KEGG   Mus musculus (house mouse): 53601
Entry
53601             CDS       T01002                                 
Symbol
Pcdh12, Pcdh14, VE-cad-2
Name
(RefSeq) protocadherin 12
  KO
K16499  protocadherin delta 2
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mmu04515]
    53601 (Pcdh12)
Cell adhesion molecules [BR:mmu04515]
 Cadherins
  Protocadherins
   53601 (Pcdh12)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_3 DUF5527
Other DBs
NCBI-GeneID: 53601
NCBI-ProteinID: NP_059074
MGI: 1855700
Ensembl: ENSMUSG00000024440
UniProt: O55134 Q8C883
Position
18:complement(38400145..38417454)
AA seq 1180 aa
MMLLLPFLLGLLGPGSYLFISGDCQEVATVMVKFQVTEEVPSGTVIGKLSQELRVEERRG
KAGDAFQILQLPQALPVQMNSEDGLLSTSSRLDREKLCRQEDPCLVSFDVLATGASALIH
VEIQVLDINDHQPQFPKDEQELEISESASLHTRIPLDRALDQDTGPNSLYSYSLSPSEHF
ALDVIVGPDETKHAELVVVKELDRELHSYFDLVLTAYDNGNPPKSGISVVKVNVLDSNDN
SPVFAESSLALEIPEDTVPGTLLINLTATDPDQGPNGEVEFFFGKHVSPEVMNTFGIDAK
TGQIILRQALDYEKNPAYEVDVQARDLGPNSIPGHCKVLIKVLDVNDNAPSILITWASQT
SLVSEDLPRDSFIALVSANDLDSGNNGLVHCWLNQELGHFRLKRTNGNTYMLLTNATLDR
EQWPIYTLTVFAQDQGPQPLSAEKELQIQVSDVNDNAPVFEKSRYEVSTWENNPPSLHLI
TLKAHDADLGSNGKVSYRIKDSPVSHLVIIDFETGEVTAQRSLDYEQMAGFEFQVIAEDR
GQPQLASSISVWVSLLDANDNAPEVIQPVLSEGKATLSVLVNASTGHLLLPIENPSGMDP
AGTGIPPKATHSPWSFLLLTIVARDADSGANGELFYSIQSGNDAHLFFLSPSLGQLFINV
TNASSLIGSQWDLGIVVEDQGSPSLQTQVSLKVVFVTSVDHLRDSAHEPGVLSTPALALI
CLAVLLAIFGLLLALFVSICRTERKDNRAYNCREAESSYRHQPKRPQKHIQKADIHLVPV
LRAHENETDEVRPSHKDTSKETLMEAGWDSCLQAPFHLTPTLYRTLRNQGNQGELAESQE
VLQDTFNFLFNHPRQRNASRENLNLPESPPAVRQPLLRPLKVPGSPIARATGDQDKEEAP
QSPPASSATLRRQRNFNGKVSPRGESGPHQILRSLVRLSVAAFAERNPVEEPAGDSPPVQ
QISQLLSLLHQGQFQPKPNHRGNKYLAKPGGSSRGTIPDTEGLVGLKPSGQAEPDLEEGP
PSPEEDLSVKRLLEEELSSLLDPNTGLALDKLSPPDPAWMARLSLPLTTNYRDNLSSPDA
TTSEEPRTFQTFGKTVGPGPELSPTGTRLASTFVSEMSSLLEMLLGQHTVPVEAASAALR
RLSVCGRTLSLDLATSGASASEAQGRKKAAESRLGCGRNL
NT seq 3543 nt   +upstreamnt  +downstreamnt
atgatgctacttctgccattcctgctagggctcttagggccaggaagctacttgttcatt
tcaggggattgtcaggaggtggccactgtcatggtgaaattccaagtgacagaggaagtg
ccgtctggcacggtgatagggaaactgtcccaagaactaagagtggaggagaggcgtggg
aaggcaggagatgccttccagattctgcagctgcctcaggcactgccggttcagatgaac
tctgaggacggcctgctcagcacttccagccggctggatcgggagaagctatgtcggcag
gaagatccctgtctggtgtcatttgacgtgcttgccacaggggcgtctgctctaattcat
gtggagattcaggtgctagacatcaatgaccaccagccacagtttcccaaagacgagcag
gaactggaaatctcagagagtgcctctctgcacacacgaatccccttggacagagctctt
gaccaagacacgggtcctaacagcttatattcctactccctgtctcccagtgaacacttt
gccctggatgttattgtgggccctgatgagaccaaacatgcagagcttgtggtggtgaag
gagttggacagggaactccactcatattttgatctggtgctgaccgcctatgacaatggg
aatccccctaagtcaggaatcagcgtggtcaaggtcaatgtcctggactccaatgacaat
agtccagtgtttgctgagagttcactagcactagaaatcccagaagacactgttcctggt
actcttctcataaacctgactgctacagatcccgaccaaggacccaatggggaggtagag
ttcttctttggcaagcatgtgtccccagaggtgatgaacacctttggcatagatgccaag
acaggccagatcattctgcgccaagccctagattacgagaagaaccctgcctatgaggtg
gatgtccaggcaagggatttgggtcccaattccatcccaggccattgcaaagttcttatc
aaagttctggatgtcaatgacaatgccccaagcatcctcatcacgtgggcctcccagacg
tcgctggtgtcagaagatcttcccagggatagcttcattgcccttgtcagtgcgaatgac
ttggactcaggaaacaacggtctcgtccactgttggctgaatcaagagctgggccacttc
agactgaaaaggactaacggcaacacgtacatgctgctcaccaatgccacactggacaga
gagcagtggcccatatatactctcactgtgtttgcccaagaccaaggaccccagccctta
tcagctgagaaggagctccaaattcaggttagtgatgtcaatgacaatgcccctgtgttt
gagaagagccggtacgaggtctccacttgggaaaataacccaccctctcttcacctcatc
acgctcaaagcgcatgatgctgacttgggcagtaatggaaaagtgtcataccgtatcaag
gactcccccgtttctcacttagtcattattgactttgaaacaggagaagtcactgctcag
aggtcactggactatgaacagatggcaggctttgagttccaggtgatagcagaggacaga
gggcaaccccagctcgcatccagcatctcggtgtgggttagcctcttggatgccaatgat
aatgccccagaagtgattcagcctgtgctcagtgaaggcaaagccaccctttcggtgctt
gtaaatgcctccacgggccaccttctgttgcccattgagaatcccagtggcatggatcca
gcaggtactggtataccaccaaaggctacccacagcccctggtctttccttttgttaaca
atcgtggctagggatgcagactcgggggccaatggggaactcttctacagcattcaaagt
gggaatgatgctcatctctttttcctcagcccttccttggggcagctattcattaatgtc
accaatgccagcagcctcatcgggagtcagtgggacctggggatagtggtagaggaccag
ggcagcccctccttgcagacccaagtttcattgaaggtcgtgtttgtcaccagtgtggac
cacctaagggattctgctcatgagcccggagttctgagcacaccagcactggctttgatc
tgcctggctgtactgctggccatctttggattgctcttagccctgttcgtgtccatctgc
aggacagagagaaaggataatagggcctacaactgtcgagaagctgagtcgtcataccgc
caccagcccaagaggccccagaaacacattcagaaggcagatatccacctggtgcctgtg
cttagggcccacgagaatgagactgatgaagtcaggccatctcacaaggataccagcaag
gagacactgatggaggcaggctgggactcttgcctgcaggcccccttccacctcacacca
accctatacaggaccctgcgtaaccaaggcaaccagggagaactggcagagagccaggag
gtactgcaggacaccttcaactttctctttaaccatcccaggcagaggaatgcctcccgg
gagaacctaaaccttcctgagtccccacctgctgtacgccaaccactcttaaggcctctg
aaggtgcctggtagccccatagcgagggcgactggagaccaagacaaggaggaggcccca
cagagcccaccagcgtcctctgcaaccctaagacgacagcggaatttcaatggcaaagtg
tctcctagaggagagtccggtcctcatcagattctgaggagcctggttaggctctctgtg
gctgcttttgcggaacggaacccggtggaggagcctgctggggactctcctcctgtccag
caaatctcccagctgctgtccttgctgcaccagggccaattccagcccaaaccaaaccac
cgaggaaataaatacttggccaagcccggcggcagcagcaggggtaccatcccagacaca
gagggccttgtaggcctcaagcctagtggtcaagcagaacctgacctggaagaagggccc
ccgagcccggaggaggacctttctgtaaagcgacttctagaagaagagctgtcgagcctg
ttggaccctaatacaggtctagccctggacaagctgagtccgcctgacccagcctggatg
gcgagattgtcattgcccctcaccaccaattaccgagacaacttgtcttcccccgatgct
acaacgtcagaggaaccgagaaccttccagacattcggcaagacagttggaccgggaccc
gagctgagcccaacaggcacgcgcctggccagcactttcgtctcggagatgagctctctg
ctggaaatgttgttggggcagcacacggtaccagtggaagctgcgtccgcggctttgcgg
aggctctcggtgtgcgggaggaccctcagtctagacctagccaccagtggggcctcagct
tcagaagcacagggtagaaagaaggcagctgagagcagacttggctgtggcaggaatcta
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (15)   
   RefSeq(nuc) (1)   
   GenBank (7)   
   EMBL (7)   
Protein domain (4)   
   Pfam (4)   
All databases (45)   

Download RDF
DBGET integrated database retrieval system