KEGG   Mus musculus (house mouse): 237911
Entry
237911            CDS       T01002                                 
Symbol
Brip1, 3110009N10Rik, 8030460J03Rik, Bach1, FACJ, Fancj, OF
Name
(RefSeq) BRCA1 interacting protein C-terminal helicase 1
  KO
K15362  fanconi anemia group J protein [EC:5.6.2.3]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03440  Homologous recombination
mmu03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    237911 (Brip1)
   03460 Fanconi anemia pathway
    237911 (Brip1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmu03400]
    237911 (Brip1)
Enzymes [BR:mmu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     237911 (Brip1)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     237911 (Brip1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     237911 (Brip1)
SSDB
Motif
Pfam: DEAD_2 Helicase_C_2 DEAD DUF1866
Other DBs
NCBI-GeneID: 237911
NCBI-ProteinID: NP_840094
MGI: 2442836
Ensembl: ENSMUSG00000034329
UniProt: Q5SXJ3
Position
11:complement(85948957..86092041)
AA seq 1174 aa
MSSVLSDYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSA
LAWQQSLSEKPVDEGLNKKPEAPPSCSCACHSKNFTYSDTNLDTSPHFNSPSKPSSGRNG
VSTPCQDSPEKNTLAAKLSAKKQASIHRDEDDDFQVEKKRIRPLETTQQIRKRHCLEKDV
HHVDARLASEKRVKPESPIGKSFSDRKDSFQNVDGLCSRCCCSAKQGNNQEPANTVKKDH
GGQCKRPKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHSCVHPEVVGNFNRKEK
CMELLDGKHGKSCYFYHGVHKISNQQTLQHLQGMSRAWDIEELVSLGRKLKACPYYTARE
LIEDADIVFCPYNYLLDSQIRETMDIKLKGQVVILDEAHNIEDCARESASYSVTEVQLRF
ARDELDSLINGNIRKKSHEPLRDVCYNLINWLETNSKHLVERGYESSCKIWSGNEMLLNL
YRMGITTATFPVLQRHLSAVLQKEEKVTPIHGKEEAIQIPIISASTQVVLKGLFMVLDYL
FRENSRFADDYKVAIQQTYSWTNQIAIFDKTGVLAVPKNKKHSRQKIGVNALNFWCLNPA
VAFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFSIQLEANHVISNSQVWVGTVGSGPKG
RNLCATFQHTETFEFQDEVGMLLLSVCQTVSQGILCFLPSYKLLEKLRERWIFTGLWHSL
ESVKTVIAEPQGGEKTDFDELLQVYYDAIKFKGEKDGALLIAVCRGKVSEGLDFSDDNAR
AVITVGIPFPNVKDLQVELKRQYNDHHSKSRGLLPGRQWYEIQAYRALNQALGRCIRHKN
DWGALILVDDRFNNNPNRYISGLSKWVRQQIQHHSSFASALESLTEFSRRHQKVTNRSKK
DEKCTKDNEPTLEVACLEDSTFTSVSESSHQSPENSTEEAEVCVQELQCPQVATKSPSVA
SHGVSRRKKSDPGLRGESLQTMKTEKNEISRSSSPTFGKQTEPVNWPIFNSLRRHFNSKV
KNCTPVLKSSKNRAPGSSTFNKTALPLTGNCVPSNETADTSLGPCLQSEVIISPVKIEAT
PATNYSKQVFCCEKDLLPDTELSPGTEEAKCPSSNKAAETEVDDDSECFTPELFDPVDTN
EENGELVETDRSSHSSDCFSAEELFETATGFGQK
NT seq 3525 nt   +upstreamnt  +downstreamnt
atgtcctcagtgttgtctgactacaccatcggtggggtgaagatccactttccctgtaga
gcgtatccagcacagcttgcgatgatgaattctattgtcagaggactaaacagcagccaa
cactgtttgctggagagtcccacaggaagtggaaaaagtttagccttactttgttctgca
ttagcatggcagcaatctcttagtgagaagccagtggatgagggcctgaataaaaagcct
gaggcaccaccttcatgttcttgtgcatgccattcaaagaattttacctacagcgacaca
aacctggacacttcacctcatttcaatagtccaagcaaaccatcttctggaagaaatgga
gtctcaactccctgtcaagactctcctgaaaaaaatactctggctgcaaagttatctgcc
aagaaacaggcatctatacacagagacgaagatgatgattttcaggtagagaagaaaaga
atccgacccttagaaactacacagcagataagaaaacgtcattgtttggaaaaggacgtc
caccatgtagatgcacgactagcttcggaaaagagagtaaagcctgagtctccgatagga
aagtctttctccgacaggaaagactcttttcaaaatgtggatggcctttgttccaggtgc
tgctgttctgctaaacaaggaaacaaccaagagcctgcaaatactgttaagaaagatcac
gggggacaatgcaagagacctaaaatttattttgggacgcggacacacaagcagattgct
cagattaccagggagctccgtaagacagcttactcaggggtcccgatgactattctttcc
agcagggaccacagctgtgtccatcctgaagtggtggggaatttcaacagaaaggagaag
tgcatggagctgctggatggcaagcacgggaagtcctgctatttctatcatggtgttcat
aaaattagtaatcagcagacactgcagcaccttcagggcatgtccagagcctgggacata
gaagaactagtcagcctcgggaggaaactgaaagcttgtccctactatacagctcgagaa
ctgatagaggatgctgacatagtgttttgtccctacaactaccttttagactcacaaata
agggaaactatggatataaagctgaaaggacaagttgtcattttagatgaagctcacaac
attgaagactgtgctcgggaatcagcaagctacagtgtaaccgaagttcagcttaggttt
gctcgggatgagctagatagtttgatcaacggtaacataaggaagaaaagccacgagccc
ctacgagatgtgtgctataacctcatcaattggttagaaacaaattctaagcatcttgta
gaaaggggttatgagtcgtcttgtaaaatatggagtggaaatgagatgctcttaaactta
tacaggatgggcatcaccacggctacttttccagttttgcagaggcatctctcagctgtt
cttcaaaaagaagagaaagtcacaccaatccatggtaaagaggaggcaatacaaatccct
attatcagtgcatcaactcaagtcgtgctcaaaggactctttatggtgcttgactatctc
tttagagaaaatagcagatttgcagatgattataaagttgctattcaacagacttactcc
tggacaaatcagattgctatttttgataaaactggagtcttggctgtaccaaaaaataag
aaacattcacgacagaaaattggagttaatgcgctaaacttttggtgtttaaatccagct
gtggccttttcagatattaatgacaaagtacggaccattgttctaacatcaggaacactc
tcacccctgaaatccttttcatctgagcttggtgtcacatttagcatccaactggaggct
aaccatgtcatcagtaactcacaggtttgggttggtactgttggctcaggccctaagggt
cggaatctctgcgctacctttcagcatactgaaacatttgagttccaggatgaagtggga
atgcttctgttatctgtgtgccagactgtgagccaaggaattctgtgctttttgccatct
tacaagctattagagaaattaagagaacgttggattttcactggcctatggcatagtttg
gagtcagtgaagacagtcattgcagaaccccaaggaggagaaaaaactgattttgatgaa
ttgctgcaagtgtactatgacgccatcaagttcaaaggagaaaaggatggagcccttctc
atagcagtctgtcgtggcaaggtgagcgagggtctggatttctcagatgataacgcccgt
gctgtcataaccgtagggattcctttcccaaatgtgaaggatcttcaggtggagctaaaa
cgacaatacaatgaccaccactcaaaatcgagaggtcttctgcctggccgtcagtggtat
gaaattcaagcataccgagccttgaatcaggctctaggcagatgtattcggcacaaaaat
gattggggagctcttattctagtggacgatcgcttcaataacaatccaaaccgctatata
tcaggactttctaaatgggtgaggcagcagattcagcaccactcaagctttgcaagtgcc
ctggagtcgctgaccgagttctccagaagacaccagaaagttactaatagatccaaaaaa
gacgaaaaatgtacaaaagacaatgagcctactctggaagtggcctgtttggaggatagc
acttttacaagtgtgtcagaatcaagtcatcagtcaccagaaaactcgacagaagaagca
gaagtgtgtgtccaggagcttcagtgtccccaggtggctactaaaagcccctcagtagca
agccacggtgtttccagaaggaagaaaagtgatccaggactaagaggagagtctcttcag
acaatgaaaacagaaaaaaatgagatttcccgatcttcaagcccaacttttggaaagcaa
acagagccagtcaactggcctatctttaattctctaagacggcatttcaatagtaaagta
aaaaattgcacaccagtactcaagtcatcaaagaaccgtgcccctggttcttccactttc
aataaaactgctttgccactcacaggtaactgtgtgccctcaaacgaaacagcagacaca
tcactgggaccttgccttcagtcagaagtcataatttcaccagtgaagattgaagctact
cctgctacgaattattccaaacaggtgttctgctgtgagaaagacctactcccggatact
gaattgtcgccaggaactgaagaagccaagtgtcccagctcaaacaaagctgctgaaaca
gaagtggatgatgactctgagtgttttacacctgaactttttgatcctgtcgataccaac
gaagaaaacggtgaactggttgaaactgatagatcaagtcatagttcagattgtttttca
gcggaagagctttttgaaactgcaactggatttgggcagaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (23)   
   RefSeq(nuc) (3)   
   GenBank (10)   
   EMBL (10)   
Protein domain (4)   
   Pfam (4)   
All databases (73)   

Download RDF
DBGET integrated database retrieval system