KEGG   Mus musculus (house mouse): 245886
Entry
245886            CDS       T01002                                 
Symbol
Ankrd27, D330003H11Rik, Varp
Name
(RefSeq) ankyrin repeat domain 27
  KO
K20175  ankyrin repeat domain-containing protein 27
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    245886 (Ankrd27)
Membrane trafficking [BR:mmu04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    245886 (Ankrd27)
 Others
  Rab GTPases of specific organelles
   Melanosome
    245886 (Ankrd27)
SSDB
Motif
Pfam: Ank Ank_2 Ank_4 Ank_3 Ank_5 VPS9 Ribonuc_red_sm EcoEI_R_C
Other DBs
NCBI-GeneID: 245886
NCBI-ProteinID: NP_663608
MGI: 2444103
Ensembl: ENSMUSG00000034867
UniProt: Q3UMR0
Position
7:35285652..35338662
AA seq 1048 aa
MALYDEDLLKNPFYLALQKWRPDLCSKVAQIHGIVLVPCRGSLPGSVQASCQFESYVLVP
TEGHFQTLDGKAVVIEGNRIKLGAGFACLLSVPILFEETFYNEKEESFSILCIAHPLERR
ETSEEPSAPADPFSLKTIEDVREFLGRHSEKFDKNIASFHRTFRECERKSLRHHIDSVNA
LYTKCLQQLLRDSHLKVLAKQEAQMNLMKQAVEMYVHHDIYDLIFKYVGTMEASEDAAFN
KITRSLQDLQQKDIGVKPEFSFNIPRAKRELGQLNKCTSPQQKLLCLRKVVQLMTQSPSQ
RVNLETMCADDLLSVLLYLLVKTEIPNWMANLSYIKNFRFSSSAKDELGYCLTSVEAAIE
YIRQGSLSTKTPDAEGFGDRLFLKQRMNLLSQMTSTPIDCLFKHIASGNQKEVERLLSQD
DQDKDAMQKMCHPLCSCEDCEKLISGRLNDPSVVTPFSRDDRGQTPLHVAALCGQASLID
FLVSKGAVVNATDYHGSTPLHLACQKGFQSVTLLLLHYKASTEVQDNNGNTPLHLACTYG
QEDCVKALVYYDVQACRLDIGNEKGDTALHIAARWGYEGIIETLLQNGAPTAVQNRLKET
PLKCALNSKILSIMEAHHLSSDRRPRPSEVPAQSPTRSVDSISQGSSTSSFSSISVSFRQ
EEVKKDYREVEKLLRAVADGDLEMVRYLLEWTEDDLDDVEDAISTVDLEFCHPLCQCPKC
APAQKLARISANGLSVNVTNQDGFSPLHMAALHGRTDLVPLLLKHGAYSGARNTSQAVPL
HLACQQGHFQVAKCLLDSNAKPNKKDLSGNTPLICACSAGHHEVAALLLQHGASINACNN
KGNTALHEAVMGRHTLVVELLLFYGASVDILNKRQYTAADCAEQDSKIMELLQVVPGCVA
SLDSVEEADHEGYVTVEIRRKWNPKMYNLPEEPLRRQFCLINPGGRFQERTSRETMGRDR
SVPDLAGRSLQEPEKQRVTGKQSDLSDLSRYQTSEEGNKGLPERPVSRQAAPGHRPMVRR
HTVNDAAILQVPEVTVHLTTHEASVPQS
NT seq 3147 nt   +upstreamnt  +downstreamnt
atggctctatatgatgaagatctcctgaaaaaccctttctacctggcccttcagaagtgg
cgccccgacttgtgcagcaaggtggcccagatccatggcattgtcctagtgccttgcaga
ggaagcctgcccggcagtgtgcaggcctcctgccagttcgagtcctatgttttggtaccc
acggaaggacactttcagaccttagatggaaaggctgtcgtcattgaaggaaacaggatt
aagctaggagcaggttttgcttgccttctctctgtgcccatcctctttgaggagactttc
tacaacgagaaagaggagagtttcagcattctctgcattgctcatcctttggagaggaga
gagacttcagaagaaccttcagcgcctgcagatcctttctccctgaaaaccatcgaagat
gtgagagaatttttgggaagacactcagagaaatttgacaagaacattgcctctttccac
cggacgttccgagaatgtgaaagaaagagcctccgccaccacatagactccgtaaatgct
ctctacaccaaatgcctccagcagcttctccgagactctcacctgaaggttcttgcaaag
caggaggcccagatgaacctgatgaagcaggccgtagagatgtatgtccatcacgatatt
tacgacctgatctttaaatacgtggggaccatggaggcgagcgaggatgccgcctttaac
aaaatcacgagaagccttcaagatctccagcagaaagacatcggcgtgaaacccgagttc
agcttcaacatccctcgggcaaagagagagctgggtcagttgaacaagtgtacgtcgcca
cagcagaagctgctgtgcctgaggaaggtggtccagctcatgacacaatctcccagccag
agagtgaacttggagaccatgtgtgccgatgatctcctctcggtcctgttatatctgctc
gtgaagacagagatccctaactggatggcaaatttgagctacatcaaaaacttcagattt
agcagctcggccaaagatgagctaggatactgcctgacctcagtcgaggctgcgattgaa
tacatccggcaaggaagtctctccacgaagacgcctgacgctgagggatttggcgacaga
ctatttctcaagcagcggatgaacttgctgtcccagatgacatcaacacccatcgactgc
ctgttcaagcacatcgcctctggtaaccaaaaggaagtggaaagacttctgagccaagat
gaccaggacaaagacgccatgcaaaagatgtgccacccactttgttcctgtgaggactgt
gagaagcttatctctgggaggctgaatgacccgtcagttgtcactcctttctccagagat
gacagaggtcaaacacccctccatgtggctgccctctgtggtcaggcatccctcattgac
ttcctggtctccaaaggtgccgtagtgaacgccacagactatcatgggtccaccccctta
catctggcatgtcagaaaggcttccaaagtgtgacgctgctgctgctgcactacaaggcc
agcactgaggttcaggacaacaacggcaacaccccgctgcacctggcctgcacctatggg
caggaggattgcgtgaaggccctggtctactatgatgtccaggcctgcagattggatatt
ggtaatgagaaaggagacacagccctgcacattgctgcacgctggggttacgagggcatc
atagagacactgctgcagaatggagcccccacagcagtccagaacagactgaaggaaaca
ccactcaagtgtgctctgaactcgaagattctgtctatcatggaagctcatcacctatcc
tctgacaggaggccaaggccttctgaggttcctgcacagtcccctacacgctctgtggat
tccatcagccagggctcctccacctccagcttttcttccatatcggtgagcttcaggcaa
gaagaggtcaaaaaggactacagggaggtagaaaagcttctaagggcagttgctgatggc
gatctagaaatggtacgataccttttggagtggacagaggatgacctagacgatgtggaa
gacgccatcagcacggtggatctcgaattctgtcaccccttatgccagtgtcccaagtgt
gctccagctcagaaactggccaggatttctgccaatgggcttagtgtgaatgtgaccaac
caggacggcttctctcccctgcacatggctgccctgcatggccgcacagacctcgtcccc
ctcctgctgaagcacggtgcttactcaggtgccagaaacacaagccaagccgtcccgctc
cacctggcctgccagcaggggcactttcaggtggcaaaatgtctcttagattccaatgca
aaacctaataaaaaggacctcagtgggaacacacccctcatttgtgcctgctctgccggc
caccatgaagtcgctgcgctgttgctacagcacggggcctccatcaatgcttgcaacaac
aaaggcaacacggccctgcatgaggctgtgatgggaaggcacaccctggtagtggagctg
cttctgttctacggggcgtcggttgacatcctgaacaagaggcagtacacggcggcggac
tgtgccgagcaggactcaaaaataatggagttgctgcaggtagtgccaggctgtgttgcg
tctctagacagcgtcgaggaggcagaccacgagggttacgtgactgttgagatcaggaga
aaatggaaccccaaaatgtacaacctgccagaggaacctcttaggagacagttttgcctc
attaacccggggggtcggttccaggagaggacatccagggagactatgggaagggataga
agtgtgcccgatcttgcaggacgttctcttcaggagccagagaagcaaagagtcaccgga
aagcagagtgacctgtcagacctgagcaggtatcagacctctgaggaaggaaacaagggg
ctcccggagaggcccgtgtcgagacaggctgctccaggacaccggccgatggtccgcaga
cacacagtcaatgacgcagccatactccaggtcccagaggtgactgtccacctcaccacc
cacgaggcgagtgttcctcagtcttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (34)   
   RefSeq(nuc) (6)   
   GenBank (14)   
   EMBL (14)   
Protein domain (8)   
   Pfam (8)   
All databases (86)   

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