KEGG   Mus musculus (house mouse): 234395
Entry
234395            CDS       T01002                                 
Symbol
Ushbp1, 2210404N08Rik, 9430064H24, AIEBP, MCC2
Name
(RefSeq) USH1 protein network component harmonin binding protein 1
  KO
K21881  Usher syndrome type-1C protein-binding protein 1
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mmu03037]
    234395 (Ushbp1)
Cilium and associated proteins [BR:mmu03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   234395 (Ushbp1)
SSDB
Motif
Pfam: USHBP1_PDZ-bd Ribonuc_red_lgN CAGE1
Other DBs
NCBI-GeneID: 234395
NCBI-ProteinID: NP_852083
MGI: 1922920
Ensembl: ENSMUSG00000034911
UniProt: Q8R370
Position
8:complement(71836918..71848480)
AA seq 680 aa
MSARATRPRSRRGRHPLPGELDPVAESSEEVDANNGRFETKPELHQEYLGPGLQSPRNWI
KEGCDVGSHAVLSLSPEEQCEPEVEAHQVLQEAPLDSGPAEISVPSVYETLQCRLSSLEA
VVAALRHHSLSFPKSVEAEDRDQGAPGPFGDEKEDAGPGQQEAARLIERNAWLRLALCNR
EDELACTQASLQDAQAEKETLQRQVQELEDSLMQMEASPPTPILRAGRRNSNSSTSGAER
RPWVPQDSSMAHPFLQRLRSDSSTQSFGCLSTQHPAPETYLMEDQMGQLQGSIEKLKCFN
RLLLAVLQGYKGRCESLSIKLAKREAEATALRLALQYSEDCEEVYEVLLALKMAGLGTGV
GTTKGDLQAAEKEASRLLMKKEATMEVETPQPSSEGSGVDKPTPEELASQLHGYVQHLRE
RWALVKIPEELGPVTAPKATMPHAEATVQAILEIQPGPTLPHLEKSQIQQDLAATRDRLA
DLVLRLQLTQREKRGLELREAALRAQGPAHQLLLQQLRWERAHFAGDGSSGGSSEDPSSE
EEAGEDRQQHYQGPLALLDGQMGKVWDSENVSQELSASLARAIDLRAQLQSLRQQLEQVT
QKGRTRRVQSAELSRELCKAHSALALAFRGAHRKQEEQRLKLEQQVARLQAQQAEELAVL
TATARALGKPGAPQPAQTFL
NT seq 2043 nt   +upstreamnt  +downstreamnt
atgagtgcccgggccacacggccccgaagccgtcgagggaggcatcctctgcctggggag
ctagaccctgtagctgagagctcagaggaagtagatgccaacaatggacgcttcgagact
aaacctgagctgcatcaggaataccttggtcctggccttcagagcccaaggaactggatc
aaggagggttgtgatgtgggatcccatgcggttctatccttgagcccagaagaacagtgc
gagcctgaggtggaagcccaccaggtcctgcaagaagcccccctggatagtggccctgct
gagatatcagtacccagtgtgtatgagaccttgcagtgcaggctgagctcccttgaggca
gttgtagctgccttgcgccaccactcgctaagctttccaaagtcagtggaagcagaagac
agagaccagggggctccggggccctttggtgatgagaaagaagacgcaggacctggacag
caggaggctgctcgcctcatagagaggaacgcctggctgcggctagccctgtgcaaccgg
gaggatgagctggcatgcactcaggcttcactgcaggacgcccaggcagagaaggagact
ctgcagagacaggtacaggagctggaggattccctgatgcagatggaggcctccccacct
acccccatcctcagagcagggcgtagaaacagcaactccagtacttctggggcagaaagg
agaccctgggtacctcaggactcttccatggctcacccctttctccaacgcctccggagt
gactccagcacccagagctttgggtgcctttccacacagcatccagccccagagacgtac
ctcatggaagaccagatggggcagctccaggggagcattgagaagttgaagtgcttcaac
cgtcttcttctggctgtgctccagggctacaagggccgttgtgagagcctcagcattaag
ctggccaagcgggaagccgaggccacagccctgcgcctggctctgcagtatagtgaggac
tgtgaggaggtgtatgaggtgctgctagctctgaagatggctggcctaggaactggagtt
ggaactaccaagggtgacctgcaggctgctgagaaggaggcctctaggctgctgatgaag
aaggaagcaaccatggaggtagagacaccccagcccagctcagagggcagtggtgtggac
aagcctacaccagaggaactggcctctcagctccatggctatgtccagcatctccgggaa
cgctgggctctggtgaagatccccgaagaacttggccctgtcactgcacccaaggccact
atgccccatgcagaagcaacagtgcaggccattctggagatacaacctggccccaccttg
ccccatctggagaagtctcagatccagcaggacctagcagctactcgggacaggctggct
gatctggtgctgaggctgcagctaacacaacgagagaagcgtgggttggagctgcgggag
gctgcactgcgggcccagggccctgcccaccagctactcctgcagcagcttcgctgggag
cgggctcactttgcgggtgatggcagcagtggaggcagtagcgaggacccaagcagcgag
gaggaggctggggaggacagacagcagcactaccagggccctcttgccctcctggatggt
cagatgggcaaagtgtgggactctgagaatgtgtcccaggaactgtcagcgtccttggcc
cgggcaatagacctgcgggcacagctgcagtccctgcggcagcagctggaacaggtgact
cagaagggccgaaccagacgtgttcagagtgccgagctgtccagagaactgtgcaaggct
cacagtgctctggccttggccttcagaggagcccaccggaagcaggaagagcaacgcctg
aagttggagcagcaggtggctcggttgcaggctcagcaggcagaagagctggcagtgctg
acagccaccgctagggccctggggaagcctggggcaccccagccagcccagactttcctg
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (18)   
   RefSeq(nuc) (4)   
   GenBank (7)   
   EMBL (7)   
Protein domain (3)   
   Pfam (3)   
All databases (51)   

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