KEGG   Mus musculus (house mouse): 53885
Entry
53885             CDS       T01002                                 
Symbol
Nphp1
Name
(RefSeq) nephronophthisis 1 (juvenile) homolog (human)
  KO
K19657  nephrocystin-1
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mmu03037]
    53885 (Nphp1)
Cilium and associated proteins [BR:mmu03037]
 Primary cilia and associated proteins
  Nephronophthisis-related proteins
   53885 (Nphp1)
SSDB
Motif
Pfam: SH3_1 SH3_2 SH3_9 SH3_3 DUF6100
Other DBs
NCBI-GeneID: 53885
NCBI-ProteinID: NP_058598
MGI: 1858233
Ensembl: ENSMUSG00000027378
UniProt: Q9QY53 Q3TWM5 A2APS1
Position
2:complement(127582652..127630833)
AA seq 691 aa
MLARRPRDPLQALRRRGQELKLQVDSLVTESQLTGALEPSKRREIYQRCIQLKQAVDENK
NTLQKLNKADEAAPVGNYEQRKEEEHSLLEKLACQLQELAVSISRKDALKVEAHSDKEED
DTTEDDEEETGGEEEESEGDGEGKQEQASPKQAETETVTYIALGDFAAQQTGDLTFKKGD
VLHIIEKKPDGWWLAKDAEGVEGLIPRTYLEPYNKEDKLESSEGSEEGGEEDGEEDGEED
VEVVDETADGAQVKQRTDSHWSAVRKAISEQINTVDVLATMGAIPAGFRPSTLSQLLDEA
GNQFRASYFLQPELTTSQLAFRDLTWDAKAGTIMSRPSRVSLILTLWSCKMIPLPGTSIQ
VLSRHIRLCLFDGSKVLSNIHTVRAVWQPKKPKTWTFSPQVTGILPCLLDGDCFIRSNSS
TPDLGILFELGISYIRNSTGERGELSCGWVFLKLFDASGVPIPAKTYELFLNGGTPYEKG
VEVDPSVSRRAQGSVFRQMISVRRQPQLLVKLRSLNRRSRAMLSLLPETLVGSMCSAHLL
IFYRQILGDVLLRDRTNLQSADLISHPVLATFPLLLEQPDVMDALRSSWSEKESTLKRAE
KRDKELLKAEFLLVYHDCVLPLLHSTLLPPFRWAEEETEAARWKAIADFLKQSRENEGSL
KALLSPDGVHKPFDLSEQTFDFLGEIRKNSG
NT seq 2076 nt   +upstreamnt  +downstreamnt
atgctcgcccggcggccgcgggacccgctgcaggcgctgaggcgccgcgggcaggagctg
aagctgcaggttgatagtttggtgactgaaagccaactaacaggtgctctggaaccgagt
aaaaggagagagatttaccaaagatgtatccagttaaaacaggcagtagatgaaaataaa
aacacccttcaaaaattaaacaaagctgatgaagctgcacctgtggggaactatgagcag
aggaaggaggaggaacacagccttctggagaagctagcctgccagctgcaggagcttgcc
gtgagcatcagcaggaaagacgctctcaaagttgaggcacacagtgacaaggaggaagat
gacacgactgaagatgatgaagaagaaactggtggagaggaagaagagtcagaaggggat
ggagaaggaaagcaagagcaagcctccccgaaacaagcagaaacagaaactgtcacatac
atcgctcttggggacttcgctgctcagcagactggggacttgacctttaagaaaggggac
gttctccatataattgaaaagaagcctgatggttggtggctggctaaggatgctgaagga
gttgagggtctcattcccaggacctacttggagccctataataaagaagacaagctggag
tcaagcgaaggcagcgaggagggcggtgaggaggacggtgaggaggacggtgaggaggac
gtggaggtggtggatgaaactgcagatggagcccaggtgaagcagagaactgattcccac
tggagtgctgtacgaaaagctatctcagagcagataaataccgttgatgtgttagccaca
atgggagccattcctgcaggattccggccttccacgctctcccagctgctggatgaagca
gggaaccagtttcgagcaagttacttcttgcagccagagctcacgacatcgcagctggcc
ttcagagatctaacatgggatgctaaggcaggcacgatcatgtcgagaccaagtcgtgtt
tcattgattctgaccctatggagctgtaaaatgatccctctcccaggaacaagcatacag
gttctcagcagacacatccgcctctgcctgtttgacggcagcaaggtcctgagtaatatc
catacagttcgagccgtgtggcagcctaagaagccaaaaacatggaccttctctcctcag
gtcactggcatcttgccatgcttgctcgatggtgactgttttatcaggtccaattcttca
actccagaccttgggatattatttgaacttggaatttcttacattcgcaattcaactggt
gagagaggagagttaagctgtggctgggtgtttcttaagcttttcgatgccagtggagtt
cctattccagcaaaaacatacgaactcttcttgaatggcggcactccttacgaaaaaggt
gttgaagtggacccttcagtgtccagaagagcacagggcagtgttttccgtcagatgata
agtgtgcgcaggcagcctcaacttctggtgaaacttcggtctctgaacaggaggtccagg
gccatgctcagtctgctgccagaaaccctggtggggagtatgtgctctgctcacttactg
atattttaccgacaaattcttggagatgtgctcctgagagacaggacaaacctgcaaagt
gccgatttaatcagtcatcccgtgctggccaccttccctctgctcctggagcagcccgac
gtgatggatgctctcaggagttcctggtctgagaaagaaagtacactaaagcgagcagag
aagagagacaaagagctcctaaaggctgagttcctcctggtctaccatgactgcgtgctc
cctcttctgcactcgacactgctgcccccctttaggtgggccgaggaagagacagaggct
gcaagatggaaagccattgctgacttcctcaagcagagccgggagaacgagggttccctg
aaggctctgctgtcaccagatggagttcacaaaccatttgacctttcggagcagaccttt
gacttcttgggtgaaataagaaagaactcaggctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (19)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (15)   
DNA sequence (45)   
   RefSeq(nuc) (15)   
   GenBank (15)   
   EMBL (15)   
Protein domain (5)   
   Pfam (5)   
All databases (89)   

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