KEGG   Mus musculus (house mouse): 545486
Entry
545486            CDS       T01002                                 
Symbol
Tubb1, 2810484G07Rik, M(beta)1
Name
(RefSeq) tubulin, beta 1 class VI
  KO
K07375  tubulin beta
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04145  Phagosome
mmu04540  Gap junction
mmu04814  Motor proteins
mmu05010  Alzheimer disease
mmu05012  Parkinson disease
mmu05014  Amyotrophic lateral sclerosis
mmu05016  Huntington disease
mmu05020  Prion disease
mmu05022  Pathways of neurodegeneration - multiple diseases
mmu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    545486 (Tubb1)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    545486 (Tubb1)
  09142 Cell motility
   04814 Motor proteins
    545486 (Tubb1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    545486 (Tubb1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    545486 (Tubb1)
   05012 Parkinson disease
    545486 (Tubb1)
   05014 Amyotrophic lateral sclerosis
    545486 (Tubb1)
   05016 Huntington disease
    545486 (Tubb1)
   05020 Prion disease
    545486 (Tubb1)
   05022 Pathways of neurodegeneration - multiple diseases
    545486 (Tubb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    545486 (Tubb1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mmu04812]
    545486 (Tubb1)
   04147 Exosome [BR:mmu04147]
    545486 (Tubb1)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     545486 (Tubb1)
Cytoskeleton proteins [BR:mmu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    545486 (Tubb1)
Exosome [BR:mmu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   545486 (Tubb1)
  Exosomal proteins of colorectal cancer cells
   545486 (Tubb1)
  Exosomal proteins of bladder cancer cells
   545486 (Tubb1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_2 Tubulin_3 ART
Other DBs
NCBI-GeneID: 545486
NCBI-ProteinID: NP_001074440
MGI: 107814
Ensembl: ENSMUSG00000016255
UniProt: A2AQ07
Position
2:174292388..174300173
AA seq 451 aa
MREIVHIQIGQCGNQIGAKFWEVIGEEHGIDCAGSYCGTSALQLERISVYYNEAYGKKYV
PRAVLVDLEPGTMDSIRSSRLGVLFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVMDVV
RRESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRILNSFSVMPSPKVSDTVV
EPYNAVLSIHQLIENTDACFCIDNEALYDICFRTLRLTTPTYGDLNHLVSLTMSGITTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNIM
AACDPRRGRYLTVACIFRGKMSTKEVDQQLLSIQTRNSNCFVEWIPNNVKVAVCDIPPRG
LNMAATFLGNNTAIQELFTRVSEHFSAMFRRRAFVHWYTSEGMDISEFGEAESDIHDLVS
EYQQFQDVRAGLEDSEEDVEEAEVEAEDKDH
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagagagatcgtgcacatccagattggccagtgtggcaaccagatcggagccaagttc
tgggaggtgatcggggaagaacatgggattgactgcgctgggagctactgtgggacgtct
gctctccagctggagaggatcagcgtttactacaacgaagcctacggtaagaagtatgtg
ccgcgagccgtccttgtggacctggaacccgggacaatggacagcatccgatccagcaga
ttgggagtcctctttcagcctgacagttttgttcatggtaactctggtgctggtaacaac
tgggcgaagggccactacacagagggagcggagctgatcgaaaatgtcatggatgtggta
aggagggagagcgagagctgcgactgcctacagggtttccagatcgtgcattctctgggt
ggaggcacgggctcaggcatgggcaccctgctcatgaacaagatcagggaggagtacccg
gatcggatcttgaactcctttagcgtcatgccatcacccaaggtatcagacacggtggta
gagccctacaatgccgtgctatccatccaccagctgatagagaacacagatgcctgcttc
tgcatcgacaacgaagcgctctatgacatttgtttccgcaccctgaggctgacgacaccc
acctacggggatctcaaccacctggtgtccttgaccatgagcggaatcacgacttcactg
cgctttcccggtcagctcaatgcagacctgcgcaagctggccgtgaatatggtgcccttt
cctcgtcttcacttcttcatgcctggcttcgctccactcacagcccagggtagccagcag
taccgagccctctcagtagcggagctcacccaacagatgttcgatgcccgcaacatcatg
gctgcctgtgaccctcgccgcggccgctacctgactgtggcttgtatattccggggtaag
atgtccaccaaggaagtggaccaacagctgctgtccattcagacaaggaacagcaactgc
tttgtggaatggattcccaacaatgtcaaggtagctgtgtgtgacatcccgccccgtggg
ctgaacatggcagctaccttcctgggcaacaatacagccatccaagagctcttcaccagg
gtctctgagcacttctcagctatgttcagaaggagagcttttgtgcactggtacaccagt
gaagggatggacataagtgaatttggggaagctgagagtgatatccatgacctggtgtct
gagtaccaacaattccaagatgtcagagcagggctagaggacagtgaagaggatgtggag
gaggcagaggtggaggcagaagacaaagatcattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (10)   
   KEGG PATHWAY (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (6)   
   Pfam (6)   
All databases (43)   

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