KEGG   Mus musculus (house mouse): 353234
Entry
353234            CDS       T01002                                 
Symbol
Pcdha2
Name
(RefSeq) protocadherin alpha 2
  KO
K16493  protocadherin alpha
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    353234 (Pcdha2)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mmu04515]
    353234 (Pcdha2)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    353234 (Pcdha2)
Cell adhesion molecules [BR:mmu04515]
 Cadherins
  Protocadherins
   353234 (Pcdha2)
SSDB
Motif
Pfam: Cadherin Cadherin_tail Cadherin_2 Cadherin_3 Cadherin_C_2
Other DBs
NCBI-GeneID: 353234
NCBI-ProteinID: NP_932785
MGI: 2681880
Ensembl: ENSMUSG00000104148
UniProt: Q91Y17 Q05C01
Position
18:37072258..37320714
AA seq 948 aa
MPSLRGGPEVRQCLLLLLPFLAAWEAGNGQLHYSVPEEAKHGTFVGRIAQDLGLELTELV
PRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVE
VEVRDINDNPPRFPMTEKTIQFSESRSLDSRFPLEGASDADIGVNALLSYKLSPSELFFL
DVQTSDELSQSLFLVLGKSLDREEDAEVKLLLVATDGGKPELTGTVQILIKVLDVNDNEP
TFPQSVYKVQLLENTANGTLVMKLNASDADEGSNSEIVYSLGSDVSSTTRTKFQIDPNSG
EVRTKGELDYEERTSYEIQVIASDKGTPAMSGHCKISVKLVDINDNTPEVSITSLSLPVQ
ENAPLGAVIALISVSDRDSGVNGQVTCSLSPHVPFKLVSTFKNYYSLVLDSALDREATAD
YKVMVTARDGGSPSLRATASVSVEVADVNDNAPVFAQPEYTVFVKENNPPGAHIFTVSAM
DADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELLQFQVTARDA
GVPALGSNVTLQVFVLDENDNAPLLLPQGAVGVGGSVSELVPRSVGSGHVVTKVRAVDAD
SGYNAWLSYELQSTVGMRSLFRVGLYTGEISTTRALDEVDAPRQRLLVLVKDHGEPSLTA
TATVLVSLVENSQAPKTSSRALVDAAGQEASLVTVNVYLVIAICAVSSLLVLTLLLYTAL
RCSAMPTDGACAPGRPMLVCSSAVGSWSYSQQRRQRVCSGEGPPKTDLMAFSPSLSQGPE
SAEERQPPLEAEYLGKPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTV
SSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQE
PANNQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
NT seq 2847 nt   +upstreamnt  +downstreamnt
atgccttctttgagagggggcccagaggtcaggcagtgtctgctgctcttgcttcctttc
ctcgcagcctgggaggcagggaacggccagctccactactccgtccccgaggaggccaaa
cacggcacttttgtgggccgcatcgcgcaggacctggggctggagctgacggagctggtg
ccccgcctgttcagggtggcttccaaggaccgcggggaccttctggaggtaaatctgcag
aatggcattttgtttgtgaattctcggatcgaccgggaggagctgtgcgggcggagcgcg
gagtgtagcatccacctggaggtgatcgtggacaggccgctgcaggttttccacgtggag
gtggaggtgagggacattaacgacaacccgccgcgatttccaatgacagaaaaaactatc
cagttttccgaatctaggtcgcttgactcaaggtttcctttagagggagcctctgatgca
gatatcggagtaaatgctcttctgtcctacaagctcagccccagtgagcttttctttcta
gatgttcaaacaagcgacgaactaagccaatctctgtttcttgtgctgggaaaatctctg
gacagagaggaggatgcggaggtgaaattgttactggtagctactgatggaggcaagcct
gagctcaccggcactgttcaaatactcatcaaggtgttagatgtgaatgacaacgaacct
actttcccccaatccgtttacaaagtacagttgttagagaacactgcaaacggaacctta
gtgatgaaattaaatgcttctgatgcagatgaaggatcaaacagcgagattgtgtattca
ctcggtagtgatgtgtcttccaccacacggactaagtttcaaatcgaccccaactcagga
gaagtcagaactaagggagagttagattatgaagaaaggacatcctatgaaatccaggtc
attgcatctgacaagggaaccccagcgatgtcaggacattgtaaaatttcagtaaaactt
gtggatatcaatgacaatacgccagaagtctcaataacgtctctctcactacccgtgcaa
gagaatgctcccctgggtgctgtcatcgccctcatctcagtgtcagatcgtgactcggga
gtcaatgggcaggtgacctgctccctgagtcctcatgtccccttcaagctggtgtccact
ttcaagaattactattctctcgtgctggacagcgccttggaccgggaagccacagctgac
tataaggtaatggtgacagcgcgggatgggggctcgccctcgctacgggccacggccagc
gtgtctgtggaggtggctgacgtgaacgacaatgctccagtgttcgctcagcccgaatac
accgtgtttgtgaaggagaacaatccaccaggagcgcacatcttcacggtgtcagcgatg
gatgctgacgcacaggagaatgcgctggtgtcctactcgctggtggagcggagggtgggc
gagcgcttgctgtctagctatgtgtctgtgcatgcggagagcggcaaggtgttcgctctg
cagcctctggaccatgaggagctggagctgctgcagtttcaggtgactgcgagggatgct
ggtgtgcctgccctgggcagcaatgtgactctgcaggtgtttgtgctggatgagaatgac
aatgcacccttgctgctgcctcagggagctgtgggagttggcggctcagtgagcgagctt
gtacctaggtcagtgggttcgggccatgtagtcaccaaggtgcgtgccgtggatgcggat
tctggttacaacgcgtggctgtcatatgaactgcaatccacagtgggcatgcgtagcctg
ttccgcgtgggtctgtatacaggcgagatcagcaccacgcgagccctagatgaagtggat
gcgccacgccagcgcctgctagtgttggtgaaggaccatggtgagccttcgctgactgcc
acagccacagtgttagtttctctagttgagaatagtcaagctccaaaaacttcatcaaga
gcgttggtagatgctgctggccaagaggcgtctctggtgactgttaacgtgtacctggtc
atcgccatctgcgcggtgtccagcctgttggtgctcacgctgctgctgtacacagcgctg
cgctgctcagcgatgcccactgatggagcctgtgctccggggaggcccatgctggtgtgc
tccagcgcggtggggagctggtcatactcgcagcagaggcgacagagagtgtgctctgga
gaaggcccccctaagactgatctcatggccttcagccctagcctatcccaaggtccggaa
tcagcagaagagagacaaccacccttagaggccgaatacttaggaaagccccggcagccc
aaccctgactggcgctactctgcctcgctaagagcaggcatgcacagctctgtgcacctg
gaggaggctggcattctacgggctggtccaggagggcctgatcagcagtggccaacagta
tccagtgcaacaccagaacctgaggcaggagaggtgtcccctccggtgggcgccggtgtc
aacagcaacagctggacctttaaatacggaccaggcaaccccaaacagtccggtcccggt
gagttgccagacaaattcattatcccaggatctcctgcaatcatctccatccggcaggag
cctgctaacaaccaaattgacaaaagcgattttataaccttcggcaaaaaggaggagacc
aagaaaaagaagaaaaagaagaagggtaacaagacccaggagaaaaaagagaaagggaac
agcacgacggacaacagtgaccagtga

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Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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