KEGG   Mus musculus (house mouse): 24046
Entry
24046             CDS       T01002                                 
Symbol
Scn11a, NSS2, NaN, NaT, NaV1.9, SNS2
Name
(RefSeq) sodium channel, voltage-gated, type XI, alpha
  KO
K04843  voltage-gated sodium channel type XI alpha
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:mmu04040]
    24046 (Scn11a)
Ion channels [BR:mmu04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   24046 (Scn11a)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc PKD_channel GPHH
Other DBs
NCBI-GeneID: 24046
NCBI-ProteinID: NP_036017
MGI: 1345149
Ensembl: ENSMUSG00000034115
UniProt: Q9R053
Position
9:complement(119582829..119654522)
AA seq 1765 aa
MEERYYPVIFPDERNFRPFTFDSLAAIEKRITIQKEKKKSKDKAATEPQPRPQLDLKASR
KLPKLYGDVPPDLIAKPLEDLDPFYKDHKTFMVLNKKRTIYRFSAKRALFILGPFNPIRS
FMIRISVHSVFSMFIICTVIINCMFMANNSSVDSRPSSNIPEYVFIGIYVLEAVIKILAR
GFIVDEFSYLRDPWNWLDFIVIGTAIAPCFLGNKVNNLSTLRTFRVLRALKAISVISGLK
VIVGALLRSVKKLVDVMVLTLFCLSIFALVGQQLFMGILSQKCIKDDCGPNAFSNKDCFV
KENDSEDFIMCGNWLGRRSCPDGSTCNKTTFNPDYNYTNFDSFGWSFLAMFRVMTQDSWE
KLYRQILRTSGIYFVFFFVVVIFLGSFYLLNLTLAVVTMAYEEQNRNVAAETEAKEKMFQ
EAQQLLREEKEALVAMGIDRTSLNSLQASSFSPKKRKFFGSKTRKSFFMRGSKTARASAS
DSEDDASKNPQLLEQTKRLSQNLPVELFDEHVDPLHRQRALSAVSILTITMQEQEKSQEP
CFPCGKNLASKYLVWECSPPWLCIKKVLQTIMTDPFTELAITICIIVNTVFLAMEHHNMD
NSLKDILKIGNWVFTGIFIAEMCLKIIALDPYHYFRHGWNIFDSIVALVSLADVLFHKLS
KNLSFLASLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMRLF
GAKFNKTCSTSPESLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQEMEGSPLCVIVFV
LIMVVGKLVVLNLFIALLLNSFSNEEKDGNPEGETRKTKVQLALDRFSRAFYFMARALQN
FCCKRCRRQNSPKPNEATESFAGESRDTATLDTRSWKEYDSEMTLYTGQAGAPLAPLAKE
EDDMECCGECDASPTSQPSEEAQACDLPLKTKRLPSPDDHGVEMEVFSEEDPNLTIQSAR
KKSDAASMLSECSTIDLNDIFRNLQKTVSPQKQPDRCFPKGLSCIFLCCKTIKKKSPWVL
WWNLRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVNLPSRPQVEKLLKCTDNIFTFIF
LLEMILKWVAFGFRKYFTSAWCWLDFLIVVVSGLSLTNLPNLKSFRNLRALRPLRALSQF
EGMKVVVNALMSAIPAILNVLLVCLIFWLIFCILGVNFFSGKFGRCINGTDINKYFNASN
VPNQSQCLVSNYTWKVPNVNFDNVGNAYLALLQVATYKGWLDIMNAAVDSRGKDEQPAFE
ANLYAYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKLGGQDIFMTEEQKKYYNAMKKL
GTKKPQKPIPRPLNKCQAFVFDLVTSQVFDVIILGLIVTNMIIMMAESEGQPNEVKKIFD
ILNIVFVVIFTVECLIKVFALRQHYFTNGWNLFDCVVVVLSIISTLVSGLENSNVFPPTL
FRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMNWFSK
VKRGSGIDDIFNFDTFSGSMLCLFQITTSAGWDALLNPMLESKASCNSSSQESCQQPQIA
IVYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFEIFYEIWEKFDPEATQF
IQYSSLSDFADALPEPLRVAKPNRFQFLMMDLPMVMGDRLHCMDVLFAFTTRVLGNSSGL
DTMKAMMEEKFMEANPFKKLYEPIVTTTKRKEEEECAAVIQRAYRRHMEKMIKLKLKGRS
SSSLQVFCNGDLSSLDVPKIKVHCD
NT seq 5298 nt   +upstreamnt  +downstreamnt
atggaggagaggtactatccagtgatcttcccagacgagaggaatttccgccccttcact
ttcgactctttggctgcaatagagaagcggatcaccatccaaaaggagaagaagaaatcc
aaagacaaggcagcaactgagccccagcctcggcctcagctcgacctaaaggcctccagg
aagttacctaagctctatggcgacgttccccctgaccttatagcgaagcccctggaagat
ctggacccattttacaaagaccataagacattcatggtattgaacaagaagagaacaatc
tatcgcttcagcgccaagagggccttgttcattctggggccttttaatcccatcagaagc
ttcatgattcgcatctctgtccattcagtcttcagcatgttcattatctgcacagtgatc
atcaactgtatgttcatggctaataattcttctgtggacagtcgtcctagcagtaacatt
cccgaatacgtcttcattgggatttatgttttagaagctgtgattaaaatattggcaaga
ggcttcattgtggatgagttttcctacctccgagatccttggaactggctggacttcatt
gtcatcggaacagcgatagcgccttgttttctcggtaacaaagtcaataatctttccact
ctacgtaccttccgagtgttgagagctctgaaagccatttctgtaatctcaggtctgaag
gtcatcgtgggtgccctgctgcgctccgtgaagaagctagtggacgtgatggtcctcact
ctcttttgcctcagcatctttgccctggttggtcagcagctcttcatgggaattctgagc
cagaaatgtattaaggacgactgtggccctaacgctttttccaacaaggattgctttgta
aaagaaaatgatagcgaggacttcataatgtgtggcaactggctcggcagaagatcctgc
cccgatggttccacgtgcaataaaaccacatttaacccagattataattatacaaacttt
gacagctttggctggtcttttctcgccatgttccgggttatgactcaagactcctgggag
aagctttatcgacagatccttcgcacctccgggatctactttgtcttcttcttcgtggtc
gtcatcttcctgggctctttctacctgcttaacttaaccctggctgtcgtcaccatggct
tacgaggaacagaacagaaatgtcgctgccgagacagaggccaaggagaagatgtttcag
gaagcccagcagctgttgagggaggaaaaggaggctctggttgccatgggaattgacaga
acttcccttaattccctccaagcttcgtccttttccccaaagaagaggaagttttttggc
agtaagacaagaaagtccttctttatgagagggtccaagacagcccgagcctcagcgtcc
gattcagaggacgatgcctctaaaaacccacaactccttgagcaaacaaaacgactatcc
cagaacttgcccgtagaactctttgatgagcacgtggaccccctccataggcagagagcg
ctgagtgccgtcagtatcttaaccatcaccatgcaggaacaagaaaaatcccaggagcct
tgtttcccgtgtgggaaaaacttggcatccaagtacctggtgtgggaatgtagccctccg
tggctgtgcataaagaaggtcctgcagactatcatgacagaccccttcactgagctggcc
atcaccatctgcatcatcgtcaatactgtcttcttggccatggaacaccacaatatggat
aactctttaaaagacatactgaaaataggaaactgggttttcactggaattttcatagcg
gaaatgtgtctcaagatcattgcgctagacccttaccactacttccggcacggctggaac
atctttgacagcattgtggcccttgtgagtctcgctgacgtgctcttccacaaactgtct
aaaaacctctccttcttggcttccctcagagtgctgagggtcttcaagttagccaaatcc
tggcccacattaaacactctcattaagatcatcggccactccgtgggtgcgctcggaaac
ctgactgtggtcctaacgatcgtggtcttcatcttttccgtggttggcatgcggctcttt
ggtgccaagtttaacaagacttgctccacctctccggagtccctccggcgctggcacatg
ggtgatttctaccattccttcctggtggtgttccgcatcctctgtggggagtggatcgag
aacatgtgggaatgcatgcaggagatggaaggctccccgctgtgtgtcatcgtctttgtg
ctgatcatggtggtcgggaagctcgtggtgcttaacctcttcattgccttgctgctcaat
tccttcagcaatgaggaaaaggatgggaacccagaaggagagaccaggaaaaccaaagtg
cagctagccctggatcggttcagccgagcgttctacttcatggcgcgcgctcttcagaat
ttctgttgcaagagatgcaggaggcaaaactcgccaaagccaaatgaggcaacagaaagc
tttgctggtgagagtagagacacagccaccctggatacaaggtcctggaaggagtatgat
tcagaaatgactctgtacactgggcaggccggggctccactggccccactggcaaaagaa
gaggacgatatggaatgttgtggtgaatgtgatgcctcacctacctcacagcctagtgag
gaagctcaggcctgtgacctccctctgaagaccaagcggctccccagcccagatgaccac
ggggttgaaatggaagtgttttccgaagaagatccgaatttaaccatacagagtgctcga
aagaagtctgatgcggcaagcatgctctcagaatgcagcacaatagacctgaatgatatc
tttagaaatttacagaaaacagtttccccccaaaagcaaccagatcgatgctttcccaag
ggcctcagttgtatctttctatgttgcaaaacaatcaaaaaaaagtccccctgggtcctg
tggtggaatcttcggaaaacctgctaccaaatcgtgaagcatagctggtttgagagcttc
ataatttttgtcatcctgctgagcagcggagcactgatattcgaagatgtcaatcttccc
agccggccccaagttgaaaaattactgaagtgtaccgataatattttcacatttattttt
ctcctggaaatgattttgaagtgggtggcctttggattccggaagtatttcaccagtgcc
tggtgctggctcgatttcctcattgtggtggtgtctgggctcagcctcacgaacttacca
aacttgaagtccttccggaatctgcgagcgctgagacctctgcgggcactgtctcagttt
gaaggaatgaaggttgttgtcaatgccctcatgagtgccatacctgccatcctcaatgtc
ttgctggtctgcctcattttctggctcatattttgtatcctgggagtaaattttttttct
gggaagtttggaagatgcattaatggaacagacataaataaatatttcaacgcttccaat
gttccaaaccaaagccaatgtttagttagtaattacacgtggaaagtcccgaatgtcaac
tttgacaacgtggggaatgcctaccttgccctgctgcaagtggcgacctataagggctgg
ctggacattatgaatgcagctgttgattccagagggaaagatgagcagccggcctttgag
gcgaatctatacgcatacctttacttcgtggtttttatcatcttcggctcattctttacc
ctgaacctctttatcggtgttattattgacaacttcaatcagcagcagaaaaagttaggt
ggccaagacatttttatgacagaagaacagaagaaatattacaatgcaatgaaaaagtta
ggaaccaagaagcctcaaaagcccatcccaaggcccctgaacaaatgtcaagccttcgtg
ttcgatttggtcacaagccaggtctttgacgtcatcattctgggtcttattgtcacaaac
atgattatcatgatggctgaatctgaaggccagcccaacgaagtgaagaaaatctttgat
attctcaacatagtcttcgtggtcatctttaccgtagagtgtctcatcaaagtctttgct
ttgaggcaacactacttcaccaatggctggaacttatttgattgtgtggtcgtggttctt
tccatcattagtaccttggtttctggcttggagaacagcaacgtcttcccgcccacactc
ttcaggattgtccgcttggctcggatcggtcgaatcctcagactggtccgggcggctcga
ggaatcaggacactccttttcgcgttgatgatgtctctcccctctctcttcaacatcggt
ctgcttctctttctggtgatgttcatttatgccatctttgggatgaactggttttccaaa
gtgaagagaggctctgggattgatgacatcttcaactttgacactttctcgggcagcatg
ctctgcctcttccagataaccacttcagccggctgggatgctctcctcaaccccatgctg
gaatcaaaagcctcttgcaattcctcctcccaagagagctgtcagcagccgcagatagcc
atagtctacttcgtcagctacatcatcatctcctttctcattgtggttaacatgtacata
gctgtgattctagagaacttcaacacagccacagaggagagcgaggaccccctgggcgaa
gacgactttgagatcttctatgagatctgggagaagtttgaccccgaagcaacacagttc
atccagtactcatccctctctgacttcgccgacgccctgcccgagccgttgcgtgtggcc
aagcccaacaggtttcagtttctcatgatggacttgcccatggtgatgggtgatcgcctc
cattgcatggatgttctctttgctttcaccaccagggtcctcgggaactccagcggcttg
gataccatgaaagccatgatggaggagaagttcatggaggccaatcctttcaagaagttg
tacgagcccattgtcaccaccacaaagaggaaggaggaggaggaatgtgccgctgtcatc
cagagggcctaccggagacacatggagaagatgatcaagctgaagctgaaaggcaggtca
agttcatcgctccaggtgttttgcaatggagacttgtctagcttggatgtgcccaagatc
aaggttcattgtgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (78)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (72)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (16)   
   RefSeq(nuc) (2)   
   GenBank (7)   
   EMBL (7)   
Protein domain (4)   
   Pfam (4)   
All databases (105)   

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