KEGG   Mus musculus (house mouse): 22596
Entry
22596             CDS       T01002                                 
Symbol
Xrcc5, CTC85, CTCBF, Ku80, Ku86
Name
(RefSeq) X-ray repair complementing defective repair in Chinese hamster cells 5
  KO
K10885  ATP-dependent DNA helicase 2 subunit 2
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    22596 (Xrcc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmu03400]
    22596 (Xrcc5)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     22596 (Xrcc5)
SSDB
Motif
Pfam: Ku_N Ku Ku_PK_bind Ku_C DUF6005
Other DBs
NCBI-GeneID: 22596
NCBI-ProteinID: NP_033559
MGI: 104517
Ensembl: ENSMUSG00000026187
UniProt: P27641
Position
1:72346576..72434112
AA seq 732 aa
MAWSGNKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYG
TDGTDNALAGKDQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQR
ETIGKKFGKKHIEVFTDLSSPFSQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPGERGD
LDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCVFKKI
ERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKFKKSWVVVDARTLKKEDIQKETVYCLNDD
DETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHRRFFMGHQ
VLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDKRSNPQVGVAFPYIKDAYECLV
YVQLPFMEDLRQYMFSSLKNNKKCTPTEAQLSAIDDLIDSMSLVKKNEEEDIVEDLFPTS
KIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDPPTEMKAKCESPLSKVKTLFPLT
EVIKKKNQVTAQDVFQDNHEEGPAAKKYKTEKEEDHISISSLAEGNITKVGSVNPVENFR
FLVRQKIASFEEASLQLISHIEQFLDTNETLYFMKSMDCIKAFREEAIQFSEEQRFNSFL
EALREKVEIKQLNHFWEIVVQDGVTLITKDEGPGSSITAEEATKFLAPKDKAKEDTTGPE
EAGDVDDLLDMI
NT seq 2199 nt   +upstreamnt  +downstreamnt
atggcgtggtccggtaataaggcagctgttgtgctgtgtgtggatgtgggggttgccatg
ggtaactcctttcctggtgaagaatctccaattgaacaagcaaagaaagtgatgactatg
tttgtccaacgacaggtattttcggagagcaaagatgagattgcgttagtcctctatggc
acagatggcactgataatgcccttgctggcaaggaccagtatcagaacatcacagtgtgc
agacacctgatgctaccagattttgatttgctggaagacatcggaaacaaaatccagcca
agttcccagcaagccgacttcctggacgccctgattgtgtgcatggatttgattcagcgt
gaaaccatagggaagaagtttgggaagaagcatattgaagtgttcactgacctcagcagc
ccgttcagccaggaccaactggacgttataatttgtaacttgaagaagtctggcatctct
ctgcagttctttttgccttttccaatcgacaagaatggcgagcctggcgagagaggggac
ctggactctggcttggaccacctcaaaccctccttccctcaaaaaggacttactgagcag
caaaaggaaggcatccgcatggtgacaagggtgatgctgtccttagaaggcgaagacggg
ctggatgaaatttattccttcagtgagagtctacgacaactgtgcgtctttaagaagatt
gagaggcgttccatgccctggccctgccaactgaccattggccccaacttgtctataaag
attgtagcctataaatcgattgtacaggagaaatttaagaagagttgggtagttgtggac
gcaagaacgctaaagaaggaagatatacaaaaagagactgtttattgcctaaatgacgat
gatgaaactgaagtttccaaagaggacactattcaagggtaccgctacggaagtgatatc
attcctttttctaaagtggatgaggaacaaatgaaatataaatctgaggggaagtgcttc
tctgttttgggattttgtaaatcttctcaggttcatagaagattcttcatgggacatcaa
gttctaaaggtctttgcagcaaaggatgatgaggcggcagctgttgccctttcctctctc
gttcatgctttggatgagttaaacatggtcgccatcgtccgatatgcttatgacaaaaga
tctaatcctcaagttggtgtagccttcccttacattaaggacgcctatgagtgtttagtt
tatgtgcagctgcctttcatggaagacttgcggcaatacatgttttcctcgctgaaaaac
aataagaagtgcactcccacagaggcccagctgagcgctattgatgatctgattgattcc
atgagcttggtaaagaaaaacgaggaagaagacattgttgaagatttgtttccaacctcc
aaaattccaaatcctgaatttcagcgattgtaccagtgtctgctgcatagagccttacat
ctccaggagcggctgcccccgattcagcagcacattttgaatatgctggatccccccact
gagatgaaagcaaaatgtgagagtccactctctaaagtaaagacccttttccctctcaca
gaagtcatcaagaaaaagaaccaagtgactgctcaggacgttttccaagacaatcatgaa
gaggggcccgctgctaaaaaatataaaactgagaaagaagaagatcacatcagcatctcc
agcctggcagaagggaacatcaccaaggttggaagtgtgaatcctgttgaaaacttccgt
ttcctagtaagacagaagattgccagctttgaggaagcgagtctccagttaataagtcac
atcgaacaatttttggataccaatgaaacactgtattttatgaaaagtatggactgcatc
aaagctttccgggaggaggccattcagttttcagaagaacagcgcttcaacagcttcctg
gaagcccttcgagagaaagtggaaattaagcaattaaatcatttctgggaaattgttgtt
caggatggagttactctgatcaccaaagacgaaggcccaggaagctctatcacagctgag
gaagccacaaagtttctggcccccaaagacaaagcaaaagaagatacaacgggacctgaa
gaagctggtgatgtggatgatttactggacatgatatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (43)   
   RefSeq(nuc) (5)   
   GenBank (19)   
   EMBL (19)   
Protein domain (5)   
   Pfam (5)   
All databases (80)   

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