KEGG   Mus musculus (house mouse): 230257
Entry
230257            CDS       T01002                                 
Symbol
Ptbp3, 5830471K22Rik, Rod1
Name
(RefSeq) polypyrimidine tract binding protein 3
  KO
K17844  polypyrimidine tract-binding protein 3
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    230257 (Ptbp3)
Spliceosome [BR:mmu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    230257 (Ptbp3)
SSDB
Motif
Pfam: RRM_5 RRM_1 RRM_8 RRM_occluded
Other DBs
NCBI-GeneID: 230257
NCBI-ProteinID: NP_835458
MGI: 1923334
Ensembl: ENSMUSG00000028382
UniProt: Q8BHD7
Position
4:complement(59471868..59549288)
AA seq 523 aa
MNSSTSAGVYANGNDNKKFKGDRPPCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLL
MLKGKSQAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTDNLPNQARAQA
ALQAVSAVQSGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVL
KIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYNACCTLRIDFSKLTSLNVKYNNDK
SRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFAPAIAFPQAAGLSVPAVP
GALGPLTLTSSAVSGRMAIPGASGMPGNSVLLVTNLNPDFITPHGLFILFGVYGDVHRVK
IMFNKKENALVQMADASQAQLAMNHLSGQRLYGKVLRATLSKHQAVQLPREGQEDQGLTK
DFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQ
KDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKSTI
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgaacagctcgacttctgcaggtgtgtatgctaatgggaatgacaacaagaaatttaaa
ggagatagacctccctgttcgccttcccgtgttctccatcttcgaaaaattccatgtgat
gtcaccgaagcagaggtcatatcattaggtctaccatttggcaaagtaactaatcttttg
atgttgaaaggaaaaagccaggcctttttagaaatggcttctgaagaagctgctgttact
atgataaattattacactcctgttactcctcatcttcgaagtcagcctgtttatatccag
tattccaatcaccgagaacttaagactgacaatctgcctaatcaggctagagcccaagct
gcactgcaggctgtcagtgcagtccagtcaggaaacttgtcccttcctggagctactgca
aatgaaggcacattgctacctgggcagagccctgtgctccggataattattgaaaaccta
ttttaccctgtcactctggaagttctccatcagatattttctaaatttggcacggtgttg
aagattatcacctttacaaagaataatcagtttcaagccttgcttcagtatgccgaccca
gtgaatgcgcagtatgccaaaatggctctggatggccagaatatctacaatgcgtgctgc
actctccgtattgacttctccaagctcaccagccttaatgtgaaatacaataatgacaaa
agcagagacttcactcgcttagaccttcctactggtgacggccagccatctcttgaacct
cctatggctgctgcttttggtgcaccgggtataatgtcctctccatatgcaggggctgct
ggctttgccccagccatcgcatttcctcaagcagcaggtctgtctgtcccagctgttccc
ggagcccttggtcctctcacacttacctcctctgctgtcagtggaaggatggccattcct
ggggcaagtggtatgcctgggaattctgttctgctggtcaccaacctcaatcctgacttt
atcacaccacatgggctttttatcctatttggagtgtatggtgatgtacatcgagtgaag
attatgtttaacaagaaagaaaacgccttggtgcagatggcggatgcgagtcaagcccag
ctagcaatgaaccacctaagtggtcagaggctctatggaaaagtacttcgggctacactg
tccaaacatcaagccgtccagctccctagagagggacaggaagaccaaggtctgaccaag
gacttcagcaatagtcccctgcatcgctttaaaaagcccggctcaaagaatttccaaaat
atcttccctccatcagccacacttcatctttccaacattcctccttctgtcacaatggat
gacctgaagaacctgttcacagaagctggatgctcagtgaaggcttttaagttcttccag
aaagaccgtaagatggctctcattcagttgggatctgtggaagaagcaatccaggctctt
attgagcttcacaatcatgaccttggagagaatcaccacctcagagtttccttctcaaaa
tccaccatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (12)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (10)   
DNA sequence (36)   
   RefSeq(nuc) (10)   
   GenBank (13)   
   EMBL (13)   
Protein domain (4)   
   Pfam (4)   
All databases (67)   

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