KEGG   Mus musculus (house mouse): 225160
Entry
225160            CDS       T01002                                 
Symbol
Thoc1, 3110002N20Rik, NMP-84
Name
(RefSeq) THO complex 1
  KO
K12878  THO complex subunit 1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03013  Nucleocytoplasmic transport
mmu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    225160 (Thoc1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    225160 (Thoc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    225160 (Thoc1)
   03041 Spliceosome [BR:mmu03041]
    225160 (Thoc1)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     225160 (Thoc1)
Spliceosome [BR:mmu03041]
 Complex C
  Other components
   EJC/TREX
    225160 (Thoc1)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    225160 (Thoc1)
SSDB
Motif
Pfam: efThoc1 Death bDLD3 HsdM_N
Other DBs
NCBI-GeneID: 225160
NCBI-ProteinID: NP_705780
MGI: 1919668
Ensembl: ENSMUSG00000024287
UniProt: Q8R3N6
Position
18:9958176..9995486
AA seq 657 aa
MSPTPALFSLPEARTRFTKSTREALNNKNIKPLLTAFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSACENVLAIISLAIGGVTESVCTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERASDTKPTRVVRKRAAPE
DFLGKGPNKKILIGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ESEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPITGEQIESFANKLGEQWKILAPYLEIKDSDIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATTDNLISALNKSGLSDLAESLTNDTETNS
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgtctccgacgccggcgcttttcagtttgccggaggcgcggacgcgatttacgaaatct
accagagaagccttgaataacaaaaatatcaagccgttgttgactgccttcagtcagtta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctggaa
gaagaaattataaatcattccgcatgtgagaacgttttagctattatttctcttgctatt
gggggagtgaccgaaagtgtttgtactgcgtccacaccatttgtgctattgggagatgtc
ttagactgccttcctttggatcagtgtgacacaatattcacttttgttgaaaaaaatgtt
gctacttggaagtcaaatacattctattctgctggcaaaaattatttactgcgtatgtgc
aatgatctcctcagaagattgtctaaatctcagaatacagttttctgtggaagaattcaa
ctctttttggccaggctttttcctctatctgagaaatcaggtcttaatttgcagagtcag
tttaacctggaaaacgtcactgttttcaatacaaacgagcaggagagcaccctgggtcag
aagcatactgaggatagagaggaagggatggatgtagaagaaggtgaaatgggagatgat
gaagccccgacaacttgttctattccaattgattacaacctgtatagaaaattctggtca
cttcaggattacttcaggaacccagtgcaatgctatgagaagatttcttggaaaacgttt
ctcaagtattctgaagaagttttagctgtttttaaaagttataaattagatgatactcaa
gcctccaggaaaaagatggaagaattgaaaacaggaggagagcatgtatacttcgccaag
tttctaacaagtgaaaagttgatggatttacaactgagtgacagtaactttcgtcgacac
atcctgttgcagtatctcattttatttcaatatctcaagggacaggtcaaattcaaaagt
tcaaattatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtc
taccaactgctatctgaaaatccccctgatggagaaagattttcaaagatggtagagcat
atattaaacactgaggaaaattggaactcatggaagaatgaaggttgcccaagttttgtt
aaagaaagagcgtcagataccaagcccacaagagtggtgaggaagagagcagccccagaa
gacttcttaggcaaagggcccaacaagaaaatcctcattggaaatgaggagctcacaagg
ctttggaatctctgtcctgataatatggaagcctgtaaatcagagacaagagaatacatg
ccaactttggaggagttctttgaagaagctattgaacaagcagatcctgaaaacatggtt
gaaagtgaatataaagccgtaaataattcaaattatggatggagagctcttagactctta
gcccggagaagccctcacttctttcagccaaccaaccagcagtttaagagtctaccagag
tatctggaaaacatggtgataaagctggccaaggaactaccacccccttctgaagaaata
aagacaggtgaggatgaagacgaggaagataatgatgctttactaaaggaaaatgaaagt
ccagatgttcggcgagataaacctataacaggggagcagatagagtcatttgccaacaaa
cttggtgagcagtggaagattttggctccttacctggaaattaaagactctgatattagg
cagattgagtgtgacagtgaagacatgaagatgagagccaagcagctccttgttgcctgg
caagatcaagaaggagttcatgcaacaactgataacctgattagtgcactaaacaagtct
ggattaagtgaccttgcagaaagtctaactaatgacactgaaacaaacagttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (9)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (45)   
   RefSeq(nuc) (7)   
   GenBank (19)   
   EMBL (19)   
Protein domain (4)   
   Pfam (4)   
All databases (77)   

Download RDF
DBGET integrated database retrieval system