KEGG   Mus musculus (house mouse): 327987
Entry
327987            CDS       T01002                                 
Symbol
Med13, 1110067M05Rik, D030023K18, Thrap1, Trap240
Name
(RefSeq) mediator complex subunit 13
  KO
K15164  mediator of RNA polymerase II transcription subunit 13
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04919  Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    327987 (Med13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    327987 (Med13)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   Mediator complex
    CDK-module
     327987 (Med13)
SSDB
Motif
Pfam: Med13_C MID_MedPIWI
Other DBs
NCBI-GeneID: 327987
NCBI-ProteinID: NP_001074400
MGI: 3029632
Ensembl: ENSMUSG00000034297
UniProt: Q5SWW4
Position
11:complement(86157859..86248422)
AA seq 2171 aa
MSSSFVSNGASLEDCHCNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLGVWRRDQRPGRRELWIFWWGKDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
NQHQPVYLLSEEHVTLAQQSNSPFQVILSPFGLNGTLTGQAFKMSDSATKKLIGEWKQFY
PISCGLKEMSEEKQDDMDWEDDSLAAVEVLVAGVRMIYPACFVLVPQSDIPAPSSVGASH
CSASCLGIHQVPASTRDPAMSSVTLTPPTSPEEVQTVDPQSAQKWVKFSSVSDGFSTDST
SHHGGKIPRKLANHVVDRVWQECNMNRLQNKRKYSATSSGLCEEETADKIGCWDFVEATQ
RTSCSCLRHKSLKTRNTGQQGQAPSLGQQQQVLPKHKTNEKQDKSEKPQKRPLTPFHHRV
SVSDEIGMDTDSASQRLVISAADSQVRFSNIRTNDVAKTPQMHGTELANSPQPPPLSPHP
CDVVDEGVTKTPSTPQSQHFYQMPTPDPLVPTKPMEDRIDSLSQSFPPPFQEAVEPTVYV
GTAVSLEEDEANVAWKYYKVPKKKDVEFLPPQLPNDKFKDDPVGPFGQESVTSVTELMVQ
CKKPLKVSDEIVQQYQIKNQYLSAIASDTEQEPKIDPYAFVEGDEEFIFTDKKDRQNSER
EAGKKHKVEDGTSAVTVLSHEEDAMSLFSPSKQDAPRPTNHARPPSTSLIYDSDLAVSYT
DLDNLFNSDEDELTPGSKKSASGSDDKASSKESKTGNLDPLSCISTADLHKMYPTPPSLE
QHIMGFSPMNMNNKEYGSVDTAPGGTVLEGNSSSVGTQFRIEVEEGFCSPKPSEIKDFSY
VYKPENCQVLVGCSMFAPLKTLPSHCLPPIKLPEECVYRQSWTVGKLDLLPSGPSMPFIK
EGDGSNLDQDYGPAYTPQTHASFGMPPSSAPPSNGGAGILPSPSTPRFPTPRTPRTPRTP
RGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILSESV
MNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNNSGLF
LEDELDIIGRNTDCGKEAEKRFEALRASSVENVNGGLKESEKVPDELILLLQDQCTNLFS
PFGAADQDPFPKVGISSNWVRVEERDCCSDCCLALEHGRQFMDNMSGGKVDEALVRSSCL
HPWAKQNDASVQCSQDILRMLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRGS
YGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWEKLMLEPYGSQRDIAYVVLCPENEAL
LNGARSFFRDLTAIYESCRLGQHRPISRLLTDGIMKVGATASKKLSEKFVTEWFSQAADG
NNEAFSKLKLYAQVCRYDLGPYLASQPLDSSLLSQPNLVAPPNQSLVTAPQMTNTGNANA
PSATLASAASSTMTMTSGVPISTSVATANSTLTTTSSSSSSSLSSGVSSNKLPSFPPFGS
MNTSGTGSMSAQASTVQSGQLGGQQSSSLQAAGISGESASLPTQPHPDVSESTMDRDKVG
IPTDGDSHAITYPPAIVVYIIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKS
TVSVQIVPCQYLLQPVKHDDRQIYSQHLKSLAFSVFTQCRRPLPTSTNVKTLTGFGPGLA
METALKSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWI
LASCTDLYGELLETCIINIDVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIG
RLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSF
VIMPDSVSTGSVFGRSTTLNMQTPQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDL
AFNPNNDGADGMGIFDLLDTGDDLDPDIINILPASPTASPVHSPGSHYPHGGDAGKGQGT
DRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQYQCPLFLKASLHLH
VPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPAVQDRRSCLPVHFVVL
NQLYNFIMNML
NT seq 6516 nt   +upstreamnt  +downstreamnt
atgagttcctccttcgtgtcgaacggggccagcctggaagattgtcactgtaacctcttc
tgcctggccgacttgacaggaattaagtggaaaagatatgtatggcaaggcccaacttcc
gcccctattctgtttccggtgacagaagaagaccccattttgagcagttttagtcgatgc
cttaaggcagatgtacttggtgtttggcggcgagatcaaagacctggaagaagagaattg
tggatattttggtggggtaaagatcccaattttgctgaccttattcaccatgacttatca
gaagaggaagatggagtatgggagaatggcctttcctatgaatgccgtactttgcttttc
aaagcagttcacaatctgttggagcgatgtttgatgaaccgaaactttgtacgaattggc
aagtggtttgtgaagccatatgagaaagatgaaaaacctataaataaaagtgaacacttg
tcctgctctttcacctttttcttgcatggagacagcaatgtttgtaccagtgtggaaatt
aaccaacatcaacctgtataccttctcagtgaagagcatgtcacccttgctcaacagtct
aatagcccatttcaagttatcttaagtccatttggactaaatggcactctcacgggacag
gctttcaagatgtctgattcagctacgaaaaaattaattggtgaatggaaacagttctat
cctatttcatgtggtttgaaggagatgtctgaggagaaacaggacgatatggattgggaa
gacgattctttggctgcggtggaagttcttgttgcgggtgtccgaatgatctacccagca
tgctttgtgctagtccctcagtcagacattcctgctcctagctctgtgggagcttctcac
tgttcagcttcttgcttgggtatccatcaagtgcctgcttccacaagagatcctgctatg
tcttcagttactctcactccacctacatctcctgaggaagtccaaacagttgatcctcag
tccgcacagaagtgggtcaaattttcttcagtatccgatggcttcagcactgacagtact
agccatcatggtgggaaaatacccagaaaattagcaaatcatgtggtggatagagtctgg
caagaatgtaatatgaacagattacagaacaagaggaagtattctgctacatccagcggc
ctgtgtgaggaagagactgccgataaaataggatgctgggactttgttgaagccacacaa
agaacaagctgcagttgtttgaggcataaaagtctcaagacaagaaatactgggcaacaa
ggacaggcaccatctttagggcagcaacagcaagtacttcctaagcacaagaccaatgag
aagcaagacaagagtgagaagccacagaagcgccccttgactccctttcaccatcgtgta
tcagttagtgatgagattggcatggacacagattcagccagccaaagacttgtgatctct
gctgcagatagtcaagtgaggttttcaaacatccgaactaatgatgtagcaaagactcct
cagatgcatggcactgaactggcaaattcacctcagcctcccccacttagtcctcatcct
tgtgatgtggttgatgaaggagtgactaaaacaccttcaactccgcagagtcaacatttt
tatcaaatgccaacaccggatcccttggttcctaccaaaccaatggaagataggatagac
agtttgtcccagtctttcccacctccatttcaggaagctgtagaacctaccgtgtatgtt
ggtacagcagtaagcttggaagaagatgaagctaatgtagcctggaagtattacaaagtc
ccaaagaaaaaagatgtagaatttttaccacctcaacttccaaatgataaattcaaggat
gatccagttggaccttttggacaggaaagtgtaacatcagttacagagttaatggtgcag
tgtaagaagcctttaaaagtttctgatgaaatagtccagcaatatcaaattaaaaatcag
tatctttcagcaatagcatctgatacagaacaagaacctaaaattgatccatatgcattt
gttgaaggagatgaggaattcatttttactgataaaaaagatagacaaaatagcgagaga
gaagctgggaagaaacacaaggtggaagatgggacatctgctgtcacagtgttatcacac
gaagaagatgctatgtcattatttagtccctctaaacaagatgctccacgccctacaaat
catgcccgtcctccatcaaccagtttgatttatgactcagatttggctgtgtcttacact
gaccttgataacctcttcaattctgatgaagatgaattaacacctggatctaaaaagtca
gcaagtggatcagatgataaagccagctccaaagaatcaaagacaggaaatctggatccg
ttgtcctgcataagcactgcagacctccacaaaatgtaccccacgccaccctcactggaa
cagcacattatgggcttctctccaatgaatatgaataacaaagaatacggtagtgtggac
acagcacccggagggactgtcctggaaggaaatagctctagtgtaggaacgcagttcaga
atcgaggtcgaggaaggattctgtagccctaaaccgtctgaaattaaagatttttcttat
gtctataagcccgaaaattgtcaagttctagtaggatgttccatgtttgcacctttaaaa
actctaccaagccattgtctgcctcctatcaaattgccagaagagtgtgtttaccggcag
agctggactgttggaaaattggacttgcttccttcaggcccttcaatgccattcatcaag
gagggtgatggcagtaatttggatcaggactatggccccgcctacacaccgcaaacccat
gcttcttttgggatgcctccgagcagcgcacctcctagtaatggtggtgcaggaattctt
ccttccccatccacccctaggtttccaactccaaggactccaaggactccaaggacccct
cgtggggctggtgggcctgctagtgctcaaggttcagtcaagtatgagaattcagacttg
tattcaccagcttccaccccatctacatgccgacccctcaattctgttgaacctgcaact
gttccttccatccctgaagcgcacagtctttatgtaaacctcatcctttcagaatcagta
atgaatttgtttaaagactgtaattttgatagttgctgtatttgtgtctgcaatatgaat
atcaagggtgccgatgttggagtttacattccagacccaacccaagaagcacagtatcgg
tgcacctgtggcttcagtgctgtcatgaaccgaaaatttggaaataattcaggattattt
cttgaagatgaacttgacatcataggacgtaacacagactgtgggaaagaagcagaaaaa
cgttttgaagctctcagggcttcctctgtggagaatgttaatggaggcctgaaggaatct
gaaaaggtgcctgatgaattaatattactgctacaagatcaatgcactaatttattttca
ccctttggagcagcagaccaagatccttttcccaaagtgggtataagtagcaattgggtg
cgtgttgaggagcgggactgttgtagtgactgctgcctcgccttagaacatgggcgtcag
ttcatggataatatgtcaggagggaaagttgatgaagcacttgtcagaagctcatgctta
catccgtgggccaagcaaaatgatgcgagcgtgcagtgttcacaggatatacttcggatg
ctcctttctcttcagccagttcttcaagatgctattcagaaaaaaagaacagtgaggcct
tggggtgttcaaggtcctctcacatggcaacaatttcataaaatggctggccgaggctct
tatggaactgatgaatctccggaaccactgccgattcccacgtttttgttgggttatgat
tacgattttctggtgctttctccatttgctctcccttactgggagaaacttatgctggaa
ccctatggatctcaaagagatatagcctatgttgtactctgtccagagaatgaagctttg
ttaaatggagccagaagcttttttagagatctcactgcaatatatgagtcctgtcgatta
ggccaacacagacctatttctcgattgttgacggatgggatcatgaaagtgggagctact
gcatcaaagaaactttcagaaaagtttgtaacagaatggttttctcaggcagctgatggt
aacaatgaagcattttccaaattgaagctgtatgcacaagtctgcagatatgatttaggt
ccatatcttgcttctcagccgttggacagctctctgctctcccagccaaatttagttgcc
cctccaaatcagtctttggttactgcacctcagatgacaaatactggaaacgctaatgct
ccatctgccaccttagcatctgcggcaagtagcactatgacaatgacttcaggtgttccc
atatctacttcagttgccacagctaattcaactttgaccacaacttcatcttcatcatct
tccagtctgagtagtggagtatcatcaaataaactgccttcgtttccaccctttggcagt
atgaacactagtggtacaggatccatgtctgcacaagcaagtacggttcagagtggccag
ctaggaggacagcagtcgtcatctctgcaggcagcaggaatatcaggggagtcagcttct
cttcccactcagccacatcctgatgtgtctgaaagcacaatggatcgtgataaagtgggg
attcccacagatggtgattcacatgcaattacctaccctcctgcaattgttgtttatata
atcgatccttttacatatgaaaataaagacgagagcactaactcttctaatgtatggact
ttggggctccttcgatgcttcttggaaatggtccaaactcttcctcctcatatcaagagc
actgtttctgtgcagattgttccttgtcagtacctgttacaacctgtgaaacacgacgac
agacagatctactcccagcatttaaaatctttggctttttcggtgtttacccagtgtcgg
agaccacttccaacatcaaccaatgtaaaaacactgactgggtttggtccaggcttagct
atggaaactgctcttaaaagtcctgatagaccagagtgtattcgactttatacaccacct
tttattctggctccggtgaaggacaaacaaacagagctaggagagacctttggagaagct
ggacagaaatacaatgttctttttgtgggctactgtttatcacatgatcaaaggtggatt
cttgcatcttgcacagatctatatggagaactcctagaaacatgtatcattaacatcgat
gttccaaatagggcccgtcggaaaaagggttctgctagaagatttggtctacagaaactg
tgggagtggtgcttgggacttgttcagatgagctctttaccatggagagttgtgattggt
cgcctgggaaggattggacatggagagttgaaagattggagttgtttgctgagtcgtcga
aacttgcaatctctaagcaaaaggctcaaagacatgtgtaggatgtgtggcatatctgct
gcagactctccaagtatccttagtgcttgtttggttgcaatggaaccccaaggttctttt
gttatcatgccagattctgtgtcaactggttctgtttttggaagaagtaccactctaaat
atgcagacgcctcagctaaataccccacaagatacatcctgtactcatatacttgtgttc
cctacttctgcttctgtgcaagtagcttcagctacttacaccactgaaaatttggattta
gctttcaatcccaacaatgatggagcagacggaatgggtatctttgatttattagacaca
ggagatgatcttgatcctgatatcattaatatccttcctgcatctccaactgcatctcct
gtacattctccaggctctcattacccccatggaggtgatgctggcaagggtcagggtact
gatcggctactttcaacagaatcgcatgatgaagtaactaatattcttcaacaaccattg
gcccttggatactttgtatcaactgccaaagcgggtccattacctgactggttctggtca
gcatgccctcaagcacaatatcaatgccccctttttcttaaggcctctttgcacctccac
gtgccttcagtgcaatctgacgagctgcttcacagcaaacactcccacccactggactca
aatcagacttcagatgtcctcaggtttgttttggaacagtacaatgcactctcatggcta
acctgtgaccctgcagtccaggacagacgctcatgtctcccagttcattttgtggtgctg
aatcagttatataacttcatcatgaatatgctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (2)   
   Pfam (2)   
All databases (69)   

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