KEGG   Mus musculus (house mouse): 53319
Entry
53319             CDS       T01002                                 
Symbol
Nxf1, Mex67, Mvb1, Tap
Name
(RefSeq) nuclear RNA export factor 1
  KO
K14284  nuclear RNA export factor
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03008  Ribosome biogenesis in eukaryotes
mmu03013  Nucleocytoplasmic transport
mmu03015  mRNA surveillance pathway
mmu05014  Amyotrophic lateral sclerosis
mmu05164  Influenza A
mmu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    53319 (Nxf1)
   03015 mRNA surveillance pathway
    53319 (Nxf1)
   03008 Ribosome biogenesis in eukaryotes
    53319 (Nxf1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    53319 (Nxf1)
   05168 Herpes simplex virus 1 infection
    53319 (Nxf1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    53319 (Nxf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    53319 (Nxf1)
   03009 Ribosome biogenesis [BR:mmu03009]
    53319 (Nxf1)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     53319 (Nxf1)
   mRNA cycle factors
    Stress granule specific factors
     53319 (Nxf1)
Ribosome biogenesis [BR:mmu03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    53319 (Nxf1)
SSDB
Motif
Pfam: Tap-RNA_bind TAP_C NTF2 LRR_8 LRR_4 LRR_9 LRR_6
Other DBs
NCBI-GeneID: 53319
NCBI-ProteinID: NP_058093
MGI: 1858330
Ensembl: ENSMUSG00000010097
UniProt: Q99JX7
Position
19:8734467..8748274
AA seq 618 aa
MADEGKSYNEHDDRVSFPQRRKKGRGPFRWKCGEGNRRSGRGGSGVQSSRFEEDDGDVAM
NDPQDGPRVRYNPYTNRPNRRGDGWHDRDRIHITVRRDRAPAERGGAGTSQDGTTKNWFK
ITIPYGRKYDKTWLLSMIQSKCSVPFNPIEFHYENTRAHFFVEDATTASALKGVNHKIQD
RENRRISIIINASAPPYTVQNELKPEQIEQLKLIMSKRYDGNQQALDLKGLRSDPDLVAQ
NIDVVLNRRSCMAATLRIIEENIPELLSLNLSSNRLYKLDDMSSIVQKAPNLKTLNLSGN
ELKTERELDKIKGLKLEELWLDRNPMCDNFGDQSSYISAIRERFPKLLRLDGHELPPPIS
FDVEAPTMLPPCKGSYFGTENLKSLVLRFLQQYYVIYDSGDRQGLLYAYHDGACCSLSIP
YNPQNPVRKNLAEYVKDSRNVKKLKEPTQRFRLLKHTRLNVVAFLNELPKTQHDVNAFVV
DISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNSGLCIVNDELFVRNASP
EEIQRAFAMSAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQ
AFTLLKAKGEIPEVAFMK
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggcggacgaagggaagtcatacaacgagcatgatgaccgtgttagtttccctcaaaga
agaaagaaaggccgggggcctttccgatggaagtgtggtgaggggaatcgtaggtctgga
agaggtggttctggtgtacagtcttcccgatttgaggaagatgatggcgatgtagcaatg
aatgatccccaggatggcccccgagtaagatacaatccctataccaaccggcctaatcgt
cggggagatggttggcatgatcgagatcgaattcatattactgtacggagagacagagct
cctgcagagagaggaggggctggcaccagtcaagatgggaccaccaagaactggttcaag
attacaattccttatggtagaaagtatgacaaaacgtggcttctgagcatgattcagagc
aaatgcagtgtccccttcaatcccatcgagtttcactatgaaaatacacgggcccatttt
tttgtggaggatgccactactgcttctgcattaaagggtgtcaaccataagatccaggat
cgagaaaacagaaggatatctatcatcatcaatgcttctgctccaccctacactgtacag
aatgaactgaagcccgaacaaatagagcagctcaagctgatcatgagcaaacgatatgat
ggcaaccaacaagcacttgacctcaaggggctccgctcagacccagatttggtggcccag
aacatcgatgttgttctaaaccgcagaagctgtatggcagccaccctgcggatcattgaa
gagaacattcctgagctattgtctttgaacttgagcagcaacaggctatacaagctggat
gatatgtctagcattgtgcagaaggcgccaaacctaaagaccctaaatctctccggaaac
gaattgaagactgagcgggaattagacaagataaaagggctgaagctggaagagctgtgg
cttgacagaaaccccatgtgtgacaacttcggagaccagtccagctatatcagcgccatt
cgcgaacgatttcccaagttattacgcctggatggccatgagctaccccctccaatttcc
tttgatgtcgaagcccctacaatgttaccaccctgcaagggaagctattttggaaccgag
aacctaaagagtctggtcctgcgcttcttgcagcagtactatgtaatttatgactcagga
gaccgccagggtctcctgtatgcctaccatgatggcgcctgttgctcgctaagcattcct
tacaaccctcagaatcctgtccgaaaaaacttagctgaatatgtcaaagacagcagaaat
gtgaagaagcttaaagaacccacccagcggttccgactcttaaagcatacacgtcttaat
gtcgttgccttcctcaatgagttacccaaaactcaacatgacgttaacgccttcgtggta
gatataagtgcccaaacaagcacattactgtgtttttctgtcaatggagtcttcaaggaa
gtggatgggaagtctcgagattctttacgtgctttcacaagaacgttcattgctgttcct
gccagcaattcagggctatgtattgtaaatgatgaattatttgtgcggaatgccagccct
gaagaaatccaaagagccttcgccatgtctgcacccacaccttcctccagtccagtaccc
acgctttccccagaacagcaggaaatgttgcaagcattttctacccagtctggcatgaac
cttgagtggtctcagaagtgccttcaagacaataactgggactacaccagatctgctcag
gccttcactcttctcaaggccaagggagagattccagaagtagcgtttatgaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (34)   
   RefSeq(nuc) (2)   
   GenBank (16)   
   EMBL (16)   
Protein domain (7)   
   Pfam (7)   
All databases (70)   

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