KEGG   Mus musculus (house mouse): 53870
Entry
53870             CDS       T01002                                 
Symbol
Cntn6, NB-3
Name
(RefSeq) contactin 6
  KO
K06764  contactin 6
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mmu04515]
    53870 (Cntn6)
Cell adhesion molecules [BR:mmu04515]
 Immunoglobulin superfamily
  Contactins
   53870 (Cntn6)
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 fn3 V-set C2-set_2 V-set_CD47 Sp38 Pur_ac_phosph_N Ig_4 Tissue_fac
Other DBs
NCBI-GeneID: 53870
NCBI-ProteinID: NP_059079
MGI: 1858223
Ensembl: ENSMUSG00000030092
UniProt: Q9JMB8
Structure
Position
6:104469566..104840367
AA seq 1028 aa
MRLLWKLVILLPLINSCAGEGRFSRPIFIQEPQDVIFPLDLSRSEIILTCTANGYPSPHY
RWKQNGTDIDFGMTYHYRLDGGSLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAY
IEDFETKTRSTVSVREGQGVVLLCGPPPHFGELSYAWTFNDSPLYVQEDKRRFVSQDTGN
LYFAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQAA
KDSSIKLECFALGNPVPDISWKRLDGSPMPGKIKYSKSQAILEIPKFQQEDEGFYECIAG
NLRGRNLAKGQLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNGQRLNT
EERIQIENGTLIITMLNISDSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPIKKISV
VQVGGDISIECKPNAFPKASISWKRGTENLKQSKRVLFLEDGSLKICNVTRADAGSYTCV
ATNQFGNGKSSGGLVVKERTIITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGD
IIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPGP
PEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVATVPEILNGQTYNA
TVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSRSELVIT
WEAIPEELQNGEGFGYIVMFRPVGTTAWMKERVALVESSKFIYRNESIMPLSPFEVKVGV
YNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEV
LYWTDNSKESMIGKIRVSGNVTTKNITGLRANTIYFASVRAYNTAGTGPSSLPVNVTTKK
SPPSQPPANIAWKLSNSKLCLNWEHVKTMENESEVLGYKILYRQNRQSKTHILETNNTSA
ELLVPFEEDYLIEIRTVSDGGDGSSSEEIRIPKMSSLSSTGVQISKPSTQSLSMVGVFYC
FAIHPLSR
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgaggttgctatggaaactggtaattctgctgccactcataaactcttgtgcaggtgag
ggtcgtttcagccgtcctatttttatccaggagccacaagatgtcatttttcctttggat
ttatctagatctgaaattattctgacttgtactgcaaatggatacccttctccccattac
aggtggaaacagaatggtacagatattgacttcggcatgacttatcactataggttggat
ggaggcagtttggccatcagcagccccagaacagatcaagatattggcatataccagtgt
ctggccaccaatcctgtgggcaccattctgagtagaaaagccaagctacagtttgcatat
attgaagactttgaaaccaaaaccagaagcacagtatctgtccgagaaggtcaaggagtg
gtactactctgtggcccaccaccacattttggagaattatcatatgcctggaccttcaat
gatagccctttgtatgttcaagaggacaagcgaagatttgtatctcaagacacagggaac
ttgtactttgccaaagtagaaccatctgatgtgggcaattatacttgctttgtcacaaac
aaagaggcccatagaagtgtccaaggtccacctacgcctttagtgctgcgcactgatggt
gtcatgggggaatatgagccaaagattgaagtgcgttttcctgaaacaatacaagctgca
aaggattcatctataaaactggaatgctttgcccttggaaatccagtccctgatattagt
tggaaaaggttggatggaagcccgatgccagggaaaatcaagtacagcaaatcccaagct
atccttgaaatccccaagttccaacaagaggatgaaggcttctatgaatgcatcgcaggt
aaccttcgaggaagaaaccttgcaaagggtcaactaattttctatgctcccccagaatgg
gaacagaaaatccaaaacacatacctttctatctatgacagcttgttttgggaatgcaaa
gctagtggaaatccaaatccttcgtacacgtggctaaagaatggtcaacgtctcaacaca
gaagaaagaattcagattgaaaatgggactcttatcatcaccatgctgaacatttcagac
tctgggatctaccagtgtgctgcagaaaacaaatatcagacaatttatgcaaatgcagaa
ttgagagttttagcctcagctccagatttctccaaaaatcccattaaaaaaatttcagtt
gttcaagttggtggtgatatttctattgaatgcaaaccaaatgctttccccaaagcatcg
atttcctggaaaagaggaacagagaacctgaaacaaagtaaaagagttcttttcttggag
gatggcagccttaagatatgcaatgttaccagagcagatgctgggtcttacacctgtgta
gctacaaatcaatttggcaatgggaaaagcagtggaggtctcgtcgtgaaagagagaacg
atcattacagtaccaccatctaaaatggatgttacagttggagagagcatcgtcttaccc
tgccaagtgtctcatgaccccaccatggaagttctatttgtttggtactttaatggagat
attatagatttaaagaaaggagtagcccattttgaacgaattgggggagaatctgttggg
gatttgatgataaggaatattcaattaggccattcgggaaaatatctatgcacagtacaa
acaacactagaacgcttgtctgctgtagctgatatcattgtgagaggtcccccagggccc
ccagaggatgtaaaagtggagcacatctctagtacgacctcccagctcagctggagacca
ggtcctgataataacagccccattcaaatttttactattcaaactcggacacccttttct
gtgggctggcaagcggttgctacagtccctgaaattctcaatggacagacatacaatgca
acagtcgttggtttgagtccttgggtggaatacgaatttcgtgttgttgctgggaacaac
attggaattggagagccaagcaaaccatcagagctgctgagaaccaaagcatcagtcccc
aatgtggcaccaggaaatatcaatggaggcggtggaagcagatcggaacttgtcattacg
tgggaggccattcctgaagaactacagaatggagaggggtttggatatatcgtcatgttt
cggccagtaggcacaaccgcctggatgaaagaaagggtggctcttgtagaatcatccaag
ttcatctatagaaatgaaagcatcatgcctctgtctccctttgaagtcaaagtgggagtg
tacaataatgaaggagagggatccctgagtactgtgaccattgtctactctggggaagat
gagcctcagctggccccaagaggaacttctgtccagagtttttctgcttctgaaatggag
gtttcctggaatgctattgcttggaatagaaacactggaagagtgctaggctatgaggtc
ttatactggacagacaactccaaagaatctatgattggtaaaattagagtcagtggaaat
gtcacaaccaagaacatcacaggactaagagctaatacgatttactttgcctctgtgaga
gcctataacactgcagggactggaccctcaagtctgccagttaatgtcaccaccaaaaag
tcccctcctagccaaccaccagcaaacattgcctggaagctgtcaaattctaaattatgc
ttgaactgggagcatgtaaaaaccatggaaaatgagtctgaagtgctgggctacaagatc
ctctatcggcagaaccgacagagtaaaactcatattttggaaacaaataatacatctgct
gaactcctggttccatttgaagaagactatttgattgaaatcagaacagtcagtgatggt
ggagatggaagcagcagtgaggaaatcagaattccaaaaatgtcaagtttgagttccaca
ggagttcagatctcgaagcccagcacccagtccctgtcaatggttggggttttttactgt
tttgctattcacccactttcgagatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (26)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (24)   
DNA sequence (36)   
   RefSeq(nuc) (28)   
   GenBank (4)   
   EMBL (4)   
3D Structure (2)   
   PDB (2)   
Protein domain (12)   
   Pfam (12)   
All databases (100)   

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