KEGG   Mus musculus (house mouse): 380713
Entry
380713            CDS       T01002                                 
Symbol
Scarf1, SREC, SREC-I, mKIAA0149
Name
(RefSeq) scavenger receptor class F, member 1
  KO
K24318  scavenger receptor class F member 1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    380713 (Scarf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    380713 (Scarf1)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:mmu04990]
    380713 (Scarf1)
Membrane trafficking [BR:mmu04131]
 Endocytosis
  Phagocytosis
   Scavenger receptors
    380713 (Scarf1)
Domain-containing proteins not elsewhere classified [BR:mmu04990]
 Laminin domain-containing proteins
  Laminin EGF-like domain-containing proteins
   380713 (Scarf1)
SSDB
Motif
Pfam: Laminin_EGF EGF_2 C8A_B_C6_EGF-like
Other DBs
NCBI-GeneID: 380713
NCBI-ProteinID: NP_001004157
MGI: 2449455
Ensembl: ENSMUSG00000038188
UniProt: Q5ND28 Q68EF1
Position
11:75404310..75417408
AA seq 820 aa
MLAAMGLELVFSLLLLWTQGTQGSTLDPAGQHVCKGSSPSELQCCPGWRQKDQECTIPIC
EGPDACRKEEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGHDCRETCPCHPRGQCEPATGD
CQCQPNYWGRLCEFPCTCGPHGQCDPKTGLCHCDPGWWSPTCRRPCQCNPASRCDQATGT
CVCPPGWWGRRCSFSCNCHTSPCMQDSGRCVCLPGWWGPECSRKCQCVRGQCSVTSGHCS
CPPGFHGIRCELPCNPGHYGAQCKESCGHCELNATCSPVTGNCESCKPGWNGTQCKQPCP
AGTFGERCTGQCPRCRLGEPCQAETGHCQHCDPGWLGHRCENPCPLGTFGKGCSSTCPAC
AQGTCDAVTGECVCSAGYWGTSCNSSCPAGFHGNNCSMPCQCPEGLCHPVSGTCQLGRHG
KNALIVGILVPLLLLLMGIVCCAYCCSGTRLDPKDRPERNGAAFFRMKQQVWGALTNLGS
ALPCGSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASDDSFSSDPDSGEEDEAHAYF
VPPREEMVPMAQEESPEASLPGGSFPPPEDASTPFPIPRTSSLARAKRPSVSFAEGTKFA
PQNGRSSGDLSSPIRKPKRLSRGAQPRPEGQEAEESTGPEQVNTEEDAPTATSSGDPATS
HGQLPPGSQMVAECAETTDGGIQESSGSVATIYMLAGTPQKPEGPVWSVFRRLGNYQKDQ
MDPKVKSAIPKPLRRSLGRNQASAGSAPGAVLSQAMESTAVRPEETPRGLGDGIESSGTV
QEPDAGGSSLEQDSQKQAEEKEQEEPLYENVVPMSVPPQH
NT seq 2463 nt   +upstreamnt  +downstreamnt
atgctggccgccatgggactagagctggtgttctcactgttgctgctctggactcagggg
acccagggatccacgctagaccctgctggtcagcacgtctgtaaaggcagcagcccctct
gagctccagtgttgtcccggctggaggcagaaagatcaagaatgcaccatccccatctgt
gaggggcctgatgcctgcaggaaagaagaggtgtgcgtgaagccgggcctctgtcggtgt
aaacctggattcttcggagcccagtgcagctcccgctgtccaggacagtactggggccac
gactgtcgtgagacctgcccctgtcatccacgtggccagtgcgaaccggccacgggtgat
tgccaatgccagcctaactactggggcaggctctgtgagttcccctgcacctgcggcccc
cacggacagtgcgacccaaagacaggcttgtgccactgtgaccctggctggtggtcaccc
acgtgtcgtcgcccatgccagtgcaacccagcctcacgctgtgaccaggccactggaacc
tgtgtatgcccgccgggctggtggggccgccgctgcagcttcagttgcaactgccacacc
tcgccctgcatgcaggactccggccgctgcgtctgcctgccgggctggtggggtccggag
tgcagtcgtaagtgccagtgtgtgcgaggccaatgcagcgttacttctggccactgttcc
tgccctcctggcttccatggaatccgctgtgagctgccttgcaaccctggccactatggg
gcacagtgcaaagaaagctgtggccactgtgagctgaatgccacatgctctccagtcacc
ggcaactgtgagtcctgcaagccaggctggaacggtactcagtgcaagcagccatgtcct
gcaggcacctttggtgagaggtgcactgggcagtgcccccgctgccggcttggggagccc
tgtcaagcggaaactgggcactgccagcactgcgaccccggttggctggggcacaggtgt
gagaacccttgtccccttggcacctttgggaagggctgcagctcaacctgccctgcctgt
gctcaggggacttgcgatgccgtgactggggaatgtgtctgcagtgctggctactggggg
accagctgcaacagttcctgcccagctggcttccacggaaacaactgctctatgccctgc
caatgcccagaggggctctgccaccctgtgtctgggacctgccagctgggccgtcatggt
aagaacgccctcattgtgggcatcctggtacctctgctgctgctcctcatgggcatcgtc
tgctgtgcctactgctgctcaggaacccgactggaccccaaggacaggcctgagagaaat
ggggctgcctttttcagaatgaagcagcaggtatggggggccctcaccaacttgggctcg
gcactgccctgtggctccctcagtaactacaagctaccctgggtgacagtttctcatcac
gatccagaggtccccttcaaccatagcttcatcgagcccccctctgccggctgggcctct
gacgactccttctcttctgatcctgactctggagaagaggacgaagctcatgcctacttc
gtgccgcctcgagaagagatggtccctatggcccaagaagagtcaccagaagccagcctt
cctggaggctccttccctccccctgaggatgcctccacaccattccccattccacgtacc
tccagcctggctagggccaagaggccatccgtctcctttgctgaaggcacgaagtttgca
ccacagaatggccgaagctctggggatctctccagccccatacgaaaacccaagagactc
tccagaggtgctcaaccccgtcctgaagggcaggaggcggaggagtctacaggcccagag
caagtgaacacagaggaggatgctcctacggccacaagctctggagatcctgccactagt
cacggccaacttccacctggtagccagatggtagctgagtgtgcggagaccactgatgga
ggcatccaggagagctcaggatctgtggccactatctatatgctggcagggacacctcag
aaacctgagggtcctgtctggtctgtctttcgtcgtttgggaaactaccagaaagatcag
atggatcccaaagtaaagagtgctatccctaagcctctgcgccgatctctgggtcggaac
caggccagcgctggctcagctccaggtgctgtgctctcccaggccatggagtccaccgca
gttagaccagaggaaacacccagaggtctgggagatggcattgagagctcagggactgtc
caggagccagacgctggaggcagttccctggaacaggattcccagaagcaggcggaagag
aaggagcaagaggagcccctgtatgagaatgttgtgcccatgtccgtgccgccacagcac
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (151)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (145)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (12)   
   RefSeq(nuc) (2)   
   GenBank (5)   
   EMBL (5)   
Protein domain (3)   
   Pfam (3)   
All databases (175)   

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