KEGG   Mus musculus (house mouse): 268973
Entry
268973            CDS       T01002                                 
Symbol
Nlrc4, 9530011P19Rik, CLAN, CLAN1, CLANA, CLANB, CLANC, CLAND, Card12, IPAF
Name
(RefSeq) NLR family, CARD domain containing 4
  KO
K12805  NLR family CARD domain-containing protein 4
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04621  NOD-like receptor signaling pathway
mmu05132  Salmonella infection
mmu05134  Legionellosis
mmu05135  Yersinia infection
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    268973 (Nlrc4)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    268973 (Nlrc4)
   05135 Yersinia infection
    268973 (Nlrc4)
   05134 Legionellosis
    268973 (Nlrc4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:mmu04054]
    268973 (Nlrc4)
Pattern recognition receptors [BR:mmu04054]
 Cytoplasmic pattern recognition receptors
  NOD-like receptors
   268973 (Nlrc4)
SSDB
Motif
Pfam: NLRC4_HD NACHT CARD AAA_16 nSTAND3 AAA_29
Other DBs
NCBI-GeneID: 268973
NCBI-ProteinID: NP_001028539
MGI: 3036243
Ensembl: ENSMUSG00000039193
UniProt: Q3UP24
Structure
Position
17:complement(74733254..74766140)
AA seq 1024 aa
MNFIRNNRRALIQRMGLTVTKQICDDLFALNVLNNQEANVIYCEPLEQEAARKIIHMTMQ
KGSAACNLFLKSLENWDYFVYQDLTGQNLSYQVTEEDLNVLAQNLKDLYNSPAFLNFYPL
GEDIDIIFNLEKTFTEPIMWKKDHRHHRVEQLTLGSLLEALKSPCLIEGESGKGKSTLLQ
RIAMLWASGGCRALKGFRLVFFIHLRSARGGLFETLYDQLLNIPDFISKPTFKALLLKLH
KEVLFLLDGYNEFHPQNCPEIEALIKENHRFKNMVIVTTTTECLRHIRHVGALTAEVGDM
TEDSAKDLIEAVLVPDQVERLWAQIQESRCLRNLMKTPLFVVITCAIQMGRQEFQAHTQT
MLFQTFYDLLIQKNSHRYRGGASGDFARSLDYCGDLALEGVFAHKFDFEPEHGSSMNEDV
LVTIGLLCKYTAQRLKPTYKFFHKSFQEYTAGRRLSSLLTSKEPEEVSKGNSYLNKMVSI
SDITSLYGNLLLYTCGSSTEATRAVMRHLAMVYQHGSLQGLSVTKRPLWRQESIQSLRNT
TEQDVLKAINVNSFVECGINLFSESMSKSDLSQEFEAFFQGKSLYINSENIPDYLFDFFE
YLPNCASALDFVKLDFYERATESQDKAEENVPGVHTEGPSETYIPPRAVSLFFNWKQEFK
TLEVTLRDINKLNKQDIKYLGKIFSSATNLRLHIKRCAAMAGRLSSVLRTCKNMHTLMVE
ASPLTTDDEQYITSVTGLQNLSIHRLHTQQLPGGLIDSLGNLKNLERLILDDIRMNEEDA
KNLAEGLRSLKKMRLLHLTHLSDIGEGMDYIVKSLSEESCDLQEMKLVACCLTANSVKVL
AQNLHNLIKLSILDISENYLEKDGNEALQELIGRLGVLGELTTLMLPWCWDVHTSLPKLL
KQLEGTPGLAKLGLKNWRLRDEEIKSLGEFLEMNPLRDLQQLDLAGHCVSSDGWLYFMNV
FENLKQLVFFDFSTEEFLPDAALVRKLSQVLSKLTLLQEVKLTGWEFDDYDISAIKGTFK
LVTA
NT seq 3075 nt   +upstreamnt  +downstreamnt
atgaactttataaggaacaacagacgagcccttattcaaaggatgggcttaacagttacc
aagcaaatctgcgatgacctctttgcattgaacgttctcaacaatcaagaagctaatgtc
atttactgtgagcccttggagcaggaagccgcccgaaagatcatccatatgactatgcag
aagggctcagcggcctgcaacctctttcttaagagtcttgaaaactgggactattttgtg
tatcaggacttaactggacaaaatctttcttatcaggtcacagaagaagacctgaatgtt
ttggcccagaatttaaaggacttgtacaacagccctgcttttctgaacttctaccccctg
ggtgaagatatcgacataatttttaatctggagaaaaccttcacagaacctatcatgtgg
aagaaggaccatcgtcatcaccgtgtggagcagctgactttgggcagcctgctcgaggct
ctgaagagcccctgcctgattgaaggcgagtctggcaaagggaagtccaccctgctgcag
agaatcgctatgctctgggcctctgggggctgcagggctctgaaggggttcagattagtc
ttcttcatccacctgagaagcgccagggggggactattcgaaacactgtacgatcagctc
ctgaacatacccgacttcatcagcaagccgaccttcaaggctctgctgctgaagctacac
aaggaggtcctctttcttctcgatggttacaatgaattccatccccagaactgcccagaa
attgaagccctgataaaggaaaaccatcgcttcaagaacatggtcattgtcaccaccacc
acggagtgcctgaggcatatcagacatgttggcgccctgactgcggaggtgggagatatg
accgaagacagtgccaaagatctcatcgaggcagtgctggtacctgatcaggttgaacgc
ctgtgggcccaaatccaggagtccaggtgcctgagaaatctgatgaagacccctctcttc
gtggtgatcacctgtgcaattcagatgggcagacaggaattccaagctcacacccaaacc
atgctgttccaaaccttctacgacctcctgatacagaaaaacagccacagatatagaggt
ggagcttcaggtgattttgccaggagcctagactactgtggagacctggccctagaaggt
gtgttcgcccacaaatttgattttgaacccgagcatgggtccagcatgaacgaggacgtc
ctggtgacaatagggctcctctgtaagtacacagctcagaggctgaagcccacgtataaa
ttctttcataaatcatttcaggagtacacggcaggtcggagactcagcagtttgctgacg
tccaaagagccagaggaggtgagcaaagggaacagctacttaaacaaaatggtttccatc
tctgacatcacatccctatatggcaatctgctcctctacacgtgtgggtcgtccacagaa
gcaaccagggcggtcatgaggcaccttgcaatggtttatcagcacggcagcctacaagga
ctttcagtcaccaagaggcctctctggaggcaggaatcaatccagagtctgagaaatacc
actgagcaagatgttctgaaagccatcaatgtaaattccttcgtagagtgtggcatcaat
ttgttctcagagagtatgtctaaatcagacctgagccaagaatttgaagctttctttcaa
ggtaaaagtttatacatcaactcagagaacatccctgactatttatttgacttctttgaa
tacttgcctaattgtgcaagcgcattggacttcgtgaagttggatttctatgaaagagct
acagagtcacaggacaaggcagaagagaatgtccctggagttcacacagaagggccctca
gaaacctacattccccccagggctgtgtctttgttcttcaactggaagcaggaattcaag
actctagaggtcacactccgagatattaacaagttgaataagcaagatatcaaatatctg
gggaagatattcagctctgccaccaacctccggctgcatatcaagagatgtgcagccatg
gctggaagactcagctcagtcctcagaacctgcaagaacatgcataccctcatggtggaa
gccagtcccctcaccacggatgacgaacagtacatcacatctgtgacaggcctccagaac
ttaagtattcaccgcttgcacactcaacagctgccaggtggtctgattgacagcttgggt
aatctgaagaacctcgagagactcatactggatgacatcaggatgaacgaggaagatgct
aaaaacctagccgaaggcctacgaagcctgaagaagatgcgtttactccatttgactcat
ttgtctgacattggggaggggatggactacatagtcaagtctctctcagaagaatcctgt
gatctccaagagatgaagttggtggcctgctgtctgactgcaaactctgtgaaagttcta
gcacagaatcttcacaatttgatcaagctgagcattcttgatatatcagaaaattacctg
gaaaaggatgggaatgaagctctacaggaactgatcggcaggcttggcgttctgggagag
ctcactacattgatgctgccttggtgctgggatgtgcacaccagcctgcccaagctgttg
aagcagttggaggggaccccaggacttgccaaacttggattgaaaaactggagactcaga
gacgaagagattaaaagtttaggtgaatttctggagatgaatcctctgagagacttgcag
cagttggatttagcggggcactgtgtgagcagtgacggatggctttacttcatgaatgtg
tttgagaatctgaagcagttagtgttttttgactttagcactgaggagttcttaccggat
gcagcactggtgaggaaacttagtcaagtgttatccaagttaactcttctgcaagaggta
aagctcacgggctgggagtttgatgactatgatattagcgctattaaaggcacctttaaa
ctagtgactgcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (16)   
   RefSeq(nuc) (4)   
   GenBank (6)   
   EMBL (6)   
3D Structure (4)   
   PDB (4)   
Protein domain (6)   
   Pfam (6)   
All databases (62)   

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