KEGG   Mus musculus (house mouse): 319555
Entry
319555            CDS       T01002                                 
Symbol
Nwd1, A230063L24Rik
Name
(RefSeq) NACHT and WD repeat domain containing 1
  KO
K24734  NACHT domain- and WD repeat-containing protein
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:mmu04990]
    319555 (Nwd1)
Domain-containing proteins not elsewhere classified [BR:mmu04990]
 WD40 repeat (WDR) domain-containing proteins
  Other WDR domain-containing proteins
   319555 (Nwd1)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 NACHT AAA_16 AAA_22 CNH nSTAND1 ATPase_2 RNA_helicase AAA DUF4062 RuvB_N IstB_IS21 nSTAND3 AAA_28
Other DBs
NCBI-GeneID: 319555
NCBI-ProteinID: NP_795914
MGI: 2442268
Ensembl: ENSMUSG00000048148
UniProt: E0CX99
Position
8:73372865..73443508
AA seq 1521 aa
MDTEREALQCTAYPEVQSFCQRHGLAFEVVDLRWGIPNTQATDYLTTELCLEELERCQKT
SIGPAFVALLGDQYGPCPVPRRIEEKEWEALRAQLTSRPRDLELVTRHFQRDDNTIPPTY
VLQPSGSLVVPGPEEATLTSVLRGGAQEAWRLGLISQEQWMCYHRSVIEWEIELGLLSSA
RGDQGATVFLRDVQDLNKHILDDCSLKMVDRLVDGCLDTNAQSLLSGLKGRILDAQPGAL
KSHHLSWSRDLVNPKNKAHARYLKQLSEQFVARTNHQVLEQLRELELARQELGWLYQEIR
HHLWQSTESTKVFCGHQELLAQLRQQLRQDESRTHTPLVLFGPPGIGKTSLMCKLAQQVP
ELLGHKTVVVLRLLGTSKLSLDARSLLRSLSFQVCLAYGLPLPPAQVLEAHSRVGHFFHT
LLHTVSQRNFESLVLLLDSVDDLDSICHSPRVSWLPLKCPPRVHLILSTCSGQQVLHNLQ
QTLKDPSTYWEVKALSGSQGQEFIQLLLAAEKRMLSPGQRDVLWASLPECGHPGRLRLAF
EEARKWASFTVPVPLATTAEEATHQLCIRLEETHGALLVAHVLGYIVSSRYGLSEAELKD
VLSLDDEVLQAVYRDWTPPSKELLRFPPLLWVRLRRDLGHCLVRRPVDGCMLLAIAHRQL
SQVIQVRYLSGPERAKRHGVLAEFFSGAWSQGIKKLITLPLVGKPLNLDRKVAPQPLWFS
STVANLRKLTELPFHLLHAGRLEELKQEVLGNMSWISCRGISGGIEVLLDDFDMCAPHMN
SPEVDLVREAIQLCGPAVELRGLEKSVLYTELLARLLFFAASHPAMIGQLCQQAQSWFRA
CPYPMLVPLAGFLQPPGGPLRATLTGCHKGITAIAWSLEEKLLVVGTQDGAMVVWDVEEQ
QVVHVLMGHTAEVKCVRVFAQGTLAISASKDHTLRLWSLLSGQEKVTILDGGSQNPTEPQ
SWDLHVDERNNVVYSTSGARINMWNLETSKLVFCITGDVSDPWVCVALLAAQGLLLALSK
GGQVSLWSSAMGKLQEKHQLSSIKEETPTCAVSIQSRARLVAGFSSGSIALVSAGEDRLL
EKLPEAVGFLVVSEDDSLLVAGFGRFVRIFLADSQGFHRFMASDLEHEDMVETAVLGPEN
NLIITGSRDALIQVWDLKSTKKLQSPTPFLDRTGLAAVSHHGSFVYFPKVGDKNKVTIWD
LAEGEEQDCLDTSNEVRCLEVAEQAKLLFTGLVSGIVLVFPLNSRQDVLCIPPPEARKAV
NCMSLSKSENRLAIAYDNIVLVLDISPGDPCPAIEGPTYTFYTQLPETIVSVAVLADYRV
VYGMSDGSLFLYDCACSKVFPLEAHGSRVSCVEVSHSEQLAVSGAEDALLCLWDLQACRG
MFEMSYENSCCRGVRCACFSRDDKHVFAGMEDRSVTAWSTVDGTLLAVQFVHAVINRIIP
TSNGFMAPTSHGYLIRERFQCPSVRASQQDPLKNFKKAVWLVKTRQREELAAAEASQDAE
PVAVEGKESKSNKRSQVCLIL
NT seq 4566 nt   +upstreamnt  +downstreamnt
atggacacagagcgagaagccctgcagtgcacagcctaccctgaggttcagagcttctgc
caaaggcacggcttggcgtttgaggtggttgatctgaggtggggtattccgaatacgcag
gccactgactacctgaccacggaactctgcttagaagaactggagcgctgtcagaaaaca
tccataggaccagcttttgtggccctcctgggtgaccagtacggcccctgcccggttccc
cggaggattgaggaaaaggagtgggaggcactaagagctcagctgacctccaggcctcga
gatctggagctggtgaccagacatttccagagagacgacaacaccattcctccaacctac
gtcttgcagccttcaggctcactggtggtcccagggcctgaggaggccaccttaacctct
gtcctgagaggtggagcccaggaggcctggaggctaggcctcatcagccaggagcaatgg
atgtgctatcaccgatcagttattgagtgggagatcgagcttggcctactgagctcagca
agaggggaccagggagctaccgtcttcctgagagatgtacaggacctcaataaacacatc
ttggatgattgctctctgaagatggtggatcggctggtagatggctgcctggataccaat
gcccagagtcttctcagtggtcttaaagggcgcatactagatgctcagcctggagcccta
aagtcccaccacctgtcctggagccgagacctggtcaaccccaagaacaaggctcacgct
cgttacctaaagcagttgagcgagcagttcgtggccaggaccaaccatcaggtcctggag
cagcttcgagagctggagttggccagacaggagctgggttggctctaccaagagatccgc
caccacctctggcagagcacagagtctaccaaggtcttctgcggccaccaggagctcctg
gcccagctcaggcagcagctcagacaggatgagagccggacacatactcccttggttctc
tttggaccaccaggcatcgggaagacctctctcatgtgcaagctagcccagcaggtacca
gagctacttggccacaagacagtggttgtcctgaggctgctagggacatcaaagctgagc
ctggatgcccgcagcctcctcaggagcctgtccttccaagtgtgcttggcatatgggctg
ccactgcccccagcccaggtcctggaggcccacagcagggtgggccatttcttccatact
ctcctccacaccgtgtcacagaggaactttgagtccctggtgttgctcctggactccgtg
gatgacctggactccatatgccattctccgagggtctcttggctgcccctcaagtgtcct
ccaagggtgcacctcatcctctctacatgctcaggccagcaggttttacataacctgcaa
cagaccctcaaggaccccagcacctactgggaggtgaaggccctgtctggaagtcaaggc
caggagttcatacagctgctgctggctgcagagaagaggatgctgagcccgggtcagaga
gatgtcctctgggccagcctcccagagtgtggccacccagggaggctaaggctggccttt
gaggaggcccggaagtgggcctccttcactgtgccagtgcccttggccactacagcagag
gaagccacacaccagctctgtatacgcctggaggagacacatggggcactgctggtggct
catgtactgggctatattgtgtcttccaggtacggtctctcagaagcagagctgaaggat
gtgttgtctttggatgatgaagtcttgcaggctgtgtaccgggactggacgccacctagc
aaagagctgctgcgcttcccgcccctgctgtgggtgcggctccgccgggacctgggacac
tgcctagtcaggaggcccgtggatggctgcatgctactggccattgcacacagacagctg
tcccaggtaatccaagttcgatatctgtctgggcctgagagagccaagaggcatggcgtg
ctagctgaattcttctctggagcctggagccaggggatcaagaaacttatcaccctgccg
cttgtagggaagcccctgaacctggaccgcaaggtggccccacagccactgtggttctca
agcacagtggccaacctgaggaagctgaccgaactgcccttccatctgctgcatgcaggc
cgcttggaggagttgaagcaggaggttctggggaacatgagttggatctcatgtcggggc
atctctggaggcattgaggtcctgctggatgattttgacatgtgtgcccctcacatgaac
tctcctgaggttgatctggttagagaagccatccagctgtgtggccctgctgtggagctc
cggggcctggagaagagcgtcctatacaccgagctcctggccagactccttttctttgct
gcatcacatccagcaatgatcggacaactgtgccaacaagcccagagctggttccgtgcc
tgcccctacccaatgctggtgcccctggcaggattcctgcagccacctggtggacctctt
cgagccactcttactgggtgtcacaaaggcatcaccgccatagcatggagcctggaggag
aaactcctggtggtgggcacccaggatggtgccatggtcgtgtgggacgtggaggaacaa
caggtggtacacgttctaatgggacacacagctgaagtgaagtgtgtgcgagtgtttgcc
caagggactcttgccatctctgcatcaaaggaccataccctgcgtctgtggagtctgctt
tccggccaggagaaagtcaccattttggatggagggtcacaaaatcccacagagccccag
agttgggaccttcatgtggatgagagaaacaatgttgtatactcgacatctggtgcaagg
atcaacatgtggaatctggaaacttcgaagctggttttctgtatcacaggagatgtgtct
gatccctgggtctgtgtggctttgttggctgcccagggtttgctgcttgccctgtccaag
ggtggccaggtcagtctgtggagctcagccatgggaaaactgcaggagaaacaccagtta
tccagcatcaaagaagagacacccacctgtgccgtctccatccagtcccgggcaaggctg
gtcgctggcttcagcagtggctccattgccctggtctccgctggagaagacaggctgctg
gagaagctcccagaagctgtggggttcctggtggtttctgaagacgattcccttcttgtg
gcaggctttggaagatttgtgcggattttcttggctgactcgcaaggcttccaccggttc
atggcttcggatctggaacacgaggacatggtggagacagcagtcttgggtcctgagaac
aatctgatcatcacagggtcccgggatgcacttatccaggtctgggatctcaagtccact
aagaagctgcagtctccgactccatttctggaccgcaccggcctcgctgcagtgtcccac
catggcagctttgtctacttccctaaggttggggacaaaaacaaagtcacaatttgggac
ttggcagaaggtgaggagcaagattgcctggacacgtccaatgaggtccgctgtctggag
gtggccgagcaggccaagctcctcttcacaggcctggtttctgggatcgtgcttgtgttc
cccctgaattccaggcaagatgtactgtgcatccccccacctgaggcacgcaaagctgtc
aactgcatgtccctgagcaagagtgagaatcgtctggccattgcctatgacaacattgtc
ctggtgcttgacatcagccctggggacccatgtccggccattgaaggccccacctacacc
ttttacacccagctgcctgagaccatagtgagtgtggctgtcctggctgactatcgtgtg
gtctacggcatgagcgatggcagcctcttcctgtacgactgtgcatgctctaaagtgttc
cctctggaggcccatgggagcagggtgagctgtgtagaggtcagccacagtgagcagcta
gcagtgagcggggctgaagatgcactgctatgcctctgggacctgcaggcttgcaggggg
atgttcgagatgagctatgagaactcctgctgcagaggggtgcggtgtgcctgcttctcc
agggatgacaagcatgtatttgcaggcatggaggaccgctctgtcactgcctggagcacg
gtggatggcactcttttggctgtccagtttgttcatgctgtgatcaaccgaatcatccct
acctccaatggcttcatggcccccacaagccacggctatctcatccgtgagcgcttccag
tgcccgtcagtcagagcctcccagcaagaccctctcaagaacttcaagaaggcagtgtgg
ctggtaaagaccaggcagagggaagagctggctgcagcagaagcctcccaggatgcagaa
ccagtggccgtagagggaaaggaatcaaagtcaaataaacgctcacaggtctgcctcata
ctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (13)   
   UniProt (1)   
   RefSeq(pep) (12)   
DNA sequence (35)   
   RefSeq(nuc) (17)   
   GenBank (9)   
   EMBL (9)   
Protein domain (16)   
   Pfam (16)   
All databases (106)   

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