KEGG   Mus musculus (house mouse): 227699
Entry
227699            CDS       T01002                                 
Symbol
Nup188
Name
(RefSeq) nucleoporin 188
  KO
K14311  nuclear pore complex protein Nup188
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03013  Nucleocytoplasmic transport
mmu05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    227699 (Nup188)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    227699 (Nup188)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    227699 (Nup188)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     227699 (Nup188)
SSDB
Motif
Pfam: Nup188_N-subdom_III Nup188_N Nup188_SH3-like
Other DBs
NCBI-GeneID: 227699
NCBI-ProteinID: NP_938046
MGI: 2446190
Ensembl: ENSMUSG00000052533
UniProt: Q6ZQH8
Position
2:30176419..30234278
AA seq 1759 aa
MAAAAGGPCVRSSRELWTILLGRSALRELNQIEAELNKYWQRLLEGLSYYKPPSPSSAER
VKANKDVASPLKELGLRVSKFLGLDEEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQA
LTLKIADYYYEERTCILRCVLHLLTYFQDERHPYRAEYADCVDKLEKELVLKYRQQFEEL
YRTEAPTWETHGNLMTERQVSRWLVQCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKMFK
EQGFGSRQTSRHLVGGTMDPFVDRIGYFSALILVEGMDIESLHKYALDDRRELHQFAQDG
LICQDMDRAMLTLGDIPHHAPVLLAWALLRHTLSPEETSSVVRKIGGTAIQLNVFQYLTR
LLRSLASGGNDCTTSTACMCVYGLLSFALTSLELHTLGNQQDVIDTACEVLADPSLPELF
WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELHKH
KPHDVLSHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT
LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL
TTVISPPVNVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAHPVSNMTQMISAEGMNA
GGYGSLLMNSEQPQGEYGVTIAFLRLVTTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHK
WRYNSHGVRELIGCLILELIHAILNLCQETELHSSHTPSLPSLCICSLAYTEAGQTVISI
MGIGVDTIDMVMAAQPRSDGPEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA
LTQHGAHGNNLIAVLAKYIYHRHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDA
FLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSNGSKEFSLGVWSCLH
VVLELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT
LSPPSETSEPSVLETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSSEKRFAYWSGYVK
SLAVYMADTEGSSCTSLLEYQMLVSAWRILLIIAASHADVMHLTDMAVRRQLFLDVLDGT
KALLLVAASVNCLRLGSMMCTLLLILLRQWKRELGAVEKILGPLTEILEGVLQADQQLME
KTKAKVFSAFITVLQMKELRVGDIPQYSQLVLNVCETLQEEVIALFDQTRHSLASDSAAE
DKDSMETDDCPRPRHKDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLLTTL
EVSLRMKQNLHFTEAALHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSSNGTGQT
PSTSRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERTLQCLNAVKTV
QSLACLEEADHTVGFILQLSHFRKEWHFHLPQLMRDVQVNLGYLCQACTSLLHSRKMLQH
YLQNKNGDGLPSAVTPRAQRPSTTTTTTTTTTALATPAGCSSKQPTADTEASEQRALHTV
QYGLLKILSRTLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTL
LATVNVALNMLGELDKKKESLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAVRYL
RDPAVHPRDKQRMKQELSSELSTLLSSLSRYFRRGAPSSPAAGVLPSPQGKATSLSKASP
ESQEPLIQLVQAFVRHVQR
NT seq 5280 nt   +upstreamnt  +downstreamnt
atggcggctgccgctggtgggccgtgtgtgaggagcagtagagaactctggacaattcta
cttgggaggtcagctcttagagaattgaatcagattgaggcggaactgaataaatattgg
cagcggttgttagaagggctttcttactacaaacctcccagtccaagttcagctgaaaga
gtgaaagctaataaagacgtagcgtcacctctgaaggagctgggcctaagagtcagcaag
ttcttgggtcttgatgaagagcagagtgtgcagttactgcagtgttaccttcaggaggat
tacaggggtactcgggactcactaaagacagtcctgcaagatgagaggcagagccaggcc
ttaaccctgaagattgcagattattattatgaagaaagaacctgcattcttcgttgtgtc
ttacaccttctgacatatttccaagatgaacgccatccatacagggcggaatatgctgac
tgtgttgacaaactggagaaggaactagttttaaagtaccggcagcagtttgaggagctg
tatagaacagaagcaccaacctgggagacgcatggcaacctcatgactgagcgtcaggtg
tcgcggtggttggttcagtgcctccgggaacagtccatgctgttagaaattattttcctt
tattatgcatacttcgagatggcaccaagtgacctattggtactaaccaagatgttcaag
gagcaagggtttggtagtaggcagaccagcaggcaccttgtgggtggaaccatggatcct
tttgtagatcgcattgggtacttcagtgccctcatcctggtggaagggatggacatcgag
tccctgcacaagtacgccttggatgacaggcgagagctgcaccagtttgctcaggatggc
ctcatctgccaggacatggaccgagcgatgttgaccttgggagacattccgcaccacgcc
cctgtgcttttagcctgggctctcctccgtcacacactgagcccagaagagaccagcagt
gtggtcaggaagatagggggcacggccatccagctgaatgtgtttcagtacttgactcga
ctgcttcggtcacttgccagtggaggaaatgattgcaccacgagcaccgcctgcatgtgt
gtctatggtcttctctcctttgccctcacctcactggagctgcacacactgggcaaccag
caggatgtcattgacacagcatgtgaagtcctggcagacccttcccttccagagctgttc
tggggaacagagccaacctctggtctcgggatcattctggacagtgtgtgtgggatgttt
ccccatctcctttccccacttctgcaattgctccgagccctcgtgtcagggaagtccact
gccaaaaaagtgtacagcttcctggataaaatgtctttctacaacgaactccataagcac
aagccccatgatgtgctctctcatgaagatggaactctgtggcggaggcaaacacccaaa
ctcctgtaccctctagggggtcagaccaaccttcgcattcctcagggcactgtgggccaa
gtcatgctggatgacagggcttaccttgtccgctgggagtactcttacagcagctggacc
ctcttcacctgcgagattgaaatgctgctccacgttgtctccacagcagatgtgatccag
cattgccagcgggtcaagcccatcattgatttggttcataaggtcatcagcacagacttg
tccatagcagactgcctgctgcccatcacatcccgcatctacatgctgttgcagcggctg
acgacggtgatctcccctcctgtaaacgtcattgcttcttgtgtcaactgcttaactgtc
ttggctgctcgaaacccagcaaaggtctggactgatcttcgtcacacaggttttttgcca
ttcgtggcccaccctgtctccaacatgactcagatgattagtgcggagggaatgaatgct
ggagggtatggcagccttctgatgaacagtgagcagccccagggcgaatatggggtcacc
attgcctttctgcgcctggtcaccacgcttgtcaaggggcagcttggtagtacccagagc
caaggcctggtgccttgtgtgatgttcgtgttgaaggagatgcttcccagctaccacaaa
tggcgctacaactctcatggcgtgcgagagctgataggttgcctaattctggagctgatt
catgcaatactgaacctgtgccaagagacagagctgcatagcagccacacacccagcctg
ccttccctctgcatctgcagcctggcttataccgaagctggacagaccgtcattagcatc
atgggaattggtgtagacaccatagacatggtgatggctgctcagccccgcagtgatggg
ccagaaggccaaggccagggccaactgctgatcaagacagtgaagctggcgttctctgtc
accaacaatgttattcggctgaaacctccttctaatgtggtttcacccctggaacaggct
ctcacacaacatggtgcccacgggaacaacctcattgctgtcctagccaagtacatctac
cacagacatgacccagccttgccacgtctggccatccagctgctgaaacgcttggccacg
gtggccccaatgtcagtgtatgcttgcctgggcagtgatgcagcggccatccgtgatgcc
ttcctgacccgccttcagagcaagattgaggacatgcgcatcaaagtcatgatcctggag
ttcctgacagtggcggtagagacacagccaggtctcatcgagctgtttctgaatctggag
gtgaaggatggcagcaatggctccaaggaattcagccttggtgtgtggagctgtctccat
gtggtgctggagctgattgattcccagcagcaagatcgatactggtgcccacctctgttg
catcgtgcagctattgccttccttcatgccctgtggcaagaccgtagggacagtgcaatg
cttgtcctcagaaccaaacccaagttttgggagaatttaacaagtccgctgtttggaact
ctctctcctccttcagagacatctgagcccagtgtcctggaaacctgtgccctgatcatg
aagataatatgtttggagatatactatgtagttaagggctcgttagaccagtcattaaaa
gatacactcaagaagttctccagtgagaaacgctttgcctactggtcagggtacgtcaag
tctttggcagtttacatggctgacacagagggcagcagttgcacgtccctgctagagtat
cagatgctggtctccgcctggaggatacttctcatcattgctgccagtcacgcagacgtc
atgcacttgactgacatggcagtgcggcgccagctgtttcttgatgtgcttgatgggacc
aaagcattactccttgtggcagcatctgtgaactgcctccggctgggctccatgatgtgc
accctgctgcttatcctcctacgccagtggaagagagagctgggtgctgtggagaaaatc
cttgggcccttgacagagatcctggaaggggtgcttcaggcagaccagcagctcatggaa
aagaccaaggccaaggtgttctctgcattcatcacagtgttacagatgaaggagctgcga
gtcggtgatatcccccagtactcccagctggtgctgaacgtctgtgagactctccaagaa
gaggtgattgcactctttgatcagacccgccacagcctggcatccgacagcgctgccgag
gacaaggacagcatggagacagatgactgccctcggccccggcacaaggaccagcgtgat
ggggtgtgtgtcctgggactgcatctggctaaggagctctgtgaggtggatgaggatggg
gactcatggttgcaggtgacccgaaggctccccattctgcccacgctgctcaccacgctg
gaggtgagcctccgcatgaagcagaacctgcattttactgaggctgcgctgcacctgctc
ctcaccctggctcgaacccagcaaggagccacagcagtggctggagctggcatcacccag
agcatctgtttgcccctcttgagtgtataccagcttagcagcaatggcacaggacagaca
cctagcacctctcgaaagtccctggatgccccatcctggccaggagtctaccgcctgtcc
atgtccttaatggagcgattgctcaagactctacgctacaatttcctgacggaggctcta
gactttgtgggtgtccatcaagaacggaccttgcagtgtctcaatgccgtgaagacagtg
cagagtctagcctgcctggaggaagcagatcacaccgtgggcttcatcctacaactgtcc
cacttcaggaaggagtggcacttccatctgcctcagctcatgcgtgatgttcaggtgaac
ctgggttacttgtgccaggcctgtacctccctcctgcacagccgcaagatgctgcagcac
tacctacagaacaaaaatggtgatggcctcccttcagctgtcactccccgagctcagcgg
ccatccaccaccaccaccaccaccaccaccaccaccgctctggctaccccagctggctgc
tcctccaagcagcctactgctgacactgaggcctcagaacagcgagccttacacacagtc
cagtatgggcttctcaagattctcagcaggaccctggcagccctgcgccacttcactccg
gatgtctgccagatcctgttggaccagtccctggatcttgctgagtacaacttcctcttt
gccctaagttttaccactcccacctttgactctgaagtggctccctccttcggaaccctc
ttggccacagtgaacgtggccctcaacatgcttggagagctggacaagaaaaaggaatcc
ctcacccaggctgtgggactcagcacacaagcagaagggacccgaacattaaagtccctc
ctgatgttcaccatggagaactgcttctacctgctcatctcccaagcagtacgctacctc
agggacccggctgtgcacccccgggacaagcagcggatgaagcaggagctgagctcggag
ctgagcacgttgctttccagcctctcacgatacttcagaaggggggcccccagctcccct
gctgctggagtcctgccctcaccacagggcaaggccacctctctctccaaagccagccca
gaatctcaggagcctctgatccaacttgtgcaagcctttgtccggcacgtgcagagatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (9)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (36)   
   RefSeq(nuc) (8)   
   GenBank (14)   
   EMBL (14)   
Protein domain (3)   
   Pfam (3)   
All databases (71)   

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