KEGG   Mus musculus (house mouse): 224829
Entry
224829            CDS       T01002                                 
Symbol
Trerf1, 9430096I18Rik, B830015H24, RAPA, Trep-132, Trep132
Name
(RefSeq) transcriptional regulating factor 1
  KO
K26583  transcriptional-regulating factor 1
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    224829 (Trerf1)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    MiDAC complex
     224829 (Trerf1)
SSDB
Motif
Pfam: zf-C2H2_6 ELM2 zf-C2H2_4 zf-C2H2 Myb_DNA-binding zf-met zf-C2H2_2 Myb_DNA-bind_7
Other DBs
NCBI-GeneID: 224829
NCBI-ProteinID: NP_766210
MGI: 2442086
Ensembl: ENSMUSG00000064043
UniProt: Q8BXJ2
Position
17:47451868..47673250
AA seq 1205 aa
MGDQQLYKTNHVGHGGENLFYQQPPLGVHSGLGHSYGNTISGAGMDAPQASPISPHFPQD
TRDGLGLPIGSKNLGQMDTSRQGGWGSHAGPGNHVQLRSNLANSNMMWGTPTQVEPADGY
QYTYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTQSAVMDGASDSA
LRQLLSQKPVEPSASAIASRYQQVPQQPHPGFTGGLPKPALPVGQHAPQGHLYYDYQQPL
AQMSMQGGQPLQAPQVLSGHMQQLQQHQYYPQPPPQQQQAGLQRISVQEMQQQQQPQQIR
PSPPQQQQQLQLQQRQSSLQIPQYYQPQPMMQHLQEQQQPSMHLQPPSYHRDPHQYTPEQ
AHAVQLIQLGSMPQYYYQEPQQAYSHPLYPQSHLSQHQQREDGQLKTYSSDRQTPAMLSS
HGDMGTSDTGVADPASSEMTRVTSTLPHQPLLSPSGIHLNNMGSQHQQPPSPSAMWPQMH
LPDGRAQSGSPESSSGQTKGVFGEQFDAKNKLTCSICLKEFKSLPALNGHMRSHGGMRAS
PSLKQEEGEKAPPPQPQPQPQPQQPLPPPPPPPPPPQLPPEAERLTPMVMPVSVPVKLIP
PKPSSQGFTNSVAATPAARDKPASSMSDDEMPVLEIPRKHPPIAAKVEEPLKNLPEKKKF
RHRPEPLFIPPPPSSYTPNPTSYSGATLYQSQLRSPRILGDHLLLDPAHELPPYTPPPML
SPVRQGSGLFSNVLISGHGPGVHPQLPLTPLTPTPRVLLCRSSSIDGSNVTVTPGPGEQT
VDVEPRINIGLRFQAEIPELQDVSALAQDTHRATLVWKPWPELENQALQQQVENLLNLCC
SSALPGGGTNSEFALHSLFEAKGDVMATLEMLLLRKPVRLKCHPLANYHYAGSDKWTSLE
RKLFNKALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKKIMRLGRKHRTRLAEIIDDCMT
SEEEEEAEEEEEDPEEDRKSIKEEESEVAKSPEPPPAPALAPTEGPPMQAVGQQPSGNFI
CEMPNCGAVFSSRQALNGHARIHGGTNQVAKTRGAIPSGKQKPGGTQSGYCSVKSSPSHS
TTSGETDPTTIFPCKECGKVFFKIKSRNAHMKTHRQQEEQQRQKAQKAAFAAEMAATIER
TTGPVGAPELLPLDQLSLMKPVKDVDILDDDVVQQLGVMDEAEVVGTDLLLDDQDSVLLQ
GDTEL
NT seq 3618 nt   +upstreamnt  +downstreamnt
atgggggaccagcaactgtacaagaccaatcacgtgggccacggtggtgagaacctcttc
tatcaacagccaccccttggtgtccacagtgggctgggccacagctatgggaatacaatc
tctggggctgggatggacgccccgcaggcctcacccatctcgcctcacttccctcaagat
actcgggatggtctcggcttgcctattggctccaaaaaccttggccagatggatacctcc
aggcagggaggatggggaagccatgcagggcctgggaaccacgtccagcttcgtagcaac
ttggccaactcaaacatgatgtgggggacgcccacccaggtggagcccgctgatggctac
caatacacttattcccaggccagcgagatccggacccagaaactcaccagtggtgttttg
cacaagctggactctttcacccaggtatttgccaaccaaaacctgcggattcaggtcaac
aatatggcccaggtgctgcacacccaatcagcggtgatggatggagcctccgacagtgcc
ctccgtcaactgctgtctcagaagcccgtggagccctcagcatcagctatagcttcccgc
taccagcaggtgccccagcagcctcaccctggcttcacgggtggactgcccaaaccagcc
cttccagtcgggcagcacgctccccaagggcacctgtattatgactaccagcagcccctg
gcccagatgtccatgcaaggaggacagccactgcaagcccctcaggtgctgtccggccat
atgcaacaattgcagcagcaccagtattacccacagccgccgcctcagcagcagcaagcc
ggactgcagcggatctctgtgcaggagatgcagcagcagcagcagccgcagcaaattcgc
ccctcaccacctcagcagcagcagcagctccagctgcagcagcggcagagttcactgcag
atacctcagtattatcagccccaacccatgatgcaacacttgcaagagcagcagcagcca
tccatgcacctgcagccaccctcataccacagggaccctcatcagtataccccggagcag
gcacacgctgtccagctgatccagctgggctctatgccccagtattactatcaggagcct
caacaggcctatagccaccccctctacccgcagagccacctgtcccagcaccagcagcgt
gaagacggtcagctgaagacatattctagtgacagacagaccccggctatgctgagctcc
catggggacatgggaacttctgatacaggagtggcagatccagccagctcagaaatgact
cgggtcactagtactcttcctcaccaaccgctcctgtcccccagtgggatccacctcaac
aacatggggtctcagcatcaacagccgccatctcccagtgcgatgtggccccagatgcac
ttacctgatgggagagcccagtccggatccccggaatcaagcagcggccaaaccaaagga
gtgtttggggaacagtttgatgccaagaacaagctgacatgctccatctgcctgaaggag
ttcaaaagcctgcccgccctgaacggccacatgcggtcccacggggggatgagggcgtcc
cccagcctcaaacaggaggaaggagagaaggccccaccgcctcagcctcagccccagcct
cagccccagcagccactgccacctccgcctcctccgccgccgccaccgcagctccctcct
gaggcagagcgcctcacgcctatggtcatgcccgtgtctgtccctgtcaagctaatccca
cccaagcccagctctcaggggttcaccaacagcgtcgctgccacccccgcggccagagac
aagccagccagctcgatgtcggacgacgagatgcctgtgctcgaaatcccccggaaacat
ccacctatcgccgccaaagttgaggagcccctcaagaacctaccagagaagaagaaattc
cggcaccggcctgagcccctcttcatcccaccaccgccttcgtcctatactcccaacccc
acctcttactcgggggccaccctgtaccagagccagctgcgctccccgcgaatcctcggg
gaccacctgctcctggaccccgcccacgaactgcccccctacacgccgccacccatgctg
agccctgtgcgccagggctcagggctcttcagcaatgtcctcatctctggccacggccct
ggagtgcacccccagctgcccctcactcccctcacgcccacgccacgtgtgctgctgtgc
cgttccagcagcatcgatggcagcaatgtgacagtcaccccaggacctggagagcagact
gtggatgttgaaccacgcatcaacattggcttaaggttccaagcagagatcccagaactg
caagacgtctccgccctggctcaggacacacacagggccacactggtatggaagccgtgg
cctgagctggaaaaccaggccctccagcagcaagtggagaatcttctgaatttgtgttgt
tccagtgcgctgccaggtggaggaaccaattcggaatttgctttgcactctctctttgag
gccaaaggtgacgtgatggctaccctggaaatgctgctgctgcggaagccagtcaggtta
aaatgtcatcctttagcaaattaccactacgccggttctgacaagtggacatccctagaa
agaaaactgtttaataaagcattggccacttacagcaaagactttatttttgtacagaag
atggtgaagtccaagacagtggctcagtgcgtggagtactactacacttggaagaagata
atgcgactaggccggaaacaccggacacgcctggcggaaatcattgacgactgcatgacc
agcgaagaggaagaggaggccgaggaggaagaagaggacccagaagaagataggaaatcc
ataaaagaagaggagagtgaagtggccaagtctccagagccaccgcctgcccctgccctg
gctcccactgaggggccacccatgcaggctgttggccaacaaccatcaggcaacttcatt
tgtgaaatgcccaactgtggggctgtgttcagctcccgacaggcactgaacggtcacgcc
cgcatccacggcggcaccaaccaggtggctaagacccgaggtgccatcccctctgggaag
cagaagccaggtggcacccagagtgggtactgctcagtgaagagttcaccatctcacagt
accaccagtggagagacggaccccaccaccatcttcccctgcaaggagtgtggcaaggtc
ttctttaagatcaaaagccggaatgcgcacatgaaaacccaccggcagcaagaggagcag
cagaggcagaaggctcagaaggcagccttcgcagcagaaatggcagccaccatcgagagg
actacggggccggtgggggcgcccgagctgctgcccctggaccaactgagtctgatgaag
ccagtcaaggacgtggacatcctggatgacgatgtggtccagcagttaggcgtcatggac
gaggccgaggtggtaggcacggatcttctcttggacgaccaagattcggttttgcttcag
ggtgatacagaactctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (32)   
   RefSeq(nuc) (2)   
   GenBank (15)   
   EMBL (15)   
Protein domain (8)   
   Pfam (8)   
All databases (78)   

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