KEGG   Mus musculus (house mouse): 22359
Entry
22359             CDS       T01002                                 
Symbol
Vldlr
Name
(RefSeq) very low density lipoprotein receptor
  KO
K20053  very low-density lipoprotein receptor
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu05017  Spinocerebellar ataxia
mmu05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    22359 (Vldlr)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    22359 (Vldlr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    22359 (Vldlr)
Membrane trafficking [BR:mmu04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Low-density lipoprotein receptor (LDLR) family proteins
    22359 (Vldlr)
SSDB
Motif
Pfam: Ldl_recept_a Ldl_recept_b FXa_inhibition cEGF EGF_CA SGL EGF hEGF
Other DBs
NCBI-GeneID: 22359
NCBI-ProteinID: NP_038731
MGI: 98935
Ensembl: ENSMUSG00000024924
UniProt: P98156 Q3UVX6
Position
19:27190070..27231631
AA seq 873 aa
MGTSARWALWLLLALCWAPRDSGATASGKKAKCDSSQFQCTNGRCITLLWKCDGDEDCAD
GSDEKNCVKKTCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISC
GARSTQCIPVSWRCDGENDCDNGEDEENCGNITCSADEFTCSSGRCVSRNFVCNGQDDCD
DGSDELDCAPPTCGAHEFQCSTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPVIHTKCP
TSEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDMSKVCDQEQDCRDWSDEPLKECHINEC
LVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVA
TLDGAKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQ
WPNGITLDLVKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEDDMENGGCEYLCL
PAPQINDHSPKYTCSCPNGYNLEENGRECQSTSTPVTYSETKDINTTDILRTSGLVPGGI
NVTTAVSEVSVPPKGTSAAWAILPLLLLVMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKT
TEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA
NT seq 2622 nt   +upstreamnt  +downstreamnt
atgggcacgtccgcgcgctgggcgctgtggctgctgctcgcgctgtgctgggcgccccgg
gacagcggcgccactgcaagcgggaagaaagccaaatgtgatagctcccagtttcagtgc
acaaatggccgctgcattaccctgctgtggaaatgtgatggagatgaagactgtgcggat
ggcagcgacgagaagaactgtgtaaagaagacgtgtgctgagtctgacttcgtgtgcaaa
aacggccagtgtgttcctaacagatggcagtgtgacggggatcctgattgcgaagacggt
tctgatgaaagccctgaacagtgccatatgagaacatgccgcataaatgaaatcagctgt
ggcgcccgttctactcagtgtatccccgtgtcctggagatgcgatggtgaaaatgattgt
gacaatggagaagatgaagaaaactgtggcaacataacatgtagtgcagatgagttcact
tgctccagtggccgctgcgtctccagaaactttgtgtgcaatggccaggatgactgtgac
gatggcagtgatgagctggactgtgctccaccaacctgcggagcccacgagttccagtgc
agcacctcttcctgcattcccctcagctgggtgtgtgatgatgacgcagactgttcagac
caatcagacgagtctcttgagcagtgtggccgtcagcctgtgatacataccaaatgtcct
accagtgagatccagtgtggctctggcgagtgcattcacaaaaaatggcggtgtgacgga
gaccctgactgcaaggacggcagcgatgaggtcaactgcccttctcgaacctgccgacct
gaccagtttgaatgtgaagatggtagctgtatccacggcagcaggcaatgcaatggcatc
cgagactgtgttgatggctctgatgaagtcaactgcaaaaacgtcaatcagtgcctgggc
cctggaaagttcaagtgcagaagcggggaatgcatagacatgagcaaagtatgtgaccag
gaacaagactgcagagactggagtgacgagcccctgaaggaatgccatatcaacgaatgc
ctggtcaataatggtggctgttcccatatctgcaaagacctagttataggttatgagtgt
gattgtgcagctgggtttgaactgatagataggaaaacctgtggagatattgatgaatgc
caaaacccggggatctgcagtcaaatttgtatcaacttaaaaggcggttacaagtgtgaa
tgtagtcgtggctatcaaatggatcttgccactggcgtgtgcaaggcagtaggcaaagag
ccgagtctgatcttcactaatcgaagagacatcaggaagattggcctagagagaaaggaa
tacatccaacttgtagagcaactaaggaacacggtggctctcgatgcggacattgcagct
cagaagctgttttgggctgatctcagccagaaggccatcttcagtgcctcaattgatgac
aaggttggtagacattttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggactgatgcggcttctaagactatttcagtagct
accctagacggagccaagaggaagttcctgtttaattctgacttgcgagagcctgcctcc
atagctgtggatccgttgtcgggctttgtttactggtcagactggggcgagccagctaaa
atagaaaaagcaggaatgaatggatttgatagacgtcctctggtgacggaggacatccaa
tggcctaatggaattacactcgaccttgtcaaaagccgcctctactggctggattccaag
ttgcacatgctctctagtgtggacctgaatggtcaagatcgtaggatagtgctcaagtct
ctggagttcctagctcatcctcttgcactcaccatatttgaggatcgcgtctactggata
gatggagaaaatgaagcagtgtacggtgccaataaattcactgggtcagagctggccact
ctagtgaataatctcaatgatgcccaagacatcattgtctaccatgaactcgtccagccg
tcaggtaaaaactggtgtgaagacgatatggagaatggaggatgtgaatatctctgcctg
ccagcaccacagatcaatgaccactctccaaaatatacctgttcctgtcccaatgggtac
aatctcgaagaaaatggacgagagtgtcaaagtacttcaactcctgtgacttacagtgag
acaaaagatatcaacacaacagacattctacgaactagtggactggttcctggagggatc
aatgtgaccacagcagtatcagaagtcagtgttcccccaaaagggacttcagctgcctgg
gccatccttcctctcttgctcttagtgatggcagcagtaggtggctacttgatgtggagg
aattggcaacataaaaacatgaaaagcatgaactttgacaatcctgtgtacttgaagacc
actgaagaggacctgtcgatagacattggtagacacagcgcttctgtaggacacacatac
ccagcaatatcagttgtaagcacagatgatgatctggcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (16)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (13)   
DNA sequence (39)   
   RefSeq(nuc) (17)   
   GenBank (11)   
   EMBL (11)   
Protein domain (8)   
   Pfam (8)   
All databases (91)   

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