KEGG   Mus musculus (house mouse): 277250
Entry
277250            CDS       T01002                                 
Symbol
Kdm3b, 5830462I21Rik, JHDM2B, Jmjd1b, mKIAA1082
Name
(RefSeq) KDM3B lysine (K)-specific demethylase 3B
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04714  Thermogenesis
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    277250 (Kdm3b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    277250 (Kdm3b)
Enzymes [BR:mmu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     277250 (Kdm3b)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    277250 (Kdm3b)
SSDB
Motif
Pfam: JmjC DUF3000 Cupin_2 C1_2
Other DBs
NCBI-GeneID: 277250
NCBI-ProteinID: NP_001074725
MGI: 1923356
Ensembl: ENSMUSG00000038773
UniProt: Q6ZPY7
Position
18:34910061..34972423
AA seq 1762 aa
MADAAASPVGKRLLLLFADPTASASASAPTAAAVVSGDPGPALRTRAWRAGTVRAMSGAV
PQDLAIFVEFDGCNWKQHSWVKVHAEDVLALLLEGSLVWAPRKDPVLLQGTRVPVAQWPA
LTFTPLVDKLGLGSVVPVEYLVDRELRFLSDANGMHLFQMGTDVQNQILLEHAALRETVN
ALISDQKLQEIFSRGPYSVQGHRVKVYQPEGEEVWLCGVVSRQDSVTRLMEVSITETGEV
KSVDPRLTHVMLMDSSTPQSEGGTIKAVKSSKGKKKRESIEGRDGRRRKSASDSGCDPAT
KKLKGDRGEVDSNGSDGGEASRGPWKGGNASGEPGLEQRAKQPPSTFVPQINRNIRFATY
TKENGRTLVVQDEPVGGDTPVPFTPYASATGQTPLAPEVGGAENKEAGKTLEQVSQGMVA
SAAVVTTASSTPTTVRISDTGLASGTGPEKQKGSWSQASGENSRNSSLASSGFGVSLSSL
SQPLTFGSGRSQSNGVLATDNKPLGFSFSCSSASESQKDSDLSKNLFFQCMSQNVPSTNY
LSRVSESVADDSSSRDSFTQSLESLTSGLCKGRSVLGADTQPGPKAGSSVDRKVPAESMP
TLTPAFPRSLLNTRTPENHENLFLQPPKLSREEPSNPFLAFVEKVEHSPFSSFVSQASGS
SSSATSVTSKATASWPESHSSAESAPLAKKKPLFITTDSSKLVSGVLGSALSTGSPSLSA
VGNGRSSSPTNSLTQPIEMPTLSSSPTEERPTVGPGQQDNPLLKTFSTVFGRHSGSFLSA
PAEFAQENKAPFEAVKRFSLDERSLACRQDSDSSTNSDLSDLSDSEEQLQAKSGLKGIPE
HLMGKLGPNGERSAELLLGKGKGKQAPKGRPRTAPLKVGQSVLKDVSKVRKLKQSGEPFL
QDGSCINVAPHLHKCRECRLERYRKFKEQEQDDSTVACRFFHFRRLVFTRKGVLRVEGFL
SPQQSDPDAMNLWIPSSSLAEGIDLETSKYILANVGDQFCQLVMSEKEAMMMVEPHQKVA
WKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLRKSRPRSETEEMGDEEVFSW
LKCAKGQSHEPENLMPTQIIPGTALYNIGDMVHAARGKWGIKANCPCISRQSKSVLRPAV
TNGISQLPSVTPSASSGNETTFSSGGGAAAVTNPEPDQVPKGAGTDGRSEEPLKAEGSAS
NSNSELKAIRPPCPDTAPPSSALHWLADLATQKAKEETKDAGSLRSVLNKESHSPFGLDS
FNSTAKVSPLTPKLFNSLLLGPTASNSKTEGSSLRDLLHSGPGKLPQTPLDTGIPFPPVF
SSSSAVAKSKASLPDFLDHIIASVVENKKTSDPSKRSCNLTDTQKEVKEMAMGLNVLDPH
TSHSWLCDGRLLCLHDPSNKNNWKIFRECWKQGQPVLVSGVHKKLKSELWKPEAFSQEFG
DQDVDLVNCRNCAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMP
TRFEDLMENLPLPEYTKRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNL
HLDVSDAVNVMVYVGIPVGEGAHDEEVLKTIDEGDADEVTKQRIHDGKEKPGALWHIYAA
KDAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDQILRKRLFEEYGVQGWAIVQFLGD
AVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNI
IYHAVKDAVGTLKAHESKLARS
NT seq 5289 nt   +upstreamnt  +downstreamnt
atggcggacgcggcggcctccccggtgggcaagcggctgttgcttctgttcgcggaccct
acggcctcagcttcggcctcggcccccacggcggcggcggtagtgagcggagatcctggg
cctgcgctgcgcactcgggcctggagggccggcacggtgcgggccatgagcggggcggtg
ccccaggacctagcgatctttgtggagtttgacggctgtaactggaagcagcactcctgg
gttaaggttcacgctgaagacgtgcttgcgcttctgctggaaggctcacttgtttgggct
ccccggaaggaccccgtccttctgcagggcacccgagtcccagttgcccagtggccagcc
ctgactttcacccccctagtagataagctggggttggggtctgtggtgccagttgaatac
cttgtggatcgagagcttcgtttcctgtcggatgctaatgggatgcatctgttccagatg
ggaacagatgttcaaaatcagattcttttagaacatgctgcattaagagagacagttaat
gctttgatcagtgaccaaaagctacaagagattttcagccgaggtccctatagtgtccag
ggccacagagtcaaggtctaccaacccgaaggagaggaagtatggctctgtggtgttgtg
agccgtcaggactcagtcacccgtcttatggaagtgtctataactgagactggtgaggtc
aagtcagtagatcccagactcacccacgtgatgctgatggacagctcgacaccacagagt
gaggggggtaccataaaagcagtaaaatcttccaaaggaaagaagaagagagagagcata
gaggggagagatggccggaggaggaaaagtgcttcggactctgggtgtgaccctgctaca
aagaaattaaaaggagacaggggtgaagtagacagtaatgggagtgatggaggtgaggca
agccgagggccctggaaaggaggtaatgccagtggagagccagggctggagcagagagcc
aagcagccaccgtctacatttgttccccagattaaccgcaacattcgctttgccacttac
accaaagaaaacggcagaactctggtggtacaggatgagcctgtaggtggggatacgccc
gtccctttcactccgtatgcttcagccacaggtcagacacctttggccccagaggtaggt
ggagctgaaaacaaagaggcgggaaaaacgctggaacaagttagccagggcatggtggct
tcagcagctgtagtcactaccgccagctccaccccaaccacggtgaggatctcagacact
ggccttgcatcagggactgggccggaaaaacagaaaggcagctggtcgcaggcctcagga
gagaattcaagaaattctagtctggcctcttctggatttggagtgtctctctcaagtttg
tcacaaccattgacttttggaagtggacggagccagtccaatggagttttagccacagat
aacaagcctttgggcttctctttcagctgcagctctgcatcagagtctcagaaggactcc
gatctctccaagaacttgttttttcaatgcatgtcccaaaatgtacccagcactaactac
ctgagcagggtttcagagagcgtggccgatgactcctcgagcagggattccttcacacaa
agcctcgagagcctgacttcaggcctgtgtaaaggcagatctgttctcggagcagatact
cagccaggtcccaaggccggcagctctgtggaccgaaaagtgcctgcagagtccatgccc
acccttactccagccttcccacggagtctcctaaatacccgcaccccagagaatcatgaa
aatctatttttacagcccccgaaactgtcccgagaagaaccttctaaccctttcctggcg
tttgtggagaaagtggaacacagccctttcagcagctttgtgtctcaggcatcaggtagc
tcttcctctgctacctctgtcacctcaaaggcaacagccagctggcctgagtctcactcc
tctgcagagtctgcacctttagcaaagaaaaagcccctctttattacaactgactcctcc
aagctggtatctggtgttctgggctccgctctcagcactgggagtccgagtctctctgca
gtggggaatggccgctccagctcgcccaccaacagcctcacccaacctattgagatgcct
actctctcctccagtcccacagaagagaggccaactgtggggcctggccagcaggacaat
ccgctcctcaaaaccttcagtaccgtctttggcaggcactcaggcagctttctctccgcc
ccagcagagtttgcacaggagaacaaagcaccttttgaagctgtaaaaaggttctcattg
gatgagcgaagcttggcttgcagacaggattcggactccagcaccaacagtgacctgtca
gatctgagcgactcagaggagcagctgcaggccaagagtggcctgaaggggattccagag
cacctgatggggaagctaggccccaacggggagcgtagtgctgagctgctactgggcaag
ggcaaagggaagcaggccccaaagggccggccccggactgctcccctgaaagttggccag
tcggtgctgaaggacgtgagtaaagtaaggaagctgaagcagtctggagagcccttcctg
caggacggctcctgcatcaacgtggcgcctcacttgcacaagtgccgagagtgccgcctg
gagaggtaccgcaagtttaaggaacaggagcaagatgattctactgtagcctgccgcttc
tttcacttccggaggttggtcttcactcgaaagggggtgctccgtgtggagggatttctg
agcccccagcagagtgacccggatgccatgaacctgtggatcccctcttcctccctagca
gaaggaatagacctagaaacctcaaaatacatcttggccaatgttggggaccagttctgt
cagcttgtaatgtctgagaaggaggccatgatgatggtggagccacaccagaaagtggcg
tggaagcgagcagtgcgtggagttcgggagatgtgtgatgtgtgtgagacaaccctcttc
aatatccactgggtctgtcggaaatgtggatttggggtctgccttgactgttaccggctc
aggaaaagccgtccaaggagtgagacagaagaaatgggggatgaggaagttttctcctgg
ctgaagtgtgcaaaggggcagtcccacgaaccagaaaacctcatgcccacccagatcatc
cctggcacagcgctttacaatattggagacatggtacacgctgcccggggaaagtggggg
attaaagctaactgcccttgtataagtcggcaaagcaaatctgttttgagacctgctgtc
accaatgggatatcacagcttcccagtgtaacccctagtgcctcttctggaaacgaaact
accttctcaagcggaggcggagctgcagcggtcacaaatccagagccagaccaagttccc
aaaggtgctggcactgacggcagatctgaggagcccctaaaagcagaaggttctgcgtca
aatagcaatagtgaactaaaagccatcaggcccccgtgcccggacacagcccctccttcc
tctgctctgcattggttggccgacttagcaactcagaaggcgaaagaagaaacgaaagat
gcagggtccctgcggtcggtgctcaataaggagtctcattcaccctttgggctggactca
ttcaactctactgcaaaagtctctccattgactccaaagctttttaacagcctgttactg
ggtcccactgcctccaacagcaaaactgagggttctagtcttcgagacctccttcactct
gggcccggaaagcttcctcaaacccccctggatacaggcatacccttcccccctgttttc
tcttcatcctcagcagtagcgaagagcaaagccagcctacccgacttcctcgaccacatc
atcgcctcagtggtagaaaacaagaaaacctcagatccctcaaagcggtcctgcaacctg
accgacacccagaaggaggtgaaggagatggcgatggggctgaatgtgctcgacccccac
acgtctcactcctggctctgcgacgggcgccttctgtgtctccatgaccccagcaacaaa
aataactggaagatcttccgagagtgttggaaacaaggccagccagtgctagtttcaggg
gtgcataaaaagctcaagtctgaactctggaagccggaagccttcagccaggagtttgga
gaccaggacgtggacttggtgaactgcaggaattgtgctatcatttccgatgttaaagtt
cgagatttctgggatggctttgagatcatatgcaagagactacggtcagaagatgggcag
ccaatggtgctcaaactcaaagactggccccctggggaagatttccgggacatgatgcct
acaaggtttgaagatctgatggagaatcttcctcttccagaatataccaaacgagatggc
aggctcaatctggcttctaggctacccagctactttgtaaggcctgatctgggccccaag
atgtacaacgcctatggtttgataacagcagaagacagaagagttggtacaacaaatctt
catttagatgtgtcagacgctgttaatgtgatggtgtatgttgggatccctgtcggggag
ggtgctcacgatgaagaagtactcaaaactattgatgagggagatgctgatgaggtgacc
aagcagaggattcatgatggcaaagagaagccaggagctttatggcacatttatgcagcg
aaggatgcagagaagatccgagagctgctccggaaggttggagaagagcaaggccaagag
aatcctccagatcatgacccaattcatgaccaaagttggtatctggaccagatcctccga
aagcgactctttgaagagtatggtgtgcaaggctgggccattgtgcagttcctgggtgac
gctgtcttcatccctgctggagccccgcaccaggttcacaatctgtacagttgcataaag
gtcgcagaagattttgtatctccagagcacgtgaagcactgtttccgcctgactcaggaa
ttcaggcatctctccaacactcacaccaatcatgaggataagctacaggtgaagaacatc
atataccacgcagtgaaagacgctgtcggcactctcaaggcccacgaatccaagctcgca
aggtcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (30)   
   RefSeq(nuc) (2)   
   GenBank (14)   
   EMBL (14)   
Protein domain (4)   
   Pfam (4)   
All databases (67)   

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