KEGG   Mus musculus (house mouse): 231464
Entry
231464            CDS       T01002                                 
Symbol
Cnot6l, 4932442K20Rik
Name
(RefSeq) CCR4-NOT transcription complex, subunit 6-like
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    231464 (Cnot6l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    231464 (Cnot6l)
Enzymes [BR:mmu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     231464 (Cnot6l)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     231464 (Cnot6l)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     231464 (Cnot6l)
SSDB
Motif
Pfam: Exo_endo_phos LRR_8 LRR_4 LRR_1
Other DBs
NCBI-GeneID: 231464
NCBI-ProteinID: NP_849185
MGI: 2443154
Ensembl: ENSMUSG00000034724
UniProt: Q8VEG6
Position
5:complement(96218192..96312044)
AA seq 555 aa
MRLIGMPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTA
LHLNDNNLARIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNDNYLRVLPYE
LGRLFQLQTLGLTGNPLSQDIMSLYQDPDGTRKLLNFMLDNLAVHPEQLPPRPWITLKER
DQILPSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNWDADIISLQE
VETEQYFTLFLPALKDRGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGTGMKPIHAADKQLLIVANAH
MHWDPEYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVV
EYLSNGGVADNHKDFKELRYNECLMNFSCSGKNGSSEGRITHGFQLKSAYENNLMPYTNY
TFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHP
PLLPLVNGVHLPNRR
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgagactaatagggatgccaaaggaaaaatatgatcctccagatcctcgcagaatttac
accatcatgtccgcagaggaggtagccaatgggaaaaaatctcactgggcagagttagag
atctcgggtagagtgcggagcttaagtacatcactctggtcattaacacacttgacagca
ctgcacctaaatgacaataaccttgctcgcattccacctgatattgccaagcttcataat
ctggtttacctggatctgtcatccaataaactcagaagtttaccagcagaactaggaaac
atggtgtctctcagggaattgcttttaaatgacaattatttacgggtgttgccttatgaa
cttggccggctcttccagctacaaactctaggtttaacaggcaatcctttatcacaggat
attatgagcttataccaggacccagatggaacccgaaagctactgaacttcatgcttgac
aatcttgcagttcatccagagcagcttcctccgaggccatggattacattaaaagaacga
gaccaaattctgccatcagcatcattcacggttatgtgttacaatgtgttatgtgataaa
tatgctaccaggcagctatatggctattgtccgtcctgggcattaaactgggaatacagg
aaaaagggaattatggaagaaattgttaactgggacgcagatatcattagtcttcaggaa
gtggaaacagagcaatactttactctctttctgccagcattgaaggatcgtggatatgat
ggatttttttctccaaagtcacgtgccaaaatcatgtctgagcaggaaagaaagcatgtg
gatggttgtgcaatattcttcaaaacagaaaaatttacattggtgcagaagcatacagtg
gaattcaaccaggtagcaatggcaaattcagatggatccgaagcaatgctaaacagagta
atgacgaaagataacattggcgttgctgtggtgttagaggtccacaaggagctttttgga
acaggtatgaagcctattcatgctgcagacaaacagctgcttatagtggcaaatgcccac
atgcattgggacccagagtattctgatgtgaaacttattcagaccatgatgtttgtctca
gaggttaaaaacattctggagaaagcctcaagtaggcctggcagcccaactgcagatccc
aattccatcccgctggtgctatgtgcagatcttaactcattgccagattcaggtgttgtg
gaatatttaagcaacggtggagtagctgacaaccataaagacttcaaggaactaaggtac
aatgagtgtcttatgaacttcagctgtagtggaaagaatggaagctcagaagggagaatc
acacatggcttccaacttaagagcgcctatgaaaataacttgatgccttataccaattac
acctttgatttcaaaggtgtgattgactacattttctattccaagactcatatgaacgtg
cttggtgtcctggggcctttagatcctcaatggctggttgagaacaacatcactgggtgt
ccacaccctcacatcccttcagaccacttctcactgttaacacaacttgaactccaccct
ccactcctgcctcttgtcaatggtgttcacttgcctaatcggaggtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (11)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (35)   
   RefSeq(nuc) (9)   
   GenBank (13)   
   EMBL (13)   
Protein domain (4)   
   Pfam (4)   
All databases (69)   

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