KEGG   Mus musculus (house mouse): 237636
Entry
237636            CDS       T01002                                 
Symbol
Npc1l1, 9130221N23Rik, Gm243
Name
(RefSeq) NPC1 like intracellular cholesterol transporter 1
  KO
K14461  Niemann-Pick C1-like protein 1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04975  Fat digestion and absorption
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09154 Digestive system
   04975 Fat digestion and absorption
    237636 (Npc1l1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:mmu02000]
    237636 (Npc1l1)
Transporters [BR:mmu02000]
 Solute carrier family (SLC)
  SLC65: NPC-type cholesterol transporter
   237636 (Npc1l1)
SSDB
Motif
Pfam: Patched NPC1_N Sterol-sensing MMPL OSTbeta ACR_tran
Other DBs
NCBI-GeneID: 237636
NCBI-ProteinID: NP_997125
MGI: 2685089
Ensembl: ENSMUSG00000020447
UniProt: Z4YJC9 A3KMG9
Position
11:complement(6161011..6180245)
AA seq 1333 aa
MAAAWQGWLLWALLLNSAQGELYTPTHKAGFCTFYEECGKNPELSGGLTSLSNISCLSNT
PARHVTGDHLALLQRVCPRLYNGPNDTYACCSTKQLVSLDSSLSITKALLTRCPACSENF
VSIHCHNTCSPDQSLFINVTRVVQRDPGQLPAVVAYEAFYQRSFAEKAYESCSRVRIPAA
ASLAVGSMCGVYGSALCNAQRWLNFQGDTGNGLAPLDITFHLLEPGQALADGMKPLDGKI
TPCNESQGEDSAACSCQDCAASCPVIPPPPALRPSFYMGRMPGWLALIIIFTAVFVLLSV
VLVYLRVASNRNKNKTAGSQEAPNLPRKRRFSPHTVLGRFFESWGTRVASWPLTVLALSF
IVVIALSVGLTFIELTTDPVELWSAPKSQARKEKAFHDEHFGPFFRTNQIFVTAKNRSSY
KYDSLLLGPKNFSGILSLDLLQELLELQERLRHLQVWSHEAQRNISLQDICYAPLKPHNT
SLTDCCVNSLLQYFQNNHTLLLLTANQTLNGQTSLVDWKDHFLYCANAPLTYKDGTALAL
SCIADYGAPVFPFLAVGGYQGTDYSEAEALIITFSINNYPADDPRMAHAKLWEEAFLKEM
QSFQRSTADKFQIAFSAERSLEDEINRTTIQDLPVFAISYLIVFLYISLALGSYSRWSRV
AVDSKATLGLGGVAVVLGAVVAAMGFYSYLGVPSSLVIIQVVPFLVLAVGADNIFIFVLE
YQRLPRMPGEQREAHIGRTLGSVAPSMLLCSLSEAICFFLGALTSMPAVRTFALTSGLAI
IFDFLLQMTAFVALLSLDSKRQEASRPDVVCCFSSRNLPPPKQKEGLLLCFFRKIYTPFL
LHRFIRPVVLLLFLVLFGANLYLMCNISVGLDQDLALPKDSYLIDYFLFLNRYLEVGPPV
YFDTTSGYNFSTEAGMNAICSSAGCESFSLTQKIQYASEFPNQSYVAIAASSWVDDFIDW
LTPSSSCCRIYTRGPHKDEFCPSTDTSFNCLKNCMNRTLGPVRPTTEQFHKYLPWFLNDT
PNIRCPKGGLAAYRTSVNLSSDGQIIASQFMAYHKPLRNSQDFTEALRASRLLAANITAE
LRKVPGTDPNFEVFPYTISNVFYQQYLTVLPEGIFTLALCFVPTFVVCYLLLGLDIRSGI
LNLLSIIMILVDTIGLMAVWGISYNAVSLINLVTAVGMSVEFVSHITRSFAVSTKPTRLE
RAKDATIFMGSAVFAGVAMTNFPGILILGFAQAQLIQIFFFRLNLLITLLGLLHGLVFLP
VVLSYLGPDVNQALVLEEKLATEAAMVSEPSCPQYPFPADANTSDYVNYGFNPEFIPEIN
AASSSLPKSDQKF
NT seq 4002 nt   +upstreamnt  +downstreamnt
atggcagctgcctggcagggatggctgctctgggccctgctcctgaattcggcccagggt
gagctctacacacccactcacaaagctggcttctgcaccttttatgaagagtgtgggaag
aacccagagctttctggaggcctcacatcactatccaatatctcctgcttgtctaatacc
ccagcccgccatgtcacaggtgaccacctggctcttctccagcgcgtctgtccccgccta
tacaatggccccaatgacacctatgcctgttgctctaccaagcagctggtgtcattagac
agtagcctgtctatcaccaaggccctccttacacgctgcccggcatgctctgaaaatttt
gtgagcatacactgtcataatacctgcagccctgaccagagcctcttcatcaatgttact
cgcgtggttcagcgggaccctggacagcttcctgctgtggtggcctatgaggccttttat
caacgcagttttgcagagaaggcctatgagtcctgtagccgggtgcgcatccctgcagct
gcctcgctggctgtgggcagcatgtgtggagtgtatggctctgccctctgcaatgctcag
cgctggctcaacttccaaggagacacagggaatggcctggctccgctggacatcaccttc
cacctcttggagcctggccaggccctggcagatgggatgaagccactggatgggaagatc
acaccctgcaatgagtcccagggtgaagactcggcagcctgttcctgccaggactgtgca
gcatcctgccctgtcatccctccgcccccggccctgcgcccttctttctacatgggtcga
atgccaggctggctggctctcatcatcatcttcactgctgtctttgtattgctctctgtt
gtccttgtgtatctccgagtggcttccaacaggaacaagaacaagacagcaggctcccag
gaagcccccaacctccctcgtaagcgcagattctcacctcacactgtccttggccggttc
ttcgagagctggggaacaagggtggcctcatggccactcactgtcttggcactgtccttc
atagttgtgatagccttgtcagtaggcctgacctttatagaactcaccacagaccctgtg
gaactgtggtcggcccctaaaagccaagcccggaaagaaaaggctttccatgacgagcat
tttggccccttcttccgaaccaaccagatttttgtgacagctaagaacaggtccagctac
aagtacgactccctgctgctagggcccaagaacttcagtgggatcctatccctggacttg
ctgcaggagctgttggagctacaggagagacttcgacacctgcaagtgtggtcccatgag
gcacagcgcaacatctccctccaggacatctgctatgctcccctcaaaccgcataacacc
agcctcactgactgctgtgtcaacagcctccttcaatacttccagaacaaccacacactc
ctgctgctcacagccaaccagactctgaatggccagacctccctggtggactggaaggac
catttcctctactgtgccaatgcccctctcacgtacaaagatggcacagccctggccctg
agctgcatagctgactacggggcacctgtcttccccttccttgctgttgggggctaccaa
gggacggactactcggaggcagaagccctgatcataaccttctctatcaataactacccc
gctgatgatccccgcatggcccacgccaagctctgggaggaggctttcttgaaggaaatg
caatccttccagagaagcacagctgacaagttccagattgcgttctcagctgagcgttct
ctggaggacgagatcaatcgcactaccatccaggacctgcctgtctttgccatcagctac
cttatcgtcttcctgtacatctccctggccctgggcagctactccagatggagccgagtt
gcggtggattccaaggctactctgggcctaggtggggtggctgttgtgctgggagcagtc
gtggctgccatgggcttctactcctacctgggtgtcccctcctctctggtcatcattcaa
gtggtacctttcctggtgctggctgtgggagctgacaacatcttcatctttgttcttgag
taccagaggctgcctaggatgcccggggagcagcgagaggctcacattggccgcaccctg
ggtagtgtggcccccagcatgctgctgtgcagcctctctgaggccatctgcttctttcta
ggggccctgacctccatgccagctgtgaggacctttgccttgacctctggcttagcaatc
atctttgacttcctgctccagatgacagcctttgtggccctgctctccctggatagcaag
aggcaggaggcctctcgccccgacgtcgtgtgctgcttttcaagccgaaatctgccccca
ccgaaacaaaaagaaggcctcttactttgcttcttccgcaagatatacactcccttcctg
ctgcacagattcatccgccctgttgtgctgctgctctttctggtcctgtttggagcaaac
ctctacttaatgtgcaacatcagcgtggggctggaccaggatctggctctgcccaaggat
tcctacctgatagactacttcctctttctgaaccggtacttggaagtggggcctccagtg
tactttgacaccacctcaggctacaacttttccaccgaggcaggcatgaacgccatttgc
tctagtgcaggctgtgagagcttctccctaacccagaaaatccagtatgccagtgaattc
cctaatcagtcttatgtggctattgctgcatcctcctgggtagatgacttcatcgactgg
ctgaccccatcctcctcctgctgccgcatttatacccgtggcccccataaagatgagttc
tgtccctcaacggatacttccttcaactgtctcaaaaactgcatgaaccgcactctgggt
cccgtgagacccacaacagaacagtttcataagtacctgccctggttcctgaatgatacg
cccaacatcagatgtcctaaagggggcctagcagcgtatagaacctctgtgaatttgagc
tcagatggccagattatagcctcccagttcatggcctaccacaagcccttacggaactca
caggactttacagaagctctccgggcatcccggttgctagcagccaacatcacagctgaa
ctacggaaggtgcctgggacagatcccaactttgaggtcttcccttacacgatctccaat
gtgttctaccagcaatacctgacggttctccctgagggaatcttcactcttgctctctgc
ttcgtgcccacctttgtggtctgctacctcctactgggcctggacatacgctcaggcatc
ctcaacctgctctccatcattatgatcctcgtggacaccatcggcctcatggctgtgtgg
ggtatcagctacaatgctgtgtccctcatcaaccttgtcacggcagtgggcatgtctgtg
gagttcgtgtcccacattacccggtcctttgctgtaagcaccaagcctacccggctggag
agagccaaagatgctactatcttcatgggcagtgcggtgtttgctggagtggccatgacc
aacttcccgggcatcctcatcctgggctttgctcaggcccagcttatccagattttcttc
ttccgcctcaacctcctgatcaccttgctgggtctgctacacggcctggtcttcctgccc
gttgtcctcagctatctggggccagatgttaaccaagctctggtactggaggagaaacta
gccactgaggcagccatggtctcagagccttcttgcccacagtaccccttcccggctgat
gcaaacaccagtgactatgttaactacggctttaatccagaatttatccctgaaattaat
gctgctagcagctctctgcccaaaagtgaccaaaagttctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (16)   
   RefSeq(nuc) (2)   
   GenBank (7)   
   EMBL (7)   
Protein domain (6)   
   Pfam (6)   
All databases (70)   

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