaaggcgaggagagcaggatttctctgcctctgccaaccttttcttcc
ctgaacctgagagaaactaacctggagtcacttcctctggttgacacccactcaaaaaga
acactcctgattaagacggttgagaccagagatggacaggtgatcaatgagacttctcag
catcacgatgaccttgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (119)   
   RefSeq(nuc) (1)   
   GenBank (59)   
   EMBL (59)   
Protein domain (10)   
   Pfam (10)   
All databases (151)   

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