KEGG   Mus musculus (house mouse): 233977
Entry
233977            CDS       T01002                                 
Symbol
Ppfia1, C030014K08Rik, LIP.1, LIP1
Name
(RefSeq) protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
  KO
K26226  liprin-alpha
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    233977 (Ppfia1)
Membrane trafficking [BR:mmu04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    233977 (Ppfia1)
SSDB
Motif
Pfam: SAM_1 SAM_2
Other DBs
NCBI-GeneID: 233977
NCBI-ProteinID: NP_001028491
MGI: 1924750
Ensembl: ENSMUSG00000037519
UniProt: B2RXW8
Position
7:complement(144030492..144107497)
AA seq 1241 aa
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQET
LALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERCSLLEEELGATHKELMILKEQNNQKKTLTDGLLDGNHEQESAPSTNGKRSSD
GSLSHEDLAKVLELQEVIDRQAREQSQMKERLASLSSHAAELEEDLDTARKDLIKSEEMN
TKLQREVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIANKDSMHRQTE
DKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKAEERHGNIEERLRQMEA
QLEEKNQELQRARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKERMAALEDKNSLLR
EVENAKKQLEETQHDKDQLVVTIEALKAELEQMRLRGPSLHHGRPHLGSVPDFRFSVADG
HVDAYSTSAVLRRPQKGRLAALRDEPSKVQTLNEQDWERAQQASVLANVAQAFESDVDVS
DGEDDRDTLLSSVDLLSPSGQADAQTLAMMLQEQLDAINKEIRLIQEEKENTEQRAEEIE
SRVGSGSLDNLGRFRSMSSIPPYPASSLAGSSPPGSGRSTPRRVPHSPAREVDRLGVMTL
PSDLRKHRRQLPASREEVRDDKTTIKCETSPPSSPRPLRLDRMHKGAPHTVSHEDIRDLR
NSTGSQDGPVSNPSSSNSSQDSLHKAPKKKGIKSSIGRLFGKKEKGRPGPLGKESPGQVG
VSETENSSQDALGLSKLGGQAEKNRKLQKKHELLEEARRQGLPFAQWDGPTVVVWLELWV
GMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPP
TSRTTTGNVWLTHEEMETLTATPQTEDEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQYR
SYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQCGIMCLRRLNYDRKELERKREES
QNETRDVLVWSNDRVIRWILSIGLKEYANNLIESGVHGALLALDETFDFSALALLLQIPT
QNTQARAVLEREFNNLLITGTDRRFDEDDDKSFRRAPSWRKKFRPKDIRGLASGSAETLP
ANFRVTSSMSSPSMQPKKVQMDGSVSGAQRLDSATVRTYSC
NT seq 3726 nt   +upstreamnt  +downstreamnt
atgatgtgcgaggtgatgccgaccattagtgaagcagaaggccctccaggaggaggtggg
agccatgggtcaggctccccttcacagccagatgctgattcgcattttgagcagctcatg
gtttccatgttggaagaacgggaccgccttctggacacactaagagagacacaagaaaca
ctggcattaacccaggggaagttgcatgaagttggtcatgaaagagattctttgcagagg
cagctcaatactgcacttccacaggagtttgctgcgctcacgaaggaactcaatgtgtgc
agggagcagcttctagagagagaggaagaaatcgccgagctgaaggcagagaggaacaac
actaggctgctgttggagcacctagagtgccttgtctccaggcatgagcgctctctccgg
atgacagtggtaaagaggcaggcacagtcacctgcaggcgtgtccagtgaggtggaagtg
ctgaaagccctgaagtcactgtttgaacaccacaaagccttggatgagaaggtacgagag
cgactacgagtggctctggagaggtgcagcttgttagaagaggagctgggtgccacccac
aaagagctaatgattcttaaagaacagaataatcagaagaaaacactaacagatggactg
cttgacggaaaccatgaacaggaaagtgcaccaagcaccaacggcaagagatcttctgat
ggctccttgagtcatgaggatcttgccaaagtgctggagctgcaggaagtcatagacagg
caggcgagagagcagagccagatgaaggagcgcctggcctccctgtccagtcatgcagca
gaactagaagaggatctggacacagctagaaaagacctcatcaagtctgaagagatgaat
acgaaactgcagcgagaagtccgtgaagcaatggcccagaaggaggatatggaagagaga
atcaccacccttgagaaacgctacctcgccgcacagcgtgaagccacgtctgtgcatgac
ctcaatgacaaacttgaaaatgaaattgcaaataaagactccatgcaccgacagacagaa
gacaagaaccgccagttgcaagagcgtctggagttggccgagcagaagctgcagcagacc
ctgcgcaaagctgagacgctgccagaggtggaggctgagctggcccagagggtggctgca
ctctccaaggctgaggagagacatggcaatattgaagagaggctgcggcagatggaggca
cagctggaggagaaaaatcaggagctgcagcgggcaaggcagagagaaaagatgaacgag
gaacataataagcgcctgtctgacactgtggataagttgctctcagaatccaatgagagg
ctgcagctgcatctgaaggagagaatggcggcgctggaggacaagaattctctactaagg
gaagttgaaaatgcaaagaagcaactagaagagacccagcatgataaggaccaacttgtc
gtgactattgaagccctgaaggctgagctggagcagatgagactgagaggtccttcactc
catcatggccgaccccatttgggcagcgtcccggacttcaggttctctgtggcagacgga
catgtggatgcttacagcaccagtgcagtgttgcggcgcccccagaagggccgactggca
gcgctgcgggatgagccctccaaggtgcagaccctcaatgagcaggactgggaacgggcc
caacaagccagcgtcttggcaaatgtggcacaggcatttgagagtgatgtcgatgtgtct
gatggtgaagatgaccgagatacactgctcagctcagttgatctgctgtcacccagtgga
caggctgatgcccagacactggccatgatgcttcaggaacagctggatgctatcaacaaa
gagatcaggctgatacaagaagagaaggagaatacagaacagcgggcagaggagatcgag
agcagagtgggcagtggaagcttggacaatcttggtcgttttagatcaatgagctccatt
cccccctaccctgcttcctcgcttgctggctcctctcctccaggcagtggtcggtccaca
ccaagaagggtccctcacagtcctgcccgggaggtggacaggctgggtgtcatgactctg
cctagtgacttaaggaagcaccggagacagttgccagcttccagagaagaggtacgagac
gacaagacgacgataaaatgtgaaacctctcccccctcctccccgaggcccctgcgctta
gacaggatgcacaagggcgcaccgcacacggtcagccatgaggacatcagggacctgagg
aactccacaggctcccaggatggtcccgtgagcaaccctagcagcagtaatagtagccag
gactccctccacaaagccccaaagaagaagggtatcaaatcctccattggccgcttgttt
gggaagaaggaaaagggccggcctggtccactgggcaaggagtcaccagggcaagttggt
gtttcagagacagaaaattcatctcaagatgccctgggactcagcaaactgggaggacaa
gctgagaaaaaccgtaaacttcagaaaaagcacgagctgctggaggaggcccgcaggcaa
ggcttgccttttgcacagtgggatgggcccacagtggtagtgtggttagagctctgggtt
gggatgcctgcctggtatgtggctgcttgccgagcaaatgtcaagagtggtgccatcatg
tcagccctgtcagacactgagatccagcgggagattggcatcagcaaccccctgcatagg
ctgaagctgcggctggccatccaagagataatgtcactgactagcccttctgctccaccc
acatccaggacgaccacaggaaatgtctggttgacacatgaagagatggaaacgcttaca
gccacgccacaaacggaagacgaggagggaagctgggctcagactctagcatatggggac
atgaaccacgagtggatcggcaatgagtggctgcccagcctgggcctgccgcagtaccgc
agctactttatggagtgccttgtagatgcccggatgctggaccacttgaccaagaaagac
ttgcgagggcagctgaagatggtcgacagcttccacagaaacagtttccagtgtggaatt
atgtgcctgagaaggctaaattatgaccgaaaagaactggaaagaaaaagagaagagagt
cagaatgagacaagagatgtgcttgtgtggagcaatgaccgggtgattcgctggatcctg
tcgattggccttaaagagtatgccaacaacctaatagagagcggtgttcacggtgcactt
ctggctttggacgagactttcgatttcagtgccctggcactcttgttacagattccaaca
cagaatacgcaggctcgagctgtcttggaaagagaattcaacaaccttttgatcacgggg
actgatcggaggtttgatgaggatgatgacaaaagcttcaggagggcgccttcctggagg
aagaagttcagaccaaaggacattcgtggcttggcctctggctctgcagagacgttgcct
gccaacttccgggtcacctcctcaatgtcatctccctctatgcagccaaagaaggttcag
atggacggtagtgtgtccggagcacagaggttggactctgccacagtcaggacttactcc
tgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (29)   
   UniProt (1)   
   RefSeq(pep) (28)   
DNA sequence (50)   
   RefSeq(nuc) (28)   
   GenBank (11)   
   EMBL (11)   
Protein domain (2)   
   Pfam (2)   
All databases (98)   

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