KEGG   Mus musculus (house mouse): 227099
Entry
227099            CDS       T01002                                 
Symbol
Pms1
Name
(RefSeq) PMS1 homolog 1, mismatch repair system component
  KO
K10864  DNA mismatch repair protein PMS1
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmu03400]
    227099 (Pms1)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     227099 (Pms1)
SSDB
Motif
Pfam: DNA_mis_repair HMG_box HMG_box_2 HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 227099
NCBI-ProteinID: NP_705784
MGI: 1202302
Ensembl: ENSMUSG00000026098
UniProt: Q8K119
Position
1:complement(53225794..53336190)
AA seq 917 aa
MKQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGATSIEVKLENYGFDKIEIRDNGEG
IKAVDVPVMAVKYYTSKISSHEDLGNLTTYGFRGEALGSICNVAEVVVTTRTSADDFSTQ
YVLDGSGHILSQKPSHLGQGTTVTALKLFKNLPVRKQFYSTAKKCKDELKNVQDLLISYG
VLKPDVRITFVHNKAVIWQKSRVPDHRMALMSVLGTAVMGNMESVEQHCEQSQIYLSGFF
PKHDADHNSTSLSTPERSFIFINSRPVHQKDILKLIRRYYNLKCLKESTRLYPIFFLKID
VPSAEVDINLTPDKSQVLLQNKESVLIALENLMMTCYGPLPTTESSENNRVDISSANMVV
SQTAETDVLFNKMESFGNNYPNADTSAIHFQKDESRKNIDHHLNEQINIGNYFDGHFSGD
INKDTFQNIPMNNLSSETNQSNHSETHSVGSMEHIQGENGRNGTGGSGGDGRETLPEKAL
EICADDWSKGNLCNSMGENIEPVKILVPQKSLSCKVTSSHPRLEPETLSDGPCSRTSDVI
HNRSGRLTAYDLISSRAVKKPMSASALFIQDHRTQFLTENPKTGLEDATEQIKARWETLS
EEEKHKYEEKAKKDLERYNNQMKKAIEQETQVSLKDGRKKRATSSWGWTQKHKVKDSSNQ
PKLDELFQSQNEKKKSENIKITEIPFSMENLKANLKKQKEVDLEEKDEIYLIHSLKFPDS
WLVTSRADVMLLNPYRVEEALLFKRLLENHKLLAEPLEKPIILTESLLNGSHYLEVLYKM
STVEERGSGSAYLCDPRLTANGFKIRLTPGVSSTENYLEIEGMAQCLPFYGIMDLKEILN
AIVNKNAKEIYECRPRKVINYLEGEAVRLSRQLPMYLPREDVQDLIYRMKHQFGKEIKGC
VHGRPFFHHLTHLPGTS
NT seq 2754 nt   +upstreamnt  +downstreamnt
atgaaacagttgcctgcagcaacagttcgcctcctgtccagttctcagacaatcacgtca
gtggtcagcgttgtgaaagagctcattgaaaactccttggatgccggagccaccagcatt
gaagttaaactggagaactatggatttgataaaattgagattcgggacaatggtgagggc
atcaaggctgtagatgtccctgtaatggcagtgaagtactacacctcgaagatcagcagt
catgaagaccttggaaatctgacaacttatggttttcgtggtgaagccttggggtcaata
tgtaatgttgcggaggtggtagttacaacaaggacatctgctgatgactttagcactcag
tatgttttagatggcagtggccacatactttctcagaagccttcacatcttggtcaaggt
acaactgtaactgctctaaagttgtttaagaatctgcctgtaagaaaacaattttactca
acagctaaaaagtgtaaagatgaactaaaaaatgtacaggaccttctcataagctacggt
gtcctgaaacctgatgtgaggattacttttgtacataataaggcagttatttggcagaaa
agcagagttccagatcacaggatggctctaatgtcggttctgggaactgctgtcatgggc
aacatggaatctgttgagcagcactgtgaacagtcgcagatttacctaagtggattcttc
ccaaagcacgatgcagaccacaattccacaagtctttcaaccccagagagaagtttcatc
tttattaatagtcggccagtacatcaaaaagatatactaaagttaattcgacgctattat
aatctgaagtgcctaaaggagtctacccgcttgtatcccattttctttctgaaaattgat
gttccatcagctgaggtggatataaatctaacaccagataaaagtcaagtgttattacag
aataaggaatctgttttaattgctcttgaaaatctgatgatgacctgttacggaccacta
cccactacagagtcttctgaaaataacagagtagatatttcctcagccaacatggttgtt
agtcaaacagccgaaacagatgtgctttttaataaaatggaatcatttggaaataattat
ccaaatgctgatacttcggctattcacttccaaaaggatgaatctagaaaaaacattgat
catcatttaaatgaacagataaatataggcaattattttgatggtcattttagtggtgac
attaataaggacacatttcaaaatattcctatgaataatttatcatcagagactaatcag
agtaatcacagtgaaactcattctgtaggttctatggagcacatccaaggagaaaatggc
aggaatggtacaggaggaagtgggggagatgggagagaaacacttcctgagaaagctctg
gaaatctgtgcagacgattggagcaaaggaaatttgtgtaattcaatgggagagaatatc
gaacctgtgaaaattttagtgccacaaaagagcttatcatgtaaagtgaccagtagtcac
ccacgccttgaaccagagactctcagtgatggtccttgtagcagaacatcagatgtaatc
cataacagatctggacggcttacagcctatgacttaattagcagtcgagcagtcaagaag
cccatgtcagccagtgccctgttcattcaagaccaccgcactcagttcctcacagagaat
cccaagactggtttggaggatgcgacagaacaaatcaaagcacgatgggagacactgagt
gaagaggaaaagcacaaatacgaggaaaaggctaaaaaagacttggaacgatacaataac
caaatgaagaaagctattgaacaggagacacaagtatcattgaaagacggcaggaaaaaa
agggccaccagttcgtggggctggacacagaaacataaggtgaaagactcatctaatcag
ccaaaacttgatgagctctttcagtcccagaatgaaaagaagaagagtgaaaatattaaa
ataacagagattcccttttctatggaaaacttaaaagcgaacttgaagaaacaaaaggaa
gttgacttagaggagaaggatgagatttacctgatccacagtctcaagtttcctgattcg
tggctggtcacgtccagagccgatgtcatgttactgaacccatacagagtggaggaagcc
ctgctatttaaaagacttcttgagaatcataaactccttgcagaaccactggaaaagcca
attatattaacagagagtcttcttaatgggtctcattatctagaggttttatataaaatg
tcaacagttgaagaaagaggcagtggatcagcttacctgtgtgaccctcgtcttacagca
aatggcttcaagatcagattgacaccaggagtttccagtactgagaactacttggaaata
gaaggaatggctcagtgtctcccattctatggaataatggatttaaaggaaattcttaat
gctatagtaaacaaaaatgcaaaggagatttatgaatgtagacctcgaaaagtaataaat
tatctggagggagaagccgtccgtctatccagacagctacccatgtacttaccaagagag
gatgtccaagatcttatctatagaatgaagcaccagttcggaaaagaaattaaaggctgt
gttcatggccgcccattttttcatcatttgacccatcttccaggaacttcatga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (11)   
   UniProt (1)   
   RefSeq(pep) (10)   
DNA sequence (18)   
   RefSeq(nuc) (10)   
   GenBank (4)   
   EMBL (4)   
Protein domain (5)   
   Pfam (5)   
All databases (61)   

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