KEGG   Mus musculus (house mouse): 230622
Entry
230622            CDS       T01002                                 
Symbol
Skint6
Name
(RefSeq) selection and upkeep of intraepithelial T cells 6
Organism
mmu  Mus musculus (house mouse)
SSDB
Motif
Pfam: V-set Ig_3 DUF1539 I-set ig C2-set_2 Ig_2
Other DBs
NCBI-GeneID: 230622
NCBI-ProteinID: NP_001096669
MGI: 3649262
Ensembl: ENSMUSG00000087194
UniProt: A7XUZ6
Position
4:complement(112661813..113144170)
AA seq 1240 aa
MGTIGVPLTAHCVVLFLLQMVALSTEQFTVNGLESPVLVPLGGNLELSCQLSPPQQAKHM
EIRWFKNRYSEPVYLYRNGKDLNEAIVYKYVERTELLKDDIGKGKVTLRIFKVTSVDSGS
YHCFFKDDKFYEEHIIEVKVTATSSDIQILMHPPNSTGVRLECHSGGWFPQPHMEWRDSK
GEYIPATSKSHSQDENEFFNMTMDLFIKSNSYWSAACYIQNFVTHQEESISFVLPGTKVL
LLKNIQSIFQSSSVDLEKKDMLLKSIKSRFQSSSVDPEKKERLLKIIQSRIESSSVDQET
KALLLESIQSSIENSTVDLETKVWLLESIKSSIQNSSVDPETKELLLERIKSSIENSTVD
LGTKEWLLESIQSSIQSSSVDLGTKKMLLKIIQSSIQSFSVYIGTKEWLLERVQSSIQSS
SVDLGTKELLLEIIQSSIEGYSVELGIEELLSKIILSSIQSSRVDLGIKELLVKICQSSI
QSTSVILETKEWLVKIFQSNIQSSSMDLETKVWLVKFFQSSIQSSSMDLGTIKWLVKNVQ
SNIQSSRVDLETKRMLLEIIQSSIQNSSVHRGTKKMLLKVIQSSIQSFSVDLETKEWLLK
IIQSSIQSSSVDIGTKSMLLKKIGLILRSSIVNPGTELLFQIIQSDLQSSSVNTETREML
FEITQPTVQSSSVNSVTEELLEENYQLLLQSSSVNLEAENILNDTTQRILQLSSVNQGRE
KLLLDRIQQILQSSSVNPETKCWLLKRIQFILENPSVHQEKKDLLLERIHLILQSSSVQK
ETKSLLLGSIQSILHSFSVQKETKYLLLEKIQLILQNSSVHQETKDLLLKIIQLILQYSS
VHEATSKLLLERIQLILQSSSVQKETKDLLLNRIFSILQNSCVDQGVKYFLLNIIHPILQ
KTSVHQETKSMLLDRIELILQSSSMQQETKNHLLDQIEQILQDTTVHQETKDLLLNRIEL
ILQNSSVQQETKELLMDKIDSILRYTWVHQETKDLLLNRIELILQSSSVQEETKNFLCNI
IASILQSTSMHQEKKKLLLGRIELILQSSSVQQETKKLLLKIVQSSSPSSSVRLESCNKR
NPFWKKHALDLGISVFAIIVVTLIRHLNQREADQHFELDTLWSKDTSVILCVLIMFNNRL
KALIYFRLYGYSPPGKTYKYIVNYILRFSQPLFFIVYSAIILVMHLQIQNTDSLFSLYNS
WMVEMIMVLGLLLAIFNVKNIATALLHLGRTTLRLFRIKD
NT seq 3723 nt   +upstreamnt  +downstreamnt
atgggaactataggagtacctcttactgcacactgtgttgttttgtttctcctccagatg
gtagcactgagtacagaacaattcactgtgaatggcttagagagtccagtcttggttcca
ttgggtggaaatctagaactcagttgtcagttgtctccaccacaacaagcaaagcacatg
gaaattcgctggttcaagaatcgctattcagagccagtatacctgtatagaaatggtaaa
gacctgaatgaagcaattgtctacaagtatgtagagagaactgaactcctgaaagatgac
atcgggaaagggaaagtaaccctcaggatctttaaagtaactagtgttgatagtgggtcc
taccactgcttcttcaaagatgacaagttctatgaagagcatatcatagaagtcaaggtc
acagctacaagctcagacatacagattcttatgcatcccccaaacagcacaggtgtgagg
ttggagtgtcattcaggaggttggttcccacagcctcacatggaatggagagacagcaaa
ggagagtacattccagctacatcaaaatcccattcacaggatgaaaatgaatttttcaac
atgacaatggacctttttattaaatccaactcctactggagtgctgcctgctacattcaa
aactttgtaactcaccaagaagaaagcataagctttgtcctaccagggacaaaagtgttg
ctgttgaaaaatattcaatcaatttttcaaagttccagtgtggatctagagaaaaaagat
atgcttttgaaaagtattaaatcaagatttcaaagttccagtgtggatccagagaaaaaa
gagaggctgttgaaaattattcaatcaaggattgaaagttccagtgtcgatcaagagaca
aaggcgttgctgttggaaagtattcagtcgagtattgaaaattccactgtggatctagaa
acaaaagtgtggcttttggaaagcatcaaatcaagtattcaaaattccagtgtggatcca
gagacaaaagaattgctgttggaaagaattaagtcaagtatagaaaattccactgtggat
ctagggacaaaagagtggctgttggaaagcatccaatcaagtattcaaagttccagtgtg
gatctagggacaaaaaagatgctgttgaaaattattcaatcaagtattcaaagtttcagt
gtttatataggaacaaaagagtggctgttggaaagggttcaatcaagtattcaaagttcc
agtgtggatctagggacgaaagagttgctgttggaaattattcaatcaagtattgaaggt
tacagtgtggagctagggattgaagagttgctgtcaaaaattattctatcaagtatccaa
agttccagggtggatctagggataaaagagttgctggtgaaaatttgtcaatcaagtatt
caaagtaccagtgtgattctagagactaaagaatggctggtgaaaatttttcaatcaaat
attcaaagttccagtatggatctagagacaaaagtgtggctggtgaaattttttcaatca
agtattcaaagttccagtatggatctagggacaataaaatggctggtgaaaaatgttcaa
tcaaatattcaaagttccagagtggatctagagacaaaaaggatgctgttggaaattatt
caatcaagtattcaaaattccagtgtgcatagagggaccaaaaaaatgctgctgaaagtt
attcaatcaagtattcaaagtttcagtgtggatctagagacaaaggagtggctgttgaaa
attattcaatcaagtattcaaagttccagtgtggatatagggaccaaatccatgctgttg
aaaaaaataggattgattttgaggagttccattgtgaatccagggacagagttgctgttt
caaataattcaatcagatcttcaaagttccagtgtgaatacagagacaagagagatgctg
tttgaaataactcaaccaactgttcaaagttccagtgtgaattcagtgacagaagagttg
ctggaagaaaattatcaactgcttcttcaaagttccagtgtgaatttagaagcagaaaat
atactgaatgatacaactcaaaggattcttcaactttccagtgtgaatcaaggaagagaa
aagttgctcttggacagaattcagcagattcttcaaagttcaagtgtgaatccagaaaca
aaatgttggttgttgaaaagaattcagttcattcttgaaaatcccagtgtgcatcaagag
aaaaaagatttgctcttggaaagaattcacttgattcttcaaagttccagtgtgcaaaaa
gagacaaaatctttgctgttgggaagtattcagtcgatccttcatagtttcagtgtgcaa
aaagagacaaaatatttgttgttggaaaaaattcagttgattcttcaaaattccagtgta
catcaagaaaccaaagatttgttgttgaaaataattcagttgattcttcaatattccagt
gtgcatgaagctacaagtaaattactcttggaaagaattcagttgattcttcaaagttcc
agtgtgcaaaaagaaacaaaagatttgttgttgaatagaattttctcgatccttcaaaat
tcctgtgtggatcaaggggtaaaatatttcctgttgaatataattcatccgattcttcaa
aaaaccagcgtgcatcaagagacaaaaagtatgctgttggacagaattgagttgattctt
caaagttccagtatgcaacaagagacaaaaaatcacctgttggatcaaattgagcagatt
cttcaagatacaacagtgcatcaagagacaaaagatttgctgttgaacagaattgagttg
attcttcaaaattccagtgtgcaacaagagactaaagaattgctgatggacaaaattgat
tcgattcttcgatatacctgggtgcatcaagagacaaaagatttgctgttgaacagaatt
gagctgattcttcaaagttccagtgtgcaagaagagacaaaaaatttcctgtgtaatata
attgcgtcgattcttcaaagcaccagcatgcatcaagagaaaaagaaattgctgttgggc
agaattgagttgattcttcaaagttccagtgtgcaacaagagacaaaaaagttgctgttg
aaaattgttcaatcaagttctccaagttcctctgtgcgtctagagtcctgcaataagaga
aatcctttttggaaaaagcatgcattggacctcggaatttcagtgttcgcaattatagta
gtcactctcattaggcatttaaatcaaagagaggcagaccaacattttgaactggatact
ttgtggtcaaaagatactagtgtgatcctgtgtgtgctgatcatgtttaacaacaggctc
aaggcattgatttacttcagactgtatggatattcacctccaggtaaaacatataaatac
atagtaaactacatattaagattctctcaacccctgtttttcatagtctactctgcaata
atccttgttatgcatctgcaaatacagaacacagattcattattttccttgtacaatagc
tggatggtagaaatgataatggttctaggattactactcgcaattttcaatgttaaaaac
attgcaactgcattattacacttaggccgtacaactctacgactattccggattaaagac
tag

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