KEGG   Mus musculus (house mouse): 245026
Entry
245026            CDS       T01002                                 
Symbol
Col6a6, E330019B14, E330026B02Rik
Name
(RefSeq) collagen, type VI, alpha 6
  KO
K06238  collagen type VI alpha
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04151  PI3K-Akt signaling pathway
mmu04510  Focal adhesion
mmu04512  ECM-receptor interaction
mmu04820  Cytoskeleton in muscle cells
mmu04974  Protein digestion and absorption
mmu05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    245026 (Col6a6)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    245026 (Col6a6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    245026 (Col6a6)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    245026 (Col6a6)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    245026 (Col6a6)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    245026 (Col6a6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmu04147]
    245026 (Col6a6)
   00536 Glycosaminoglycan binding proteins [BR:mmu00536]
    245026 (Col6a6)
Exosome [BR:mmu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   245026 (Col6a6)
Glycosaminoglycan binding proteins [BR:mmu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   245026 (Col6a6)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   245026 (Col6a6)
SSDB
Motif
Pfam: VWA VWA_2 Collagen Integrin_beta DUF2529
Other DBs
NCBI-GeneID: 245026
NCBI-ProteinID: NP_001096077
MGI: 2444259
Ensembl: ENSMUSG00000043719
UniProt: Q8C6K9
Position
9:complement(105566616..105705413)
AA seq 2265 aa
MLLVLCLTMICFHVCVNQDSGPEYADVVFLVDSSDHLGLKSFPLVKTFIHKMISSLPIEA
NKYRVALAQYSDALHNEFQLGTFKNRNPMLNHLKKNFGFIGGSLKIGNALQEAHRTYFSA
PTNGRDKKQFPPILVVLASAESEDDVEEAAKALREDGVKIISVGVQKASEENLKAMATSQ
FHFNLRTARDLSVFAPNMTEIIKDVTQYREGMADDIIVEACQGPSVADVVFLLDMAINGS
QEDLDHLKAFLGESISALDIKENCMRVGLVTYSNETRVISSLSTGNNKTEVLQRIQDLSP
QVGQAYTGAALRKTRKEIFSAQRGSRKNQGVPQIAVLVTHRASEDNVTKAAVNLRREGVT
IFTMGIEGANPDELEKIASHPAEQFTSKLGNFSELATHNQTFLKKLRNQITHTVSVFSER
TETLKSACVDTEEADIYLLIDGSGSTQPTDFHEMKTFLSEVVGMFNIAPHKVRVGAVQYA
DTWDLEFEISKYSNKPDLGKAIENIRQMGGNTNTGAALNFTLKLLQRAKKERGSKVPCHL
VVLTNGMSRDSVLGPAHKLREENIRVHAIGVKEANQTQLREIAGEEKRVYYVHEFDALRN
IRNQVVQEICAEEACRDMKADIMFLVDSSGSIGPENFSKMKMFMKNLVSKSQIGADRVQI
GVVQFSHENKEEFQLNTFMSQSDIANAIDRMTHIGETTLTGSALTFVSQYFSPDKGARPN
VRKFLILITDGEAQDIVRDPAIALRKEGVIIYSVGVFGSNVTQLEEISGKPEMVFYVENF
DILQHIEDDLVLGICSPREECKRIEVLDVVFVIDSSGSIDYQEYNIMKDFMIGLVKKADV
GKNQVRFGALKYADDPEVLFYLDELGTKLEVVSVLQNDHPMGGNTYTAEALAFSDHMFTE
ARGSRLHKGVPQVLIVITDGESHDAEKLNTTAKALRDKGILVLAVGIAGANSWELLAMAG
SSDKYYFVETFGGLKGIFSDVSASVCNSSKVDCEIEKVDLVFLMDGSNSIHPDDFQKMKG
FLVSVVQDFDVSLNRVRIGVAQFSDSYRSEFLLGTFTGEREISTQIEGIQQIFGYTHIGD
ALRKVKYYFQPDMGSRINAGTPQVLLVLTDGRSQDEVAQAAEELRHKGVDIYSVGIGDVD
DQELVQITGTAEKKLTVHNFDELKKVKKRIVRNICTSGGESNCFVDVVVGFDISSLQRGQ
TLLEGQPWMGSYLQDLLRAISSLNGVSCEVGTETQVSIAFQVTNAMERYPSKFEIYSENI
LSSLQGVTVNGPSRLNANLLSSLWDTFQNKSAARGKVVLLFSDGLDDGIEKLEQKSDELR
KEGLNALITIAVDGAADSSDLADLLYIEFGKGFEYRTQFTIGMRNLGSQLSRQLINVAER
TCCCLLCKCTGGDGAMGDPGSAGKKGPPGFKGSDGYLGEEGIAGERGASGPMGEQGTKGC
FGAKGPKGTRGLSGEEGEVGEDGLDGLDGEQGDHGIPGRRGEKGDEGSQGNPGRRGAAGD
RGAKGLRGDPGTPGRDSSIQGPKGLKGDLGRQGRRGWPGSPGTPGSRRKMVVHGRRGHIG
PQGNPGTPGPDGLAGSPGLRGPQGPRGEVGEKGEKGSLGMKGPQGPPGPGGQAGSQGHLG
SQGNKGEPGDLGEKGAAGFPGPRGLQGDDGSPGYGSIGRKGTKGQEGFPGESGLKGDIGD
PGDPGEAGPKGARGKTVSAGIPGEPGSPGEPGPPGRKGVKGARGLASFSTCDLIQYVRDH
SPGRHGKPECPVHPTELVFVLDQSRDVTEQDFERMKGMMVSLVRDVKVREANCPVGARVA
ILAYNSHTRHLIRFSDAYRKDQLLTAIKALPYERSSDSREIGKAMRFISRNVFKRTLPGA
HVRRIATFFSSGPSADAQTITTAAMEFSALDIVPVVIAFSNVPSVKRAFSIDDTGTFQVI
VVPSGSDEGPALERLQRCTFCYDLCKPDASCDQAKPPPIQSYLDTAFLLDGSRHVGSAEF
EDMRDFLEALLDHFEITSEPETSVTGDRVALLSHAPLDFLPNTQRSPVRTEFNLTSYSSK
RLMKRHVDQAVQQLHGDAFLGHALGWALDNVFLNTPNLRRNKVIFVISAGETSHLDAETL
KKESLRAKCHGYALFVFSLGPDWDDKELEDLASHPVDQHLIQLGRIHKPDHGYSVKFVKS
FINSIRHGINKYPPVNLKAKCNRLGSRDLKPPPRQFRSFVPGPQKANLKDHTAEAAKLFQ
DKKRLSSMLKGGRATISSLSRSTRYAFKQGKEAIKATSKLGKRSA
NT seq 6798 nt   +upstreamnt  +downstreamnt
atgctgctggttttgtgcctgacaatgatttgtttccacgtgtgtgtgaaccaagattct
ggccccgagtacgcagacgtggtgtttctggtggacagctccgatcacctagggcttaag
tcctttcctcttgtgaaaactttcatccacaagatgatcagcagcctccccatagaggcc
aacaagtaccgcgtggccctggcccagtacagcgatgctctccacaatgagttccagctg
ggcaccttcaagaacaggaaccccatgctgaaccacctgaagaagaacttcgggttcatc
ggtggctccctgaagatagggaacgccctgcaggaggctcacaggacctatttctctgct
cccacaaatggaagagacaagaaacagttccccccaatcctggtggtgctggcttcagca
gagtctgaggatgatgtggaagaggctgcgaaggccctgcgggaagatggggtgaaaatc
atctctgtgggggtgcagaaggcttctgaggaaaacctgaaggcgatggccacctctcag
ttccatttcaatctcaggactgccagagacctcagcgtgtttgccccaaacatgacagag
atcatcaaggatgtgactcagtacagggaaggaatggcagatgacattattgtagaagcc
tgccaaggcccttctgtggctgatgtggtgttcctgttggatatggccatcaacggcagc
caggaggacctagatcatcttaaagcattcctgggcgaaagcatctctgccctggacata
aaggaaaattgcatgagggttggcctggtgacctatagcaatgagacaagggtgatcagc
tctctgagcacgggtaacaacaagacagaagtcttgcagcgcatacaggatctgtcccct
caagtagggcaggcctacactggagctgccctcagaaagactaggaaggaaatcttcagt
gcacagaggggcagtcggaagaaccaaggggtccctcagatcgctgtgctggtgacccac
agagcatcagaagacaacgtgaccaaggcagctgtcaacctccggcgggagggagtgacc
atctttaccatgggcatagagggggctaacccagacgagctggagaagatcgcatcccac
cctgcggagcagttcacctccaaactgggcaacttctctgagctggccacccacaaccag
acgttcctgaagaaactgcggaaccaaatcacacacacggtctctgtcttctcagaacgg
actgagaccctcaaatctgcctgtgtggacacagaggaagccgatatctatctactcatt
gatggttcagggagcacccagcccacagacttccatgaaatgaagaccttcctgtcagag
gtggtaggcatgttcaacattgctccccacaaggtgcgagtaggggccgtgcagtacgcc
gacacctgggacttggaatttgagatctctaagtatagtaacaagcctgacttgggaaag
gccatcgagaatatcaggcagatgggtgggaataccaacacaggggcggctttgaacttc
acactgaagctgttgcaaagagcaaagaaggaacgaggaagcaaagtgccgtgtcacctg
gtggttctgaccaatggcatgtctcgggacagcgtcctggggcctgcccataagctgaga
gaggaaaacatcagagtgcatgcgatcggtgtcaaggaagccaaccaaacgcagcttcgg
gagatagcgggagaggaaaagcgagtttactacgtccatgagttcgatgccttgaggaac
ataaggaaccaagtggttcaggagatctgtgctgaagaagcctgcagagacatgaaagcg
gacatcatgtttctggtggacagctctggcagcatcggacctgaaaacttcagcaagatg
aagatgtttatgaagaacctggtgagcaaatcccagatcggggctgaccgggtgcaaatt
ggcgtggtccagttcagccacgaaaacaaggaggagtttcagctcaacacgttcatgtct
caaagtgacatcgccaacgccattgaccgaatgactcacattggagaaacaaccttgacg
ggcagtgccctgacctttgtgtctcagtacttcagtcccgataagggggccaggcccaat
gtcaggaagttcctcattcttatcacggatggtgaggctcaggacatagtaagggaccca
gcgatcgcccttcgaaaagaaggtgtgattatctattctgtgggagtattcggctccaat
gtcacccagcttgaggagatcagtggaaagccagagatggttttctatgttgagaatttt
gacattctgcagcatatcgaagatgacctcgttctggggatctgcagtccccgtgaagaa
tgcaagcggattgaagttttggatgtggtgtttgtcatcgatagctccggcagcattgac
tatcaagaatataacatcatgaaggacttcatgattggcttggtgaaaaaagctgacgtg
ggcaagaatcaggtccggtttggagccctgaagtatgctgatgaccccgaagtgctgttt
tacctggatgaactaggcacgaagctggaggtagtttcagtgctccagaatgaccatccc
atgggtggaaatacttacaccgctgaggccctcgccttctccgatcacatgttcaccgaa
gcccggggcagccgtctgcacaagggagtcccccaagtcctcattgtgattaccgacggg
gaatctcatgacgcagagaagctcaacaccaccgccaaggccctgagagacaaaggcatt
ctcgtcctggctgtggggattgccggtgccaacagctgggagctcttggccatggcaggg
tcaagcgacaagtactactttgtagagaccttcggaggcctgaagggaatattttccgat
gtgtcagccagtgtctgtaactcttcaaaagttgattgtgaaattgaaaaggttgacctt
gtattcctcatggatggttcaaacagcatccatccggatgacttccagaagatgaagggg
tttttggtgtcggtcgttcaagacttcgatgtcagcctcaacagagtccgcataggcgtg
gcacagttcagcgacagctacaggtcagagtttctgctggggacgttcaccggggagagg
gagatatccacccagattgagggcatccagcagatctttggatacacccacatcggagat
gctctcaggaaggtgaagtattactttcagccagacatgggcagcaggatcaacgcaggt
accccccaggtgctgctggtcctcacagatggccggtcccaagacgaggtagctcaggcc
gccgaggagctgagacacaaaggtgtggacatctactcggtgggcatcggggatgtggat
gaccaggaattggtccagatcacggggaccgcggagaaaaaactgaccgtgcataacttc
gacgagctaaaaaaggtgaagaaaaggatcgttcggaacatctgtacctcaggtggtgag
agcaattgctttgtggatgtcgtggttggatttgacatctcaagcctgcagagagggcag
actctgctcgaaggtcagccttggatgggatcctacctccaagacctcttacgtgccatc
agctccctcaatggggtaagctgtgaagtgggcacagagactcaggtgagcatagctttt
caagtgacgaacgctatggaaagatacccttccaagtttgagatctacagtgagaacata
ctaagcagcctgcagggtgtgaccgtgaatggcccgtctcgcctcaacgccaacctgctg
agttctctgtgggatacgtttcagaataagtcagctgctcgtgggaaggtggtccttcta
ttttcagatggactggatgatggcattgagaaacttgaacagaagtctgatgaactcagg
aaggaaggcctgaatgccctcataaccattgctgtggatggagctgccgattccagtgac
ctggcggacctcctctacattgaatttgggaaaggatttgaatacaggacacagttcaca
attggaatgaggaaccttgggagtcagctgtcaaggcaactaatcaatgttgcagagagg
acctgctgctgtctgctctgcaagtgcacaggaggggacggcgccatgggggatccaggc
tcagcaggaaaaaagggacccccaggattcaaaggcagtgatggctacctcggagaggag
ggcattgctggagaaagaggagcctctgggccaatgggagagcaaggcacgaagggatgc
ttcggtgccaaagggcctaagggaaccagaggactcagtggagaagagggtgaagtcggg
gaagatgggcttgatggattagatggagaacagggtgaccatgggattcctggaagaaga
ggagaaaagggtgacgagggatctcagggaaacccaggcaggagaggggctgccggtgac
cgtggagcaaagggactgcgaggagatccgggaactcctggacgtgacagtagcatacaa
ggacccaagggcttgaaaggagaccttggaagacaaggcagaagaggctggccaggctct
cctggaacaccaggctcaagaagaaagatggtagttcatggccgaagaggacacataggc
ccacagggaaatccaggaaccccgggcccagatggacttgcaggttcgccaggacttaga
ggcccgcagggtccaagaggagaggtcggtgagaaaggagaaaaaggaagtctgggaatg
aaaggtcctcaggggcctccaggacccggaggacaagctgggagccaaggccatttggga
agccaaggaaacaaaggagaacctggagacctgggagaaaagggagctgctggctttcca
ggtcctcggggcctgcagggtgacgacggcagcccgggatatggtagcattggccgcaaa
gggacaaaggggcaagaaggattccccggagagagtggactgaagggtgatattggggac
cctggtgatccaggagaagctggtcccaagggagccagaggcaaaacggtatctgctggg
attccaggagagccggggtcccccggggagccaggaccccctggacggaagggtgtgaaa
ggggcccgaggactggcttcgttttccacatgtgacctcattcagtacgtgcgggaccac
agtcctggcagacatggaaaacctgagtgcccagtgcatccaactgagttggtgtttgtc
ctggaccagtcccgggatgtcacagagcaggactttgagcgaatgaaggggatgatggtc
tccctagttagggatgtcaaggttagggaggccaactgccccgtgggtgcccgcgttgcc
atcctagcctacaactcccacaccaggcacctcatccgcttctcagatgcctacaggaag
gaccagctgctcacggcgattaaagctcttccttatgagagatcctccgacagcagggag
attggcaaagccatgaggttcatctccaggaatgtcttcaagagaacccttccaggggct
catgtgagaagaatcgccacgttctttagcagtggtccatcggccgacgcccagaccatt
accacagccgccatggagttcagtgccctggacattgtacctgtggtgattgcgttcagc
aacgtgccctcggtcaagcgcgccttttcaattgatgacactggcacattccaagtcatt
gtggttccctccgggtctgatgaagggccagcgttagagagactccagcggtgcactttc
tgctatgatctatgcaagccggatgcttcgtgtgaccaagccaaaccaccccccattcag
tcctacctggacactgcattcctactggatggctctcggcacgtgggaagtgcagagttt
gaagacatgagagactttctagaggcactgctagatcacttcgaaatcacttcggagcca
gagacatctgtcactggagacagggtggccctgctgagccatgcccccctcgacttccta
cccaacacccagaggagtccggttagaactgagttcaacctaaccagctatagcagtaag
cgcctcatgaagagacacgtggatcaggcagtccagcagctgcatggagatgcttttctt
ggccatgccctcgggtgggcactggacaacgtctttttaaacacccccaatttgagacga
aacaaagtcatatttgtgatatctgctggggaaaccagccacctggatgcggaaacctta
aagaaagagtccctacgagccaaatgtcatgggtatgccctctttgtcttttccttgggc
cctgactgggatgacaaggaactggaagacctggccagccaccccgtagaccagcacttg
atccagcttggccgaattcataaacctgaccacggatacagtgtgaagtttgtgaagtct
tttataaactccatcaggcatgggataaacaagtatccaccggtcaacctcaaagccaag
tgcaacagactcggctctagggatctgaagccgcccccacgccagtttcgaagctttgtt
ccaggaccacagaaagccaacctcaaagaccacacagcagaggcagcaaagctctttcaa
gataaaaaacgcctttcaagtatgctgaaagggggcagagctactatttcaagtctttcc
agaagcacacgctatgcctttaaacaggggaaagaagcaataaaagccacttctaaactc
ggtaaacgaagtgcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (17)   
   RefSeq(nuc) (3)   
   GenBank (7)   
   EMBL (7)   
Protein domain (5)   
   Pfam (5)   
All databases (75)   

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