KEGG   Mus musculus (house mouse): 353237
Entry
353237            CDS       T01002                                 
Symbol
Pcdhac2, CNRc2
Name
(RefSeq) protocadherin alpha subfamily C, 2
  KO
K16493  protocadherin alpha
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    353237 (Pcdhac2)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mmu04515]
    353237 (Pcdhac2)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    353237 (Pcdhac2)
Cell adhesion molecules [BR:mmu04515]
 Cadherins
  Protocadherins
   353237 (Pcdhac2)
SSDB
Motif
Pfam: Cadherin Cadherin_tail Cadherin_2 Cadherin_C_2 Cadherin_3 SGBP_BT4661-like
Other DBs
NCBI-GeneID: 353237
NCBI-ProteinID: NP_001003672
MGI: 1891443
Ensembl: ENSMUSG00000102697
UniProt: Q91Y09
Structure
Position
18:37276731..37320716
AA seq 1006 aa
MEQAGARPGATEHPRPLRPLPWLLLLSFRLLLVLLPGPAASQLRYSVPEEQSPGALVGNV
ARALGLELRRLGPGCLRINHLGAPSPRYLELDLTNGALFVNERIDREALCEQRPRCLLSL
EVLAHNPVAVSAIEVEILDINDNSPRFPRPDYQLQVSESVAPGARFHIESAQDPDVGANS
VQTYELSPSEHFELDLKPLQENSKVLELVLRKGLDREQTALHYLVLTAVDGGIPARSGTA
QIAVRVLDTNDNSPAFDQSTYRVQLREDAPPGTLVVKLNASDPDEGSNGELRYSLSSYTS
DRERQLFSIDVTTGEVRVSGTLDYEESSSYQIYVQATDRGPVPMAGHCKVLVDIIDVNDN
APEVVLTDLYSPVPEDVALNTVVALLSVNDQDSGSNRKVSLGLEASLPFRLNGFGNSYTL
VVSGPLDRERVAAYNITVTATDGGVPPLTSQRTLQVEISDINDNPPSFLKDSYSIYIEEN
NLPGVLLCTVQATDPDQKENAEVTYSLLDREIQGLPVTSYVSINSASGSLYAVNSFDYEK
FREFFVTVEAQDKGRPPLSSTVTANVYVVDVNDHAPHILYPTSTNTSAAIEMVPRTAPAG
YLVTKVIAMDSDSGQNAWLFYHLVPTSDSDLFKVELHTGEIRITRKIGDESGTTFNLTVV
VRDNGEPPLSATVAITVAVVDRVSKMLPDTQRHIKSPRTYSEITLYLIIALSTVSFIFLL
TIIVLSIIKCYRYTAYGTACCGGFCGVRERCPAELYKQANNNIDARIPHGLKVQPHFIEV
RGNGSLTKTYCYKACLTAGSGSDTFMFYNTGAQTGPGPGGAQASVTDNRQLTGQSRHSTG
NLIILKNDAGSQNEPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSS
ATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEPA
NNQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
NT seq 3021 nt   +upstreamnt  +downstreamnt
atggagcaggcgggagccagacctggggcgacagagcatccgcgacccctgcggcccttg
ccctggctgctgcttctgtctttccgactgctgctggtgctgctgccaggcccagcggcc
tcccagctacgatactccgtgccggaggagcagagccccggcgcgctcgtgggcaacgtg
gccagagccttggggctagaactgcggcgcttgggacctggctgtctgcgcatcaaccat
ttgggtgcacccagcccgcgctacctggaactggacttgaccaatggagcgctcttcgtc
aacgagcggatagatcgcgaggcgctgtgcgagcagcggcctcgctgcctgctcagcttg
gaagtgctggctcacaaccctgtggcagtgagcgcgatcgaggtggaaatactggacatc
aatgacaactctccgcgcttcccgcggccggattatcagcttcaggtaagcgaatccgtg
gcacctggagcgcggtttcacatagagagcgcacaggaccctgacgtcggtgccaactca
gtgcagacctacgagctcagccccagcgagcactttgagctggatcttaaacccttgcag
gagaatagcaaggtgctggagctcgtgctgcggaagggcctagaccgggagcagactgcc
ttgcactacttggttctcactgcggtggatgggggcatcccagctcgctcaggcacagct
cagatcgccgttcgtgtcctggacacgaatgacaattctcctgcctttgaccaatccact
taccgcgtccagctgcgagaggatgctcctccgggcacattggtagtgaagttgaatgcc
tcggacccggatgagggttctaacggtgaactcaggtactccttgagcagctacacatca
gaccgggagagacagctcttcagcatcgatgtgactacaggggaagtgagagtaagtggg
actctggattatgaggagtcttcctcctaccagatctatgtgcaagctactgaccgggga
ccggtacccatggcgggacactgcaaggtgttggtggacattatagatgtgaatgacaac
gctccagaggtggtgctcacagacttatacagcccagtgcctgaggatgttgccctcaac
actgttgtggcccttctcagtgtgaatgaccaagattcaggctccaacaggaaagtaagc
ctgggtctggaggcttcactgcccttccggctgaatggctttggaaactcctataccctg
gtggtgagtggcccattggatcgggagcgggtagctgcctacaacatcacagtgacagct
actgatgggggagtaccaccactcacatctcaaaggacattgcaggttgagatctctgac
ataaatgacaatccaccaagcttcctgaaggactcctattccatctacatcgaggaaaac
aatttaccaggtgtgttgctctgcactgtgcaagccacagacccagatcaaaaggagaat
gcagaggtgacctactcactcctagacagggagattcaagggctgccagtcacctcctat
gtctccattaacagtgccagcggcagcctttatgctgtcaactcctttgactatgagaaa
tttcgagagttttttgtgactgtggaggcccaggataaggggaggccaccactaagcagc
actgtgaccgccaacgtgtatgtggtggacgtgaatgaccacgccccccatattctatac
cctacctcaactaatacatcagcagccattgaaatggtgccacggactgcccctgctggc
tacctggtcaccaaagtcatagccatggattcagactctgggcagaatgcttggctcttt
taccatttagtcccaacgtctgactcggacctttttaaagtagaacttcacacaggagaa
attaggattaccaggaagataggagatgagagtggcaccactttcaacctgaccgtggtg
gtccgtgacaatggagagccacctctatcagctaccgtggccatcacagtagctgtggtg
gacagggtttctaaaatgctccctgacactcagagacatataaagagtcctcggacatac
tctgagatcacactttatctgataatagcattaagcacagtgtcttttatattccttttg
acaatcattgttctgagcatcattaagtgctaccgctacactgcttatggcacggcatgc
tgtgggggcttctgtggagtgagggagcgctgccctgcagagctgtacaagcaggccaat
aacaatatcgatgccaggataccacatggcctcaaagtacagcctcacttcattgaggtt
cgaggcaatggctccctcaccaagacctactgctacaaggcctgcctgacagcaggctca
gggagtgatactttcatgttttacaacacaggggcccagacagggccagggcctggggga
gcccaagcctcagtgactgacaacaggcaactcaccggccaaagtaggcacagtaccggg
aacctgattatcctaaaaaatgatgctggctctcaaaatgagccccggcagcccaaccct
gactggcgctactctgcctcgctaagagcaggcatgcacagctctgtgcacctggaggag
gctggcattctacgggctggtccaggagggcctgatcagcagtggccaacagtatccagt
gcaacaccagaacctgaggcaggagaggtgtcccctccggtgggcgccggtgtcaacagc
aacagctggacctttaaatacggaccaggcaaccccaaacagtccggtcccggtgagttg
ccagacaaattcattatcccaggatctcctgcaatcatctccatccggcaggagcctgct
aacaaccaaattgacaaaagcgattttataaccttcggcaaaaaggaggagaccaagaaa
aagaagaaaaagaagaagggtaacaagacccaggagaaaaaagagaaagggaacagcacg
acggacaacagtgaccagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (6)   
   Pfam (6)   
All databases (32)   

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