KEGG   Mus musculus (house mouse): 53417
Entry
53417             CDS       T01002                                 
Symbol
Hif3a, Ipas, MOP7, NEPAS, bHLHe17
Name
(RefSeq) hypoxia inducible factor 3, alpha subunit
  KO
K09096  hypoxia-inducible factor 3 alpha
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    53417 (Hif3a)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    53417 (Hif3a)
SSDB
Motif
Pfam: PAS_3 PAS_11 PAS HIF-1 PAS_4 PAS_9 HLH PAS_2
Other DBs
NCBI-GeneID: 53417
NCBI-ProteinID: NP_058564
MGI: 1859778
Ensembl: ENSMUSG00000004328
UniProt: Q0VBL6
Structure
Position
7:complement(16764918..16796352)
AA seq 662 aa
MDWDQDRSNTELRKEKSRDAARSRRSQETEVLYQLAHTLPFARGVSAHLDKASIMRLTIS
YLRMHRLCAAGEWNQVEKGGEPLDACYLKALEGFVMVLTAEGDMAYLSENVSKHLGLSQL
ELIGHSIFDFIHPCDQEELQDALTPRPNLSKKKLEAPTERHFSLRMKSTLTSRGRTLNLK
AATWKVLHCSGHMRAYKPPAQTSPAGSPRSEPPLQCLVLICEAIPHPASLEPPLGRGAFL
SRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAVTG
QYRFLARTGGYLWTQTQATVVSGGRGPQSESIICVHFLISRVEETGVVLSLEQTEQHTRR
PPRLSASSQKGIPGNSVDSPAPRILAFLHPPALSEASLAADPRRFCSPDLRRLMAPILDG
PPPAATPSTPQATRRPQSPLPADLPDKLTVGLENAHRLSTAQKNKTVETDLDIAQDPDTL
DLEMLAPYISMDDDFQLNSSEQLPKVHRRPPRVARRPRARSFHGLSPPIPEPSLLPRWGS
DPRLNCSSPSRGDRPTASLMPGTRKRALAQSSEDKGLELLETKPPKRSPRLEPGSFLLPP
LSLSFLLQGRQLPGNQQDPRAPLVHSHEPLGLAPSLLSLCQHEETVQPRNRFPPAAGLGQ
TH
NT seq 1989 nt   +upstreamnt  +downstreamnt
atggactgggaccaagacaggtcgaacaccgagctgcggaaggagaagtcgcgggacgcg
gcccgcagccggcgcagccaggagacggaggtgctgtaccagctggcgcacactctgccc
tttgcgcgcggcgtcagcgcgcacctggacaaggcctccatcatgcgcctcacaatcagc
tacctgcgcatgcaccgcctctgcgcagcaggggagtggaaccaggtggaaaaaggggga
gagccactggacgcctgctacctgaaggccctggagggtttcgtcatggtactcaccgcc
gagggagacatggcttacctgtcggaaaatgtcagcaagcacctgggcctcagtcagctg
gagctcattggacacagtatctttgattttatccatccctgtgaccaagaggaacttcaa
gacgccctgacccccaggccgaacctgtcaaagaagaagctggaagccccaacagagcgc
cacttttccctgcgaatgaagagcacgctcaccagcagagggcgcacgctcaacctcaaa
gcggccacctggaaggtgctgcactgctcaggacatatgagggcctacaagccccctgca
cagacttcccctgccgggagccctcgctccgagcctcccctgcaatgcctggtgcttatc
tgtgaagccatcccccacccagccagtctggagcccccgctgggccgaggggcctttctc
agtcgccacagcctggacatgaagttcacatactgcgacgagaggattgcagaagttgct
ggctacagtcctgatgacctgattggctgttctgcctatgaatacatccacgctttggac
tctgatgcggtcagcaggagcatccacactttgttgagcaagggccaggcagtaacgggg
cagtatcgcttcctggcccggactggaggctatctgtggactcagactcaggctacagtg
gtgtcaggggggcggggcccccagtcggaaagtatcatctgcgtccacttcctgatcagc
cgtgtagaagagaccggagtggtgctgtctctggaacaaacggagcaacatactcgcaga
ccccctcggctgagtgcctcctcgcagaagggtatccctggcaacagtgtagactctcct
gctccgcggatcctggccttcctgcaccctccggccctgagtgaggcctccctggctgct
gaccctcgccgtttctgtagtccagacctgcgccgcctcatggcacccatcctggatgga
cctcccccagctgccacgcccagcaccccacaagctacacggagaccccaaagtcctctt
ccggctgatctcccagataagttgacagtgggcttggaaaatgcgcacagactctccact
gcccagaaaaacaagaccgtggagacagatctagatatagctcaggaccctgacactctg
gacttggagatgctggccccctacatctccatggatgatgacttccagctcaactccagc
gagcaattgcccaaagtccaccgcagacctcccagggtggcccgcaggccccgtgctcgg
agcttccatggcctgtcgcctcctatccctgagccctccctactaccccgctgggggagt
gatccacgactgaactgttccagtccttccaggggcgatcgccccacagcctccctgatg
cctggaactcggaagagggccttggcccagagctcagaggacaaagggttggagctgctg
gaaactaagccgcccaagcggtccccaagactagaacctggaagcttcctgctgcctccg
ctcagcctgagtttccttctgcaaggtcgacaactcccggggaaccagcaggatcccaga
gcccccctcgtgcattctcatgagcccttgggcctagctccctcgctgctctctctctgc
cagcatgaggaaactgtccagcccaggaaccgcttcccgccagcagcaggcttgggccag
acccactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (13)   
   RefSeq(nuc) (3)   
   GenBank (5)   
   EMBL (5)   
3D Structure (2)   
   PDB (2)   
Protein domain (8)   
   Pfam (8)   
All databases (56)   

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