KEGG   Mus musculus (house mouse): 53975
Entry
53975             CDS       T01002                                 
Symbol
Ddx20, GEMIN3, dp103
Name
(RefSeq) DEAD box helicase 20
  KO
K13131  ATP-dependent RNA helicase DDX20 [EC:3.6.4.13]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    53975 (Ddx20)
Spliceosome [BR:mmu03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    53975 (Ddx20)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19
Other DBs
NCBI-GeneID: 53975
NCBI-ProteinID: NP_059093
MGI: 1858415
Ensembl: ENSMUSG00000027905
UniProt: Q9JJY4
Position
3:complement(105585586..105595104)
AA seq 825 aa
MAAAAFEVPAALTTSESTMAAERAAAPVQAVEPTPASPWTQRTAHDIGGPRTRTGDVVLA
EPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTI
ALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLK
KCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQM
LAVSATYPEVLANALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQH
LQELFSKVPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFH
CRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEE
NMMMKIAQKCNINLLPLPDPIPPGLMEECLNWDVEVKAAMHTYSSPTVATQSPKKQVQKL
ERAFQSQRTPGNQTPSPRNTSASALSARPKHSKPKLPVKSHSECGVLEKAAPPQESGCPA
QLEEQVKNSVQTSVEDSSSNSQHQAKDSSPGSLPKIPCLSSFKVHQPSTLTFAELVDDYE
HYIKEGLEKPVEIIRHYTGPEAQTGNPQNGFVRNRVSEDRAQMLVSSSQSGDSESDSDSC
SSRTSSQSKGNKSYLEGSSDTQLKDTECTPVGGPLSLEQVQNGNDTPTQVEYQEAPETQV
KARHKEGANQRSKQSRRNPARRSSYRVQSEPQEESWYDCHRETTASFSDTYQDYEEYWRA
YYRAWQEYYAAASHSYYWNAQRHPSWMAAYHMNTVYLQEMMRGNQ
NT seq 2478 nt   +upstreamnt  +downstreamnt
atggcggcggcggcgtttgaagtcccggcggccttgacaacctccgagtccactatggct
gcggagcgtgcggccgcgccggtgcaggctgtggagccgactccggcatccccgtggacc
cagcggaccgcacacgacatcggcgggccgcgcacacgtaccggggacgtggtgctggcg
gagcccgcggacttcgagtcgctgctgctgtcgcgaccggtgctggagggtctgcgggcg
gccggcttcgagagaccctctccggtgcagctcaaggccatcccgttggggcgctgcggg
ctcgatttaattgtccaagctaagtcgggcactggaaaaacttgtgtattctccaccatt
gctctggactctctgattcttgaaaactatagtactcagattttgatattggctcccaca
agagaaattgctgttcagatacactcggttatcacagccattggaataaaaatggaagga
ttagaatgtcatgtctttattggagggactccattatcacaagacaaaaccagacttaaa
aagtgtcatattgctgttggatctcctggtagaattaaacagctcatagaacttgactac
ctgaatccgggcagtatccgtctctttattcttgatgaagcagataagcttttagaagaa
ggcagtttccaggagcaaataaattggatttactcctctttacctgcgagtaagcagatg
ttggcagtatctgctacttaccctgaagttttggctaatgctttgacaaggtatatgaga
gatcccacttttgtaagattgaatcccagcgatccaagtctcataggtttgaagcagtac
taccaagttgtcaattcttaccctttggctcataagatttttgaggaaaagactcagcac
ttacaggaactttttagtaaagtcccatttaatcaagccttggtgttttctaatttgcac
agcagagctcaacatttggctgatatcctttcttctaaaggttttcctactgaatgcatt
tcaggtaacatgaatcagaatcagcgccttgatgctatggctaaactgaagcagtttcat
tgcagagtcctcatttctacagacttgacgtcccgtgggattgacgcagagaaggtgaat
ctagttgtaaatctcgatgtgccgttagactgggagacttacatgcatcggattggcaga
gctggccgttttggtacattgggactgacagtgacctactgttgtagaggagaagaagaa
aatatgatgatgaaaattgctcagaaatgtaatatcaaccttcttcctttaccagatcct
attcctcctggcctgatggaagaatgcttgaattgggatgtggaagttaaagctgccatg
catacttacagctcaccaactgtagctactcagtcccccaaaaagcaagttcaaaaacta
gagagagccttccagtctcaaagaacgcctgggaaccaaacgccttcccctagaaatact
tctgcatctgcactgtcagccaggccaaagcacagcaaaccaaagcttcctgtgaaaagc
cactcagagtgtggagtcctagaaaaggcagctccaccacaagagtcgggctgtcccgca
cagctggaagagcaagttaagaattctgttcagacctctgttgaggattcctccagtaac
agccagcatcaggccaaagatagctcacctgggtcactccctaaaatcccttgtctgtct
tcttttaaagtccatcagccgtctactttgacttttgcagaactggtagacgattatgag
cactatattaaagaggggttagagaaacctgtggaaattatccggcactacacagggcct
gaggcccagaccgggaatcctcagaatggctttgtgagaaatagagtttctgaagataga
gcacagatgttggtgagtagtagccagtctggagactcagagagtgacagcgattcttgc
agctcaaggacttcttcccagagcaaaggtaataagtcttacttggaaggctcctcagac
actcagttgaaagacactgaatgtactcctgtgggtggccctctctctctggaacaagtt
cagaatggaaatgataccccgactcaagtggagtatcaagaagcccctgaaacccaggta
aaggcaaggcataaagaaggcgctaaccaaaggtctaagcaaagtcggagaaacccagca
cggcgttcttcttaccgagtacagtcagaaccccaggaagagagttggtatgactgtcac
agggaaacaactgcaagtttttctgatacttaccaggattatgaggagtactggagagcg
tattacagggcatggcaagagtattatgctgctgcttcccattcatactattggaatgct
cagagacatccaagctggatggctgcctatcatatgaatacagtttatctacaagagatg
atgcgtggtaaccaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (18)   
   RefSeq(nuc) (2)   
   GenBank (8)   
   EMBL (8)   
Protein domain (4)   
   Pfam (4)   
All databases (50)   

Download RDF
DBGET integrated database retrieval system