KEGG   Mus musculus (house mouse): 53867
Entry
53867             CDS       T01002                                 
Symbol
Col5a3
Name
(RefSeq) collagen, type V, alpha 3
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04820  Cytoskeleton in muscle cells
mmu04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    53867 (Col5a3)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    53867 (Col5a3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:mmu00536]
    53867 (Col5a3)
Glycosaminoglycan binding proteins [BR:mmu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   53867 (Col5a3)
SSDB
Motif
Pfam: Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1
Other DBs
NCBI-GeneID: 53867
NCBI-ProteinID: NP_001304317
MGI: 1858212
Ensembl: ENSMUSG00000004098
UniProt: Q9JLI2
Position
9:complement(20681353..20726363)
AA seq 1738 aa
MRSCRRLDQLQAGLCLLLASLQLVSWTLAEPVDVLEAWGVHRDQAGVAEGPGFCPLRIPQ
GDRAFRVGKSSLLSVPTWQLFPDGHFPENFSVLLTLRAQPANQSVLLSIYDEKGVRQLGL
ALGPALGLLGDSFRPLPKQVNIMDGRWHRVAVSISGNKVTLVVDCEPQPPTFGQGPRFIS
TAGLTVMGTQDTREESFEGDIQELLLIPDPQAAFQACESYLPGCETLDSTTTGAPKDDEP
ETPAPRRRKGKGKKKGRGRKGKGRKKNKETSELSPTPGAPENQTSLHIPETEKTVPHLPL
TPTPLAITTTVTIGQNATVSQGLDSGTETEQTTPEVDSTEEGEGGGPTMGPKFRAAEQSL
QTEFQIFPGAGEKGAKGEPATVEQGQQFEGPAGAPGPRGISGPSGPPGPPGFPGDRGLPG
PAGLPGIPGIDGARGLPGTVIMMPFHFASSSMKGPPVSFQQAQAQAVLQQAQLSMKGPPG
PVGLTGRPGPVGLPGYPGLKGELGEVGPQGPRGLQGPPGPPGREGKTGRAGADGARGLPG
DTGPKGDRGFDGLPGLPGEKGQRGDFGRVGQPGPPGEDGVKGLQGPPGPTGQAGEPGPRG
LIGPRGLPGPLGRPGVTGSDGAPGAKGNVGPPGEPGPPGQQGNHGSQGIPGPQGPIGTPG
EKGPPGNPGIPGVPGSEGPPGHPGHEGPTGEKGAQGPPGSAGPRGYPGLRGVKGTSGNRG
LQGEKGERGEDGFPGFKGDEGPKGDRGNPGPPGPRGEDGPEGQKGPGGLPGDEGPPGAAG
EKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPLGEKGKRGKAGQPGEEGERGTPGTRGDRG
QPGATGQPGPKGDVGQNGSPGPPGEKGLPGLQGPPGFPGPKGPPGPQGKDGISGHPGQRG
ELGFQGLTGPPGPAGVLGPQGKVGDVGPLGERGPPGPPGPPGEQGLPGIEGREGAKGELG
PLGSVGKEGPPGPRGFPGPQGAPGDPGPIGLKGDKGPPGPVGANGSPGERGPVGPSGGIG
LPGQSGGQGPIGPAGEKGSPGERGTPGPTGKDGIPGPPGLQGPSGAAGPSGEEGDKGEVG
MPGHKGSKGDKGDAGPPGPTGIRGPAGHSGLPGADGAQGRRGPPGLFGQKGDDGVRGFVG
VIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRGPPGPSGSEGPPGLPGGVGQPGAVG
EKGEPGDAGDAGPPGIPGIPGPKGEIGEKGDSGPSGAAGPPGKKGPPGEDGSKGNMGPTG
LPGDLGPPGDPGVPGIDGIPGEKGNAGDIGGPGPPGASGEPGARGLPGKRGSPGRMGPEG
REGEKGAKGDAGPDGPPGRTGPIGARGPPGRIGPDGLPGIPGPVGEPGLLGPPGLIGPPG
PLGPPGLPGLKGDAGPKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQGPPGLQGDPGLPG
PVGSLGHPGPPGVVGPLGQKGSKGSPGSLGPRGDPGPAGPPGPPGSPAEVHGLRRRRSVT
DTLEGGLEEVMASLNSLSLELQQLQRPLGTAESPGLMCRELHRDHPHLPDGEYWIDPNQG
CARDAFKVFCNFTAGGETCLYPDKKFETVKLASWSREKPGGWYSTFRRGKKFSYVDADGS
PVNVVQLTFLKLLSAAAHQRFTYICQNSVAWLDEAAGDHRHSIRFQGTNWEELSFNQTTA
ATIKVSHDGCRVRKGQAKTLFEFSSSVGFLPLWDVAASDFGQTNQKFGFELGSICFSS
NT seq 5217 nt   +upstreamnt  +downstreamnt
atgagaagctgccggagactggatcagcttcaggccggcctctgcctgctcctggcctcc
ctgcagctcgtgtcctggacgctggctgaacctgtggacgtactggaagcctggggtgtg
catagagaccaggctggggtggctgaagggcctggcttctgccccctgaggattccacag
ggtgaccgagcattcagggtgggcaagtccagccttctcagtgtccccacgtggcagctc
ttcccagatgggcattttcctgagaacttttctgtgctgctcacactgagggcccagcca
gccaatcagtctgtccttctgtctatttatgatgagaagggtgtccggcagctggggctg
gcactggggccagctctgggcctccttggtgactccttcaggcccctccccaagcaagtc
aacattatggatggcaggtggcaccgtgtggcagtcagcatcagtggtaacaaggtgacc
ctggtggttgactgtgaaccgcagcccccaacatttggtcaggggcctcggtttataagt
acagctggactcactgtgatgggaacccaggacaccagggaagagtcttttgagggagac
atccaggagctgctgttaattccagaccctcaggctgccttccaggcctgtgagagctac
ctccctggttgtgaaaccctcgattccacaaccacaggggcccccaaagacgatgaacca
gaaacccctgcccctcgtcgtcgaaagggcaaagggaagaaaaaagggcggggtcgaaag
ggcaagggaagaaagaaaaacaaggagacctcagagctgagtccgacccctggtgcccct
gagaaccagacctccctccacatccctgagacagagaagacagttccccacctgcctctg
actcccacacctctggccatcaccaccactgtcacgattggacaaaatgccacagtctcg
caggggttggactccggtactgaaaccgagcagacgactccagaggtggactctactgag
gagggtgaaggaggtggccccaccatgggccccaagttccgggcagcagagcagtcctta
cagactgagttccagatctttcctggtgctggagaaaagggagcgaaaggagagcctgcg
acagtagagcagggacagcagtttgaggggcctgcaggagctccaggaccccggggaata
tctggtccttcaggccctcctgggcctccgggcttccctggggaccgtggtctaccgggt
cctgccggcctcccaggaatcccaggcatcgatggagcccggggcctgccgggcacagtg
attatgatgccgttccattttgcaagcagctcgatgaagggacccccagtgtccttccag
caggcccaggcccaggcagtattgcaacaggctcagctgtccatgaaagggccccctggt
ccagtagggctcactgggcgcccaggccctgtgggcctccctggatatccaggtctgaaa
ggtgaactgggagaagtggggccacagggcccccgaggattacagggccctcctgggcct
cctggacgggaaggcaagacaggccgagctggagcagatggggctcgggggctcccggga
gacacaggacctaagggtgacaggggctttgatggcctgcccgggctgcctggtgagaag
ggccaaaggggtgactttggacgagtagggcaacctggtcccccaggagaggatggtgta
aagggcctgcagggacctccagggcccactggccaggctggagagccgggtccccgaggt
ctgattggccccagaggtctcccaggtcccctaggacgcccgggtgtgacagggagtgat
ggcgcaccaggggccaaaggcaacgtgggtcctcctggagaaccaggacccccaggacag
caaggaaaccacggctcccagggaattccaggcccccaggggcccattggcactcccggg
gaaaagggtccccctggaaaccccggaattccaggtgtcccaggatctgagggccccccg
ggccacccaggccacgagggtcccacaggagaaaaaggggctcagggcccaccaggatca
gcaggccctcggggctatcctggacttcgtggtgtgaagggtacctctggtaaccggggt
ctccaaggcgagaaaggagaaaggggagaggatggctttcctggcttcaagggtgatgag
ggaccaaaaggcgaccggggaaaccccggacccccaggtcccagaggagaggatggtcca
gaaggacaaaaggggcctgggggactgcctggtgatgagggtcctccaggagcagcaggg
gagaagggcaagcttggggtgccaggtctcccaggttatccaggacgcccaggacctaag
ggatctattggatttcctggacccttgggaccactgggggagaaaggcaagcggggcaaa
gcaggacagccaggagaggaaggagaacgcggcacaccgggcacccgaggagacagggga
cagccgggggccacaggccagcctggccccaagggtgacgtgggccagaatgggtctcct
gggccccctggagaaaagggtctacccggtcttcaaggcccaccaggattccccggacca
aaaggccccccgggtcctcaggggaaagatgggatatctgggcaccctggacaaagagga
gaattgggcttccaaggtctgacaggcccccctggaccagctggcgtccttggtcctcag
ggaaaggtaggggacgtggggcctctaggcgagagaggccccccagggcctcctggacct
cctggtgaacaaggtctgccaggcatagaaggcagagaaggggccaagggtgagctagga
cccctggggtccgtcgggaaggaggggccacctgggcccaggggcttccctggcccccaa
ggagcccccggagacccaggacccattggtttgaagggtgacaaaggtcccccaggccct
gttggggcaaatggctccccgggagagcgtggtcctgtaggcccctctggtggcattggg
cttcctggccagagtggagggcaaggccctattggtcctgctggcgagaaggggtccccg
ggagaacggggtactcctggtcctactggcaaagatggtattccaggacccccggggctt
cagggcccctctggagctgcggggccttctggggaagaaggagacaagggggaagtaggg
atgcctggtcacaaaggaagcaaaggggataaaggagatgcaggcccacctggaccaaca
ggaataagaggtccagcaggccattcaggcctcccgggtgctgatggcgctcagggtcgc
cggggaccccctggcctcttcgggcagaagggggatgacggagttcgaggctttgtaggt
gtaattggtcctccaggtctgcaggggctgccgggtcctccgggggagaagggcgaggtt
ggagacgtaggatccatgggtccacatggagctccaggccctcggggtccccctgggccc
agtggatcagagggccccccaggtctgcctggaggagtaggacagcctggtgctgtgggc
gagaagggtgagccaggggatgctggagacgccggacccccaggaattcccggcatccct
gggcccaaaggtgaaattggtgaaaagggggattcgggtccatcaggggctgctggtccc
ccaggcaagaaaggacccccaggagaggacggctctaaggggaacatgggtcccacagga
ctccctggagatctagggcccccaggagaccctggagttccgggtattgatggcatccca
ggggagaagggaaatgctggtgatattgggggaccggggccacctggagcttccggggaa
cctggtgcccgtggcctccctggcaagaggggttcccctggccgcatgggtccagaagga
agagagggcgagaaaggcgccaagggagatgctggtcctgatggacccccaggcaggaca
ggccccattggggctcgagggccccctggacgaattgggcctgatggtcttccagggatc
cctggtcctgtgggtgaaccaggtctcctgggacctcctgggctaatcggccctccaggg
cccctgggcccacctggcctccctggcctgaagggagatgctggccccaagggggagaag
ggccacattgggctaataggcctcattggtcccccaggggaggccggtgagaaaggcgat
caggggttgccaggtgtgcagggccccccaggccttcagggagaccctggtctccctggt
cctgttggctcgttaggtcaccctgggcccccaggtgtggtgggccctctgggacagaag
ggctccaaagggtccccgggatctcttggtcctcgtggagaccctggaccagcgggtcct
cctggtcccccgggttctccggctgaggtgcatggcctgcgcaggcgccgatctgtgacg
gacaccctggaaggtggcctggaggaggtgatggcctcactgaattcactgagcttggag
ctgcagcagttgcagagacctctgggcacagccgagagcccaggcctcatgtgccgagag
cttcaccgcgaccacccacacctgcccgatggagagtactggattgaccccaatcagggc
tgtgcacgtgacgccttcaaggttttctgcaacttcacggcaggaggtgagacctgtctc
tatccagacaagaagtttgagacggtgaaactggcctcgtggtcccgagagaagcctgga
ggctggtacagcaccttccgccgagggaagaagttctcctatgtggatgctgatggctcc
ccggtgaatgtggtccagttgaccttcctgaagttgttgagtgctgcagcccatcagagg
ttcacttacatctgccagaactcggtggcatggctggatgaagctgcgggtgaccacagg
cactccatccgcttccaagggaccaactgggaagagttgtccttcaaccagacaacagca
gctaccatcaaggtctcccatgatggctgtcgggtccggaagggacaggcgaagaccctc
tttgaattcagctcttctgtgggtttcctgcctctgtgggatgtggctgcctctgacttt
ggtcagacgaaccaaaagtttgggtttgaactcggctccatctgctttagcagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (22)   
   RefSeq(nuc) (2)   
   GenBank (10)   
   EMBL (10)   
Protein domain (5)   
   Pfam (5)   
All databases (80)   

Download RDF
DBGET integrated database retrieval system