KEGG   Mus musculus (house mouse): 234311
Entry
234311            CDS       T01002                                 
Symbol
Ddx60, 9830118M07
Name
(RefSeq) DExD/H box helicase 60
  KO
K20103  ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    234311 (Ddx60)
Enzymes [BR:mmu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     234311 (Ddx60)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     234311 (Ddx60)
SSDB
Motif
Pfam: DEAD ResIII Helicase_C
Other DBs
NCBI-GeneID: 234311
NCBI-ProteinID: NP_001280712
MGI: 2384570
Ensembl: ENSMUSG00000037921
UniProt: G3X9F7
Position
8:62381155..62491278
AA seq 1710 aa
MEKKYTGFLKIMSHLILETMSKADYSSLFNDFVESEFFLIDGDSLLITCACERSLKPGQS
LHFFYLVERYLLDVISKGGQFAIVFFKDAEYAYFNVPELLTLRTALILHLQKNTTVEVWT
KFSNCLSEEWNICLGQSCPYFLILADEGLNDLQTHLFNFVVIQAWAAKVNIVLFSGQTSD
ILRLYAYFMQSSHGMQMFFKENKRMIMIVYKSLIQQLEKYRDMALAHLFGDLKFNDMEEK
VCETVSLLKQLWPEGSDIRCVFCVTSCSLFLEMYHCYLESREKGASEEMSKVKQKTDNCL
TLKDMEDFCKLHCLSVALLLHVPLSQRARSRFITANWIQDLKTVLKMKKWCEYFILSNLD
MFESWSLNLLHLSDLSDEPLLRNIAFYYENENKEGLDLNVGDAIMNEYVHLWDTVSKLVR
KFDVGKPIPLRTTKVHFLEKTPSPIKESSQEMMPNLGFIPMSCNLVDEFTGDILKDLPFL
MSDDPIVTSLVKHKEFDELVHWHSHRPLSDDYDRTKVNSGDRRDPNHLKRLQKYHSFQRF
YGESLESVTSKTITTQGPKPKKDCIKSKSTKAHETKAEIIKRENKKRLIAEEEQKEEQKW
NALSFSIEEEMRKNVDSGMKKLEEFLKSCKSRSVKAQVERVGLQACLKAWKEHCQAEGET
TKDLSIAVNMMKRIHSLLDKHSELLQEADQKLIARCLKYLGFCELAVSLYPTQDASDGIK
MKKKNKYSVGIGPARFQLQYMGHYLIREERKDPDPRVQDFIPDTWQRELLDVVDNYESAV
IVAPTSSGKTYASYYCMEKVLKESDEGVVVYVAPTKALVNQVAATVEYRYAKNMPAGESL
CGVFTRDYRHDALNCQVLITVPACFEILLLAPHRQNWVKRIRYVIFDEVHCLGGEIGAEI
WEHLLVMIRCPFLALSATISNPQHLTEWLQSVKRYWKQVDSTMEERTVSKRTGTSRGSYY
KDQAQARQSYKVRLVLYGERYNDLEKYLCSVRQGDVCFDHFHPCAALTIDHIEKYGFPSD
LALSPRESIQLYDTMCQVWKSWPQAQSLCPENFTQFKNKIVIKKLDARKYEESLKEEFTN
WVKNGNEEEARMVLKKLSPDYHEHSGRMLDFFPCLVEKLRKMEKLPALFFLFKLNIVEEC
AENAFEFLEKKQEEKRPPKADKEARTTANKLRKVKKSLEKQKTVDEKGQKSSRRLDESVM
HETEHNYLLQTLEKNLEIPKDCTYANQKAIDDQLLQRVFHRVRFERKGETLKRLAERGIG
YHHSSMSAKEKQLVEILFRKGFIRVVTATGTLALGINMPCKSVVFAQNSVYLDALNYRQM
SGRAGRRGQDLLGDVYFFDIPLPKIGKLIKSKVPELRGQFPLSISLILRLMLLASKADDL
EDGKAKALSVLKHSLLSFKQPRAIDMLKLYFLYSLQFLVKEGHIDQEGNPTGFAGLVSHL
HYHEPSNLVFVSFLVKGLFHKLCQPTREGPKRFSEDVMEKLVLVLANLFGRRYIPAKFYE
VNSKFYQSKVFLDDLPEDFSHALLEYNTQVTEDFASFLLMVSRLADMKQEYQLSLSKIEF
TGKECEDSPLVSHLMNCKEGRVAVSPFVCLSGNFDVDLLSPGVPNHVILHTLGINHTQAP
VLWPYALDSQGRKIPLNAYALDFYKHGSLIGLVQDNRIHPGEAYSLLKDFNLIIKSISVS
LRELCENEEDNVVLAFEQLSTSFQEKFELV
NT seq 5133 nt   +upstreamnt  +downstreamnt
atggaaaaaaaatacacaggttttttaaaaataatgtcacatttaatcttggaaactatg
tcaaaggctgactactccagcttattcaatgattttgttgaatctgagttctttctgatt
gatggcgactccttgctcatcacgtgtgcgtgtgagaggtcacttaagccaggacagagt
ctccacttcttctacctggttgagcgctacctgttggatgttattagcaaaggagggcaa
tttgccatagttttcttcaaggatgctgagtatgcatacttcaatgtccccgaacttctg
acactgagaactgctttaattctgcatcttcagaagaataccactgttgaagtttggact
aagttttctaactgcttgtcagaagagtggaatatttgcttgggtcagagttgcccatat
ttcttgatactggctgatgaaggcctgaacgacctgcagacacatcttttcaactttgta
gttattcaggcctgggcagcaaaggtcaatattgtgctcttctcaggacagacatctgac
atccttcgtctttatgcatactttatgcaaagctctcatggaatgcagatgttcttcaag
gagaataagagaatgatcatgattgtttacaaaagcctgattcaacagctggaaaaatac
agagatatggctttagcacatctgttcggagatttaaaattcaatgatatggaagagaag
gtatgtgaaactgtatctctgctgaaacaactctggccagaaggatctgacatccgatgt
gtcttttgtgtcacctcatgttctctcttcttggaaatgtatcactgctacttagaaagc
agagagaaaggagcatctgaggagatgtccaaagtcaaacagaaaacagataattgctta
accctgaaggacatggaagacttttgtaagctacattgcctcagtgtggctcttttgctc
catgtacctctctctcagagagctcgctcaagattcatcactgctaattggattcaggac
ctcaagactgtcctaaaaatgaaaaagtggtgcgagtattttatcctaagtaatttggat
atgtttgaatcttggagtctgaatttacttcacctttctgacttaagtgatgagcctttg
ttgaggaatattgctttttactatgaaaatgaaaataaagaaggcctggatttgaatgtg
ggagatgccatcatgaacgagtatgtacatctctgggacactgtgtcaaagttggtcaga
aagtttgatgtgggaaaaccaattcctttgagaacaacaaaagttcattttcttgaaaag
acaccatcaccaatcaaagaaagttcccaggagatgatgccaaatttaggttttattcca
atgtcatgtaatttagttgatgaatttactggagacattttgaaagacttgcctttccta
atgagtgatgaccccattgttacgtcactggtaaagcataaggaatttgatgagcttgtg
cactggcactcccacagacctctcagtgatgattatgacaggacaaaggtgaattctgga
gacagaagagaccccaatcatcttaaaaggttgcagaagtatcatagttttcaacgattt
tatggggagtcattagaatcagtcacttcaaagaccatcacaactcaaggtcctaagcca
aagaaggattgtattaagtccaagagcacaaaggcacatgagaccaaggctgaaataatt
aaaagagaaaataagaagaggttaattgctgaggaagaacaaaaagaagagcaaaaatgg
aatgccctgtcattttctatcgaggaggaaatgagaaagaatgtagactcaggaatgaag
aaactggaagagtttttgaaatcatgtaaaagtcgctcagtaaaagctcaggttgaaaga
gttgggttacaggcttgcttgaaagcctggaaggaacattgccaggctgaaggtgaaacc
acgaaagacttaagcatagctgtcaatatgatgaagaggatccattccttgttggacaaa
cactctgaacttctgcaagaagcagatcagaaactcatagccagatgtcttaagtattta
gggttttgtgagctagcagtttctttatatccaactcaggatgcatcagatggcataaaa
atgaagaaaaagaataaatattcagttgggattgggccggctcggttccaactacaatat
atgggtcattatttaatacgagaagaaagaaaagacccagaccccagggtccaagatttt
attcctgacacatggcagcgagagctcctggatgtggtggataactatgagtctgcagta
attgttgccccaacatcatctggcaagacttatgcttcctactattgcatggaaaaggtg
ctgaaagagagcgatgaaggcgtggttgtgtatgttgcaccaacaaaggctcttgttaat
caagtggcagcaactgttgaatatcgttatgccaaaaatatgccagctggtgaatctctt
tgtggtgtttttaccagggattatcgccatgatgccctcaactgtcaggtgcttataact
gttcctgcctgctttgaaattctgctactagctcctcatcgccaaaattgggtgaagagg
atcagatatgttatatttgatgaggtccattgccttggtggagaaattggagcggaaatc
tgggagcatctccttgttatgatccgatgtccctttttggccctttcagctaccattagc
aaccctcagcatctcaccgagtggcttcagtcagtaaagcggtactggaagcaagtagac
agtaccatggaggaaagaactgtttccaaaagaactggtacctcccgtggcagctattac
aaagatcaagcgcaagccagacagtcctacaaagttagacttgtgctctatggagagaga
tacaatgacctagagaagtatttgtgttccgtgagacagggcgatgtttgctttgatcat
tttcacccctgcgctgcactaaccatagatcacattgaaaagtatggatttccttctgat
cttgccctttcaccccgagaaagcatacagctgtatgacactatgtgccaggtctggaag
agttggccccaggcccagagcctatgtccagagaacttcactcaatttaagaataaaata
gtcattaagaagttggatgctagaaaatatgaagagagcttaaaggaagaattcacgaat
tgggttaaaaatgggaacgaggaggaggccaggatggtgctgaagaaactgagccctgat
taccatgagcactcagggaggatgctggatttctttccatgtcttgttgagaagctaagg
aaaatggagaagttgcctgcactattctttttatttaagttaaatattgtagaagaatgt
gctgaaaatgctttcgaatttctggagaaaaaacaggaagaaaaaagacctcccaaagct
gacaaagaagctcgtaccacggctaacaaacttcggaaagttaaaaaatctctggagaaa
caaaagacagtagatgaaaagggccagaaatcttccagaagattggatgaaagcgttatg
catgaaacagaacacaattacctcctgcagactctggagaagaatctggagattcccaag
gactgcacatatgctaatcagaaggcaatagatgatcagttattgcagagggtgtttcac
cgggtgagattcgaacgtaaaggtgaaacactgaagaggttggcagaaaggggcattggc
taccaccacagttccatgagtgccaaagaaaagcagttggtcgaaattctcttcaggaaa
ggattcatcagggtggtgacagctactggaacactcgctttgggaatcaacatgccctgt
aaatctgtggtttttgcacaaaactcagtctatctggatgctttaaattacagacagatg
tctggtcgggctggaagacgagggcaagacctgttgggtgatgtctacttctttgatatt
ccactgcccaaaataggaaaactcataaaatccaaagttcctgaacttagaggacagttt
cccctcagtatttcactcatcctaagactcatgttgctggcttccaaggcggatgaccta
gaggatggcaaggcaaaggcactgtcagtgctgaagcattcattgttatccttcaaacaa
ccccgagccatagacatgttaaagctttacttcttatattctttgcagttcctggtgaaa
gagggacatatagatcaagaaggtaatcctacagggtttgctggccttgtctcccattta
cattaccacgaaccttctaatctcgtgtttgtcagttttcttgtaaaaggccttttccat
aaactttgtcagccaacaagggaaggcccaaaacgtttttctgaagatgtaatggaaaag
ctggttttggtattggcaaatctttttggaagaagatatatcccagccaagttctatgag
gttaactccaagttttatcaatcaaaggtgttccttgatgaccttcccgaggacttcagt
cacgccctgcttgagtacaatacgcaagtgacagaagacttcgcttcctttctgctaatg
gtatcccgattggctgatatgaaacaggagtatcaactctccttgtcaaaaatcgagttc
acaggtaaagaatgtgaagattcgccacttgtgtctcacttgatgaactgcaaggaagga
agggtggcggtttcaccctttgtttgtctgtctggaaactttgatgtggatttgcttagt
ccaggagttccaaatcatgtcattctacacacacttggtatcaatcacacacaagccccg
gtgctgtggccatacgcattggatagtcaaggaagaaaaattccacttaatgcctatgca
cttgatttctataagcatggatcccttattggattagtccaggacaataggatacatcca
ggggaagcttatagcctgttgaaagattttaatcttatcattaagtctatcagtgtctcc
ttgcgtgaactgtgtgaaaatgaagaagacaatgttgttttagcatttgaacaattgtct
acgtcttttcaagagaagtttgaattagtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (9)   
   UniProt (1)   
   RefSeq(pep) (8)   
DNA sequence (19)   
   RefSeq(nuc) (11)   
   GenBank (4)   
   EMBL (4)   
Protein domain (3)   
   Pfam (3)   
All databases (71)   

Download RDF
DBGET integrated database retrieval system