KEGG   Mus musculus (house mouse): 52639
Entry
52639             CDS       T01002                                 
Symbol
Wipi1, 4930533H01Rik, D11Ertd498e
Name
(RefSeq) WD repeat domain, phosphoinositide interacting 1
  KO
K17908  autophagy-related protein 18
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04136  Autophagy - other
mmu04140  Autophagy - animal
mmu05010  Alzheimer disease
mmu05014  Amyotrophic lateral sclerosis
mmu05016  Huntington disease
mmu05017  Spinocerebellar ataxia
mmu05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    52639 (Wipi1)
   04136 Autophagy - other
    52639 (Wipi1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    52639 (Wipi1)
   05014 Amyotrophic lateral sclerosis
    52639 (Wipi1)
   05016 Huntington disease
    52639 (Wipi1)
   05017 Spinocerebellar ataxia
    52639 (Wipi1)
   05022 Pathways of neurodegeneration - multiple diseases
    52639 (Wipi1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    52639 (Wipi1)
   03029 Mitochondrial biogenesis [BR:mmu03029]
    52639 (Wipi1)
Membrane trafficking [BR:mmu04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    52639 (Wipi1)
Mitochondrial biogenesis [BR:mmu03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    52639 (Wipi1)
SSDB
Motif
Pfam: PROPPIN WD40 ANAPC4_WD40 DUF5711 BCAS3_WD40
Other DBs
NCBI-GeneID: 52639
NCBI-ProteinID: NP_666052
MGI: 1261864
Ensembl: ENSMUSG00000041895
UniProt: Q8R3E3
Position
11:complement(109464347..109502215)
AA seq 446 aa
MEAEAADAPPGRVEAALSCFSFNQDCTSLAIGTKAGYKLFSLSSVEQLDQVHGSNEIPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLEES
IYIHNIKDMKLLKTVLDIPSNPTGLCALSINHSNSYLAYPGSQSTGEIVLYDGNSLKTVC
TIAAHEGTLAAITFNSSGSKLASASEKGTVIRVFSVPEGQKLYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKMEHLTDSRPEEPSTWSGYMGKMFMAATNYLPAQVSDMMNQ
DRAFATGRLNFSGQKNICTLSTIQKLPRLLVASSDGHLYIYNLDPQDGGECVLIKTHSLL
SSGTTEENKENDLRPSLPPSYAATVARPSTSAASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGSQKGKTKQS
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggaggccgaagccgcagatgcccctccgggccgagtggaggcggcgctcagctgcttc
tctttcaaccaagactgcacatccctagcgattggaaccaaggccggttacaagctgttt
tctctgagttctgtggagcagcttgaccaagtccatggaagcaatgaaatccctgacgtg
tatatcgtggagcgcctcttctccagcagcctggttgtagtggtcagtcacacaaaacct
cggcagatgaacgtctaccatttcaagaaaggcactgagatctgtaattacagctactcc
agcaacattttgtctattcggctcaaccgacagaggctgctggtctgcctggaagaatcc
atctatatccacaacattaaggatatgaagttattgaagaccgtcctggatattccctca
aacccaacaggtctctgtgccctgtctatcaaccattccaactcttacctggcctatcct
ggaagccagagtacaggcgagattgtactctatgatggaaactccctgaaaacggtgtgc
accattgctgcccacgaggggacgctggccgctatcaccttcaactcctcgggctccaag
ctagcaagcgcgtctgaaaaaggcactgtcatccgagtgttctctgttcccgagggccag
aaactctatgagtttcgtcgaggaatgaaaaggtatgtgacaatcagctccctggtgttc
agtatggactcccagttcctgtgtgcctccagcaacacggagaccgtgcacatcttcaag
atggaacacctgacagacagccgcccagaagagccttccacctggagcggctacatggga
aagatgttcatggcagctaccaactacctccccgcccaggtgtcggacatgatgaaccag
gacagggctttcgccacaggacgcctgaacttctctgggcagaagaacatttgcaccctg
tccacgatccagaaactgccgcggttgctggtggcctcctccgacggacacctttacatc
tacaacttggacccacaggatggaggagaatgtgtcctaatcaaaacccacagcttgctt
agctcaggaacaacagaagagaacaaagaaaatgacctcagaccttccttacctccatct
tatgctgcaactgtagcaaggcccagcacgtctgcagcctccacggtgccaggatactct
gaggacggcggggcgctccgaggggaagttattccggaacacgagtttgcgacgggacca
gtgtgtctagacgacgagaatgagtttccccctataatcttgtgccgtggaagtcagaag
ggcaaaacgaagcagtcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (37)   
   RefSeq(nuc) (1)   
   GenBank (18)   
   EMBL (18)   
Protein domain (5)   
   Pfam (5)   
All databases (67)   

Download RDF
DBGET integrated database retrieval system