KEGG   Mus musculus (house mouse): 23894
Entry
23894             CDS       T01002                                 
Symbol
Gtf2h2, 44kDa, BTF2_p44, BTF2-p44, Btf2p44, p44
Name
(RefSeq) general transcription factor II H, polypeptide 2
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03022  Basal transcription factors
mmu03420  Nucleotide excision repair
mmu05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    23894 (Gtf2h2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    23894 (Gtf2h2)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    23894 (Gtf2h2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    23894 (Gtf2h2)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    23894 (Gtf2h2)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     23894 (Gtf2h2)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     23894 (Gtf2h2)
SSDB
Motif
Pfam: Ssl1 VWA_2 C1_4 VWA HscB_4_cys VWA_3
Other DBs
NCBI-GeneID: 23894
NCBI-ProteinID: NP_071294
MGI: 1345669
Ensembl: ENSMUSG00000021639
UniProt: Q9JIB4 Q7TPV0
Position
13:complement(100596726..100629123)
AA seq 396 aa
MDEEPERTKRWEGGYERTWEILKEDETGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKTAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDETHYKELLAHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDNNSTEPGLTLGGYFCPQCRAKYC
ELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEISLEEYKGERFCYGCQGELKDQHVYV
CTVCQNVFCVDCDVFVHDSLHCCPGCIHKIPTPSGI
NT seq 1191 nt   +upstreamnt  +downstreamnt
atggatgaagaacctgagagaaccaagcggtgggaaggaggctatgagagaacctgggaa
attcttaaagaagatgaaactggatcacttaaagctacaatagaagatattctcttcaag
gcaaagaggaaaagagtgtttgagcaccatggacaagtccgacttggaatgatgcgccac
ctgtatgtggtggtggatggatcgagaacaatggaagatcaggatttaaagcccaataga
ctgacttgcactttaaagttgctggaatactttgtagaagaatattttgatcaaaaccct
atcagtcagattggaataattgtaactaagagtaaaagagctgaaaaactgactgaactc
tcaggaaacccaaggaaacatataacatctttgaagaaagctgtagatatgacctgccat
ggagaaccatcgctctataattccttaagcatggctatgcagaccctaaaacacatgcct
ggacatacaagtagagaagtgctcatcatcttcagcagcctcaccacctgtgatccatct
aatatttacgatctcatcaagaccctgaagacagctaaaattagagtgtctgttattgga
ttatctgcggaggttcgagtttgtactgtacttgctcgtgaaactggtggcacataccat
gttatcttagatgaaacccattacaaggagttgttggcacatcatgtgagcccccctcct
gccagctcaagctccgagtgctcactcattcgcatgggattccctcagcataccattgct
tctttgtctgatcaggatgcaaaaccatccttcagcatggcgcatttggataacaacagc
actgagccagggcttacactgggaggctacttctgcccacagtgccgagcaaagtactgc
gagcttcctgttgaatgtaaaatatgtggtcttactttggtgtctgcacctcatttggca
agatcttaccatcatttatttcctttggatgcttttcaagaaatttccctagaagaatat
aaaggagaaaggttttgttatggatgtcagggggaattgaaagaccaacatgtctatgtt
tgcacagtgtgccaaaatgttttttgtgtggactgtgatgtctttgttcatgactctctc
cattgttgtcctggctgtattcataagatcccaactccttcaggtatttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (25)   
   RefSeq(nuc) (3)   
   GenBank (11)   
   EMBL (11)   
Protein domain (6)   
   Pfam (6)   
All databases (53)   

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