KEGG   Mus musculus (house mouse): 24061
Entry
24061             CDS       T01002                                 
Symbol
Smc1a, 5830426I24Rik, SMC-1A, Sb1.8, Smc1, Smc1alpha, Smc1l1, Smcb, mKIAA0178
Name
(RefSeq) structural maintenance of chromosomes 1A
  KO
K06636  structural maintenance of chromosome 1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04110  Cell cycle
mmu04114  Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    24061 (Smc1a)
   04114 Oocyte meiosis
    24061 (Smc1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    24061 (Smc1a)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    24061 (Smc1a)
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    24061 (Smc1a)
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_23 AAA_15 AAA_21 AAA_29 ABC_tran Mce4_CUP1
Other DBs
NCBI-GeneID: 24061
NCBI-ProteinID: NP_062684
MGI: 1344345
Ensembl: ENSMUSG00000041133
UniProt: Q9CU62
Structure
Position
X:150799386..150844969
AA seq 1233 aa
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE
ESVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL
IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ
NT seq 3702 nt   +upstreamnt  +downstreamnt
atgggtttcctgaaactgattgagatcgagaactttaaatcgtacaagggtcgacagatt
atcggaccatttcagaggtttaccgccatcattggacccaatggctctggtaagtcaaat
ctcatggatgccatcagctttgtgcttggtgaaaagaccagcaacctgagggtaaagacc
ctgcgggacctgatacatggagcacctgtgggcaagccggctgccaaccgagcctttgtc
agcatggtctactcggaggagggtgctgaggaccgtacctttgcccgagtcattgtaggg
ggctcttctgagtacaagatcaacaacaaagttgtccagctacatgaatacagtgaagag
ttagagaagttgggcattctcatcaaagctcgtaacttcctcgtcttccagggtgcagtg
gagtctattgccatgaagaaccccaaggagaggacagctctgtttgaagaaattagtcgc
tctggggaacttgcacaggagtatgacaagcgaaagaaagaaatggtgaaggctgaagaa
gacacacagtttaattatcatcgcaagaaaaatattgcagctgaacgaaaggaggccaaa
caagaaaaggaagaggcggaccgctatcagcgcctgaaggatgaggtagtacgagcacag
gtacagttgcagctctttaaactctaccacaacgaagtggagattgagaagctcaacaag
gaactggcctcgaagaacaaggaaattgagaaggacaagaagcggatggacaaggtagag
gatgagctgaaggagaagaagaaagagctgggaaaaatgatgcgggaacagcagcagatt
gagaaggagatcaaggaaaaggactcggaattgaatcagaagaggcctcagtacatcaaa
gcaaaagagaatacatcccacaaaatcaagaagctcgaagcagccaagaagtctcttcaa
aatgctcagaaacattataagaaacgtaaaggtgacatggatgagctggagaaggagatg
ctgtcagtggagaaggcccgacaggagtttgaagaacggatggaggaagagagtcagagt
cagggcagagacttgaccctggaggagaaccaggtaaagaaataccaccgattgaaagaa
gaagccagcaagagagcagctactttggctcaggagctggagaagttcaatcgagaccag
aaagctgaccaggaccgtctagatctggaagagcggaagaaagtagaaacagaggccaag
atcaagcaaaaactgcgggagattgaagagaatcagaaacggattgagaagctagaagaa
tatattaccactagcaagcagtctctagaggagcagaagaagctagagggagaactgacg
gaagaagtagagatggccaagcgtcgtattgatgagatcaataaggagctgaaccaggtg
atggagcaattaggggatgcacgaattgaccgacaggagagtagccgccagcagcgaaag
gcagaaataatggaaagcatcaagcgtctctaccctggctctgtgtatggccgcctcatt
gacctctgccagcctacacaaaagaagtatcagattgctgtgaccaaggttttagggaag
aacatggatgctattattgtagactcagagaagacaggtcgggactgtattcagtatatc
aaggagcaacgtggagagcctgagaccttcttgcctcttgactacctggaggtgaaacct
actgatgagaaactccgggagctgaagggggccaagctagtgattgatgtaattcgttat
gaaccacctcacattaaaaaagctctgcagtatgcttgtggcaatgcccttgtttgtgat
aatgtggaggatgctcgacgcattgcctttggaggtcaccaacgccacaagacagtggcg
ttggatggcaccctgttccagaagtcaggagttatctctggtggagccagtgatctcaag
gcaaaagcacggcgctgggatgagaaagcagtagacaaactgaaagaaaaaaaagaacgt
ttgacagaggagctgaaagagcagatgaaggcaaaacggaaagaggcagaactgcgtcaa
gtgcagtctcaggcccacgggcttcaaatgcggctgaagtactcacagagtgacctagaa
cagactaagacaaggcatcttgccctgaatctccaggaaaagtctaagctggagagtgaa
ctagccaacttcgggcctcgcattaatgatatcaagagaatcatacagagccgagagagg
gaaatgaaagacttgaaggagaagatgaaccaggtggaagatgaggtgtttgaagagttt
tgtcgggaaattggtgtgcgtaacatccgagaatttgaggaagaaaaggtgaagcggcag
aatgaaattgccaagaaacgcttggaatttgagaatcagaagactcgcttgggcatccaa
ttggattttgaaaagaatcagttgaaggaggaccaggataaagtacacatgtgggaacag
acggtgaaaaaggatgaaaatgagatagaaaagcttaagaaggaggaacaaagacacatg
aagataatagatgaaaccatggctcagcttcaagaccttaagaatcagcacctggccaaa
aagtcagaagtaaacgacaagaatcatgagatggaagagattcgcaagaagcttgggggt
gccaacaaggaaatgactcatttacagaaggaagtgacagccattgagaccaaacttgaa
cagaagcgcagtgaccgccacaacctgctacaggcctgtaagatgcaggacatcaaactg
ccactgtcaaagggcaccatggatgatattagtcaggaagaaggtagctcccagggagaa
gagtcagtgagtggttcccagagaacatccagtatctatgctcgagaggccctcattgag
attgactacggtgacctgtgtgaagatctgaaggatgcacaggcggaggaagaaatcaag
caagaaatgaacacactccagcaaaagctgaatgagcagcagagtgtgcttcagcggatt
gctgcccctaacatgaaggccatggaaaagctggagagtgtccgagacaagttccaggag
acctcagatgagtttgaagcagcacgaaagcgagcaaagaaggccaagcaggcatttgaa
cagataaagaaggagcgcttcgaccgattcaatgcttgctttgaatctgtggctaccaac
attgatgagatctataaggctctgtcccgtaacagcagtgcccaggcattcttgggccct
gagaatcctgaagagccctatttggatggcatcaactacaactgtgtagctcctggcaaa
cgtttccggcctatggacaatttgtcaggcggggagaagacagttgcagctctggccttg
ctttttgccatccatagctacaagccagcccccttcttcgtcctggatgagattgacgct
gccttggataacaccaacattggcaaggtggcaaattacatcaaggaacagtcaacttgc
aacttccaggccattgttatctctctcaaggaggaattctacaccaaggctgagagcctc
attggagtctatcctgagcaaggggactgtgtgatcagcaaagtcctgactttcgacctc
accaagtacccagatgccaaccccaaccccaatgaacaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (30)   
   RefSeq(nuc) (4)   
   GenBank (13)   
   EMBL (13)   
3D Structure (2)   
   PDB (2)   
Protein domain (8)   
   Pfam (8)   
All databases (88)   

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