KEGG   Mus musculus (house mouse): 50912
Entry
50912             CDS       T01002                                 
Symbol
Exosc10, PM-Scl, PM/Scl-100, Pmscl2, RRP6, p2, p3, p4
Name
(RefSeq) exosome component 10
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    50912 (Exosc10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    50912 (Exosc10)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     50912 (Exosc10)
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC
Other DBs
NCBI-GeneID: 50912
NCBI-ProteinID: NP_057908
MGI: 1355322
Ensembl: ENSMUSG00000017264
UniProt: P56960
Position
4:148642870..148666854
AA seq 887 aa
MAPPSPREHQSAPATSATKPDAEMVLPGFPDADSFVKFALGSVVAVTKASGGLPQFGDEY
DFYRSFPAFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDRSKVTELEDKFDLLVDTNDVI
LERVGMLLDEASGVNKHQQPVLPAGLQVPKTIVSSWNRKAGEYGKKAKSETFRLLHAKNI
VRPQLRFREKIDNSNTPFLPKIFVKPNARKPLPLALSKERRERPQDRPEDLDVPPALADF
IHQQRTQQVEQDMFAHPYQYELDHFTPPQSVLQRPKPQLYRAVGETPCHLVSSLDELVEL
NEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDPA
IVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQYQ
LADWRIRPLPEEMLSYARDDTHYLLYIYDRMRLELWERGNHQPVQLQVVWQRSRDICLKK
FVKPIFTDESYLELYRKQKKHLNSQQLTAFQLLFAWRDKTARREDESYGYVLPNHMMLKI
AEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAREMPLLKSENAAGVRKSGPLPSAE
RLENDLFGPHDCSHAPPDNYQNTSTDGTLPLQKQPSLFTEGKEETSVDAGCLLATAVITL
FSEPNTEEGGKTPLTVAQKKAQNIMQSFENPFRMFLPSLEHKAHISQAAKFDPSSKIYEI
SNRWKLASQVQVQKEPKEATKKKVAEQTAAREEAKEEAAAGVLEQAIPVRQQAALENATK
KRERATSDLRTIEQKQEKKRLKSSKKAKDPDPPGKDFSPYDYSQSDFRAFAGDSKSKPSS
QFDPNKLAPSGKKGVGAKKCKQSVGNKSMSFAVGKSDRGFRHNWPKR
NT seq 2664 nt   +upstreamnt  +downstreamnt
atggcgcctcccagtccccgggagcatcagtccgcgccggcgaccagtgcgaccaagcct
gacgcggagatggtactgcctggcttccccgatgcagacagcttcgtaaagtttgcactt
gggtcggtagtggcagttaccaaggcatccgggggcctgccacagttcggtgacgagtat
gatttttacagaagtttccctgccttccaggcattctgtgagacacaaggagacaggtta
ctgcagtgcatgagtcgggtaatgcagtaccatggctgtcgcagcaacatcaaagaccga
agtaaagtgactgaattggaggacaagtttgatttattagtcgataccaatgacgtgata
ttggagagagtgggcatgttactggatgaagcctccggtgtgaacaagcatcagcagcct
gtccttcctgcagggctgcaggtccccaaaacaatagtatccagctggaatcggaaggca
ggagagtatggcaaaaaggcaaaatcggagactttccgactgctgcatgcaaaaaacatc
gtgcgacctcagctcaggtttcgagagaagatcgacaattctaacacaccatttctcccg
aagatctttgtcaaacccaatgcccggaagccactccctctggctctctcaaaagaaagg
cgggaacgcccgcaggaccgtccggaggacctggatgtccccccagccctggcagatttc
atccatcagcagcgaacccagcaggtggagcaggacatgtttgcacacccttaccagtat
gaactggatcactttactccgcctcagtcggtgctgcagaggccgaagccccagttgtac
cgagctgtgggagagactccctgccacttggtgtcgtccctggatgagctggtggagctc
aacgagaagctcctgggctgtcaggagtttgccgtggacttagagcatcactcttacaga
agcttcctaggactcacctgcctcatgcagatctccacccggacagaagacttcattgtc
gacaccctcgagcttcgcagtgacatgtacattctcaacgagagcctcacggacccagcc
atcgttaaggtcttccatggtgccgactctgacattgagtggctgcagaaagacttcgga
ctctatgtggtgaacatgtttgacacacaccaggcagcacggcttctcaacctggctcgg
cactcactcgaccatctgctgagactctactgcggtgtggaatcaaacaagcaatatcag
ctggcagactggaggatacgtcctctgccagaggaaatgctgagctacgcccgggatgac
acccattacctgctctacatctatgaccgaatgaggctggaactgtgggaaagaggcaac
caccagcctgtccagttgcaggtggtttggcagcggagcagggacatctgcctcaagaaa
tttgtcaagcctatctttacggacgagtcctacctggagctctatcgaaagcaaaagaag
cacctgaactcgcagcagctgaccgccttccagctgctgtttgcttggagggataagaca
gctcgcagggaggatgagagctacggatatgttctaccaaatcacatgatgctaaagata
gctgaggaactgcctaaggagcctcaaggcatcatagcttgctgtaacccagtaccacct
cttgtccggcagcagatcaatgagatgcatctcctaatccagcaggctcgagagatgccc
ctgctcaagtctgaaaatgcagctggagtgaggaagagcggaccactgcctagcgccgag
agattggagaatgatctctttggaccccatgactgttcccacgcccctccagataactac
cagaacacctcaactgatgggaccctgccacttcagaagcagccaagcctattcactgag
ggcaaagaagagacctctgtggatgccggatgcctccttgccacagccgtcatcactctg
ttcagtgaacctaacactgaggaaggtggaaagactccattgacggtggcccagaaaaaa
gcccagaacataatgcagtcctttgaaaacccatttcggatgttcctgccttctctggaa
cacaaggcccacatctctcaagcagcaaagtttgatccttcttcgaaaatctatgaaatc
agcaaccgctggaagctggccagccaggtccaggtccagaaagaacctaaagaagcaacc
aagaagaaggtagctgagcaaacagctgcccgggaggaggcgaaggaggaggctgcagcc
ggtgtgctggaacaggctatccctgtgcggcagcaggccgcgctagaaaatgctactaag
aagagagaacgagccaccagtgacctgaggactatagagcaaaaacaggagaagaaacga
ctaaaaagctccaagaaagccaaggaccctgatcccccagggaaagacttcagtccctat
gactacagccagtcagacttcagggcctttgctggggacagtaaatccaagccttcctcc
cagttcgaccccaataagctggcaccttccggcaagaaaggtgttggagccaaaaaatgt
aaacagtcggtgggaaacaaaagcatgtcatttgctgttggaaagtcggacagaggcttc
cgccacaactggccaaagagatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (11)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (71)   
   RefSeq(nuc) (13)   
   GenBank (29)   
   EMBL (29)   
Protein domain (3)   
   Pfam (3)   
All databases (107)   

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