KEGG   Mus musculus (house mouse): 330149
Entry
330149            CDS       T01002                                 
Symbol
Hfm1, A330009G12Rik, Gm1046, Mer3, Sec63d1
Name
(RefSeq) HFM1, ATP-dependent DNA helicase homolog
  KO
K15271  ATP-dependent DNA helicase HFM1/MER3 [EC:5.6.2.4]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    330149 (Hfm1)
Enzymes [BR:mmu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     330149 (Hfm1)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    330149 (Hfm1)
SSDB
Motif
Pfam: Sec63 DEAD ResIII Helicase_C AAA_22
Other DBs
NCBI-GeneID: 330149
NCBI-ProteinID: NP_808541
MGI: 3036246
Ensembl: ENSMUSG00000043410
UniProt: D3Z4R1
Position
5:complement(106988059..107074427)
AA seq 1434 aa
MPKSDDCFFSMDNLFFSSPDETENFPVKEKSLDWFLPPAPLISEIPDIQELEEEIESYKL
LGKGKMPRMLTSNLKIINEDTNCISPTQKIHFSYNVHEQDYLNLGGSNNNDMSHVAGKLM
YGSSQKYKNHMGAKSPSARSSPGDTKLHDVAEDRQGTSAFKKRLSRTCDSEHDCDYADGS
LNLSSHISPVKLTQTKISKENAWTCSNSKQKRQYSTNKFKANDAFSASGIGKDIFKAPSF
PAASQPHDIQGITPNGLGSLKAVTEIPAKFRNIFKEFPYFNYIQSKAFDDLLYTDRNFVI
CAPTGSGKTVVFELAITRLLMEVPLPWLNMKIVYMAPIKALCSQRFDDWKEKFGPVGLNC
KELTGDTVMDDLFEIQHANIIITTPEKWDSVTRKWRDNSFIQLVRLFLIDEVHVIKDENR
GPTLEVVVSRMKTVQSLSRDLESASPVPVRFVAVSATIPNAEDIAEWLSDGERPAVCLKM
DESHRPVKLQKVVLGFPCSSSQTEFKFDLALNYKVYSVIRTYSDQKPTLVFCSTRKGVQQ
AASVLVKDAKFIISVEQKLRLQKSAYSIRDSKLKDTLVYGVGYHHAGMELSDRKLVEGLF
TSGDLPVLFTTSTLAMGMNMPAHLVVIKSTMHYSGGVFEEYSETDILQMIGRAGRPQFDT
TATAVIMTRLSTREKYVQMLACNDTVESSLHRHLIEHLNAEIVLHTITDVNIALDWIRST
MLYIRALKNPSHYGFSSGLNKDGIEAKLQELCLKNLKDLSSLDLIKMDEDVNFKPTEAGR
LMAWYYITFETVKKFCAISGKETLLDLISMISSCNEFLDVQLRISEKRILNTLNKDPNRI
TIRFPMAERIKTREMKVNCLIQAQLGCIPIQDFALTQDTVKIFRNGSRIARWLSDFVAAQ
EKKFAVLLNSVILTKCFKCKLWENSKHVSKQLDKIGISLSNTMVNAGLTSFKKIEEANAR
ELELILNRHPPFGTQIKEAVAHLPKYELEVEQIARYSDIKAEILVTIILRNFEQLQTKRT
APDFHYATLIIGDADNQVVFKHKIMDSVLLKSGNWVKKIDVKRALISEDLSINLISSDYV
GLDIHQKFTVFYFGPRKFVNETAMERSSETDISHSDYSGRATATGSSKGMATCKKPGNRE
CHHHCKNKHACGHDCCKIGVAQKPEVKESAMSSYLSDLKSRDAVSSLPLAKRLKIQMNKS
QNVDLKEFGFTPRPSLSSISRSEYLNTPELSILEQRNQHEIYGKVQQGPSEYRDKEVLGV
NLELGNEVWDDFDDESLIEVMSLSADAEKMAASGFGDTRDSSLGGSKLPFQKSSSRFQRD
NSNSFASSPGKPDAYLRDCSRSSFGLSSVAEIPQRAENASLANLQERRPLTLSPVIERMC
FAHSKKTPQSPKFKEVDIFIGNSGSKKEIDLSKYYPDDAAEEMKALLGIFNGIF
NT seq 4305 nt   +upstreamnt  +downstreamnt
atgccaaagtcagacgattgcttcttttccatggataatttgtttttcagtagcccagat
gaaactgaaaactttccagttaaggaaaaatcactggattggtttctccctcctgctcca
ctgatttcagaaattccagatattcaagagttagaggaagaaattgaaagttataagcta
ctagggaaaggaaagatgccaagaatgttaacatcaaacttgaagatcattaatgaagac
acaaattgtatttcaccaacacaaaaaatccatttttcctataatgtacatgaacaggat
tacctaaatttaggaggatcaaataacaatgacatgtcccatgtagctgggaagctgatg
tatggttcttctcagaaatataaaaatcacatgggtgctaagagtccatctgcaaggagt
agtcctggtgatacaaaattacatgatgtggcagaagacagacagggcacatcagcattc
aaaaaaagactgtctagaacatgtgacagtgaacatgactgtgactatgctgatggaagt
ttaaacttgagttctcatatcagcccagtgaaacttacccaaacgaaaataagcaaagag
aatgcatggacgtgtagcaatagtaagcagaaacgtcagtattctacaaacaaattcaaa
gcaaatgatgctttttctgcttctggaattggaaaagacatattcaaagcaccatcattt
cctgctgcatctcagcctcatgatattcaaggaataaccccaaatggcttaggttctttg
aaagctgtcacggaaatcccggcaaaatttagaaatatattcaaagaattcccttacttc
aactatatacaatccaaagcctttgatgatcttctttacacagataggaattttgtgatt
tgtgcccccactggttctgggaaaactgtagtgtttgagctagcgataacaagattgtta
atggaagtaccattgccatggctaaacatgaagattgtttacatggcaccaataaaagcc
ctttgtagtcagcggtttgatgactggaaagaaaagtttggaccagtaggcttgaattgt
aaagaacttactggtgatacagtaatggatgacctgtttgagattcagcatgcaaatata
attataacaactccagagaagtgggacagtgtgactaggaagtggagagacaactctttt
atccaactggttcgactgtttctcattgatgaggtgcatgttattaaagatgaaaatcgt
ggtccaactcttgaagttgtagttagcagaatgaaaactgtacagtctttatctagggat
ttagaaagtgccagccctgttccagtgagatttgtagctgtgtctgcaacaattcccaat
gctgaggatatcgcagaatggctttcagatggtgagagacctgctgtatgtctcaaaatg
gatgagagccatagacctgtgaaacttcagaaagtagtcctgggttttccctgtagtagt
agccaaactgaatttaagtttgatttggccctcaactataaagtgtacagtgttattcga
acatactccgatcagaagcccacacttgtgttttgttcaacaaggaaaggtgtgcagcag
gctgcttctgttcttgtgaaggatgctaagtttatcatctctgtggagcagaaactacgg
ttgcagaagtctgcatattctataagggattcaaagctgaaagataccttggtatatggt
gttggttaccatcatgctggaatggagctgtcagatagaaaattggttgaaggattgttt
acctctggagatctaccagttcttttcactaccagtactctagctatgggcatgaacatg
ccggctcacctggttgttataaagtctaccatgcactacagtggaggtgtgtttgaagag
tacagcgagaccgacatcctgcagatgattgggagagctggcagaccccagtttgacact
acagctactgcagtcattatgactcgactaagtacaagagagaagtacgtgcagatgcta
gcttgtaacgacactgtagagagcagtttgcacagacatcttattgaacatttaaatgca
gaaatagtgctgcataccatcacagacgtgaacattgctctggactggatccgatcaaca
atgctgtatatcagagctctgaaaaacccatctcactatggtttttcatctggattgaac
aaagatgggattgaagcaaaattacaagaattatgtttgaagaatctgaaagatttatca
tcactagacctgataaagatggatgaagatgttaattttaaaccaacagaggcaggaaga
ctaatggcttggtattatattacatttgagacagtcaagaaattttgtgcaatcagtgga
aaagaaactttattggatttaatttcaatgatatcgagctgcaatgagtttctagatgtg
cagctgaggataagtgaaaagagaatactgaacaccttaaacaaagacccaaaccggata
actatcagatttccaatggcagaaagaattaaaacaagagaaatgaaagtaaactgtctt
attcaggctcagctaggatgcattcctatacaagattttgctttgacacaagatacagtg
aagattttcagaaatggctcacgaattgcaagatggttgtcagattttgtggctgctcag
gaaaagaagtttgctgtgcttttaaacagtgtgattttaactaaatgttttaagtgtaaa
ctctgggaaaactctaaacatgtatcaaaacagctggataaaattggcatatcattgtca
aataccatggtaaatgcaggcttaacttcttttaaaaaaatagaagaagcaaatgcaaga
gaacttgaactgattttaaatagacacccaccatttgggacccagataaaagaagctgtg
gcgcatctgccgaagtatgagcttgaggtggagcagattgcaagatacagtgatatcaag
gcagaaatactggtgaccattatattaagaaactttgagcagctgcaaactaaaagaaca
gcaccagacttccactatgccaccttaatcataggtgatgcagataaccaagtcgttttt
aagcacaaaattatggattctgtcttgttaaaaagtggaaattgggttaaaaaaattgat
gtgaagagagctcttatatcagaagatctcagcataaatctaattagttctgattatgtt
ggtcttgatattcaccagaaatttacagtcttttatttcggacccaggaagtttgtaaat
gaaacagctatggaaagaagctcagaaacagatatttctcattctgactactcaggtaga
gccactgcaacaggatccagtaaaggaatggctacctgcaaaaaacctgggaacagagaa
tgccatcatcactgtaaaaataaacacgcatgtggacatgactgctgtaaaattggagtt
gcacaaaagccggaagttaaagagtcagcaatgtcttcatatctgtctgacttaaaaagc
agagatgctgtttcttctcttcctctagccaagcgactcaagatacagatgaacaaatct
caaaatgtggaccttaaagagtttggttttactccaaggccttccctttccagtatatca
aggtcagaatatttaaatacccctgaattgtcaatattagaacagaggaatcagcatgaa
atctatggaaaagttcaacagggaccatctgaatatcgtgacaaagaagttctgggtgtg
aacttagagctgggaaatgaagtctgggatgactttgatgatgagagcttaatagaagtt
atgagcctttcagctgatgctgagaagatggctgcatcaggatttggagacactcgtgat
tcaagtctcggcggaagtaagctacccttccaaaagtcaagcagcagattccaaagagac
aactcaaacagttttgcttcgtcgcctgggaagccagatgcttatttgcgagattgttcc
aggtccagcttcgggctgtcctctgtggcagagatccctcagcgggctgagaatgcaagt
cttgccaatttacaagagaggagaccgctgactctctcaccagtgattgagaggatgtgc
tttgcccactctaagaaaacaccacagtctcccaagtttaaggaagtggatatttttatt
ggaaacagtggctctaaaaaggaaattgatcttagtaagtattatcctgatgatgcagct
gaagaaatgaaggctcttctgggaatatttaatggcattttctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (22)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (20)   
DNA sequence (38)   
   RefSeq(nuc) (28)   
   GenBank (5)   
   EMBL (5)   
Protein domain (5)   
   Pfam (5)   
All databases (104)   

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